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Carg03275 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg03275
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionphototropin-1-like
Genome locationCarg_Chr20:2178296..2179660
RNA-Seq ExpressionCarg03275
SyntenyCarg03275
Gene Ontology termsGO:0006468 - protein phosphorylation (biological process)
GO:0009785 - blue light signaling pathway (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0004672 - protein kinase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0009882 - blue light photoreceptor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570746.1 Phototropin-1, partial [Cucurbita argyrosperma subsp. sororia]9.2e-11100Show/hide
Query:  HPPELEASLFQTAEPEKDANNKAPDLDVKALDLSVF
        HPPELEASLFQTAEPEKDANNKAPDLDVKALDLSVF
Subjt:  HPPELEASLFQTAEPEKDANNKAPDLDVKALDLSVF
KAG7010592.1 hypothetical protein SDJN02_27386, partial [Cucurbita argyrosperma subsp. argyrosperma]8.0e-31100Show/hide
Query:  MCNSSSSISFSVLNSCRKLLLGLAILVQWTGGLWHPPELEASLFQTAEPEKDANNKAPDLDVKALDLSVF
        MCNSSSSISFSVLNSCRKLLLGLAILVQWTGGLWHPPELEASLFQTAEPEKDANNKAPDLDVKALDLSVF
Subjt:  MCNSSSSISFSVLNSCRKLLLGLAILVQWTGGLWHPPELEASLFQTAEPEKDANNKAPDLDVKALDLSVF
XP_022943391.1 phototropin-1-like [Cucurbita moschata]2.7e-1097.22Show/hide
Query:  HPPELEASLFQTAEPEKDANNKAPDLDVKALDLSVF
        HPPELEASLFQT EPEKDANNKAPDLDVKALDLSVF
Subjt:  HPPELEASLFQTAEPEKDANNKAPDLDVKALDLSVF
XP_022986761.1 phototropin-1-like [Cucurbita maxima]8.6e-0991.67Show/hide
Query:  HPPELEASLFQTAEPEKDANNKAPDLDVKALDLSVF
        HPPELEASLFQ+ EPEKDANNKAP LDVKALDLSVF
Subjt:  HPPELEASLFQTAEPEKDANNKAPDLDVKALDLSVF
XP_023511927.1 phototropin-1-like [Cucurbita pepo subsp. pepo]2.3e-0991.67Show/hide
Query:  HPPELEASLFQTAEPEKDANNKAPDLDVKALDLSVF
        HPPELEASLF T EPEKDANNKAPDLD+KALDLSVF
Subjt:  HPPELEASLFQTAEPEKDANNKAPDLDVKALDLSVF
TrEMBL top hitse value%identityAlignment
A0A6J1FRK8 phototropin-1-like1.3e-1097.22Show/hide
Query:  HPPELEASLFQTAEPEKDANNKAPDLDVKALDLSVF
        HPPELEASLFQT EPEKDANNKAPDLDVKALDLSVF
Subjt:  HPPELEASLFQTAEPEKDANNKAPDLDVKALDLSVF
A0A6J1JC63 phototropin-1-like4.2e-0991.67Show/hide
Query:  HPPELEASLFQTAEPEKDANNKAPDLDVKALDLSVF
        HPPELEASLFQ+ EPEKDANNKAP LDVKALDLSVF
Subjt:  HPPELEASLFQTAEPEKDANNKAPDLDVKALDLSVF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTAACTCGTCGAGTTCTATATCGTTTTCGGTGTTGAATTCTTGCAGGAAATTATTACTGGGGCTGGCCATACTAGTGCAGTGGACTGGTGGGCTTTGGCATCCTCC
CGAGCTCGAAGCGTCTCTTTTCCAGACCGCCGAACCCGAAAAAGATGCTAATAATAAAGCTCCAGATTTGGATGTAAAAGCTCTTGACCTCAGTGTGTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTAACTCGTCGAGTTCTATATCGTTTTCGGTGTTGAATTCTTGCAGGAAATTATTACTGGGGCTGGCCATACTAGTGCAGTGGACTGGTGGGCTTTGGCATCCTCC
CGAGCTCGAAGCGTCTCTTTTCCAGACCGCCGAACCCGAAAAAGATGCTAATAATAAAGCTCCAGATTTGGATGTAAAAGCTCTTGACCTCAGTGTGTTCTGA
Protein sequenceShow/hide protein sequence
MCNSSSSISFSVLNSCRKLLLGLAILVQWTGGLWHPPELEASLFQTAEPEKDANNKAPDLDVKALDLSVF