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Carg03325 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg03325
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRab5-interacting
Genome locationCarg_Chr20:1948612..1950683
RNA-Seq ExpressionCarg03325
SyntenyCarg03325
Gene Ontology termsGO:0006996 - organelle organization (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR010742 - Rab5-interacting protein
IPR029008 - Rab5-interacting protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008464121.1 PREDICTED: uncharacterized protein C20orf24 homolog [Cucumis melo]6.0e-6496.12Show/hide
Query:  MKESKPMKLNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSIVYGYYAMILKVDEEEFGG
        MKE+KP+K NLHQHQDHQNGHLAPFKLAKL DPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTS+VYGYYAMILKVDEEEFGG
Subjt:  MKESKPMKLNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSIVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWILVYSLAHF
        HGALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWILVYSLAHF
XP_022943955.1 uncharacterized protein C20orf24 homolog [Cucurbita moschata]1.9e-6599.22Show/hide
Query:  MKESKPMKLNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSIVYGYYAMILKVDEEEFGG
        MKESKPMKLNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSIV+GYYAMILKVDEEEFGG
Subjt:  MKESKPMKLNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSIVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWILVYSLAHF
        HGALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWILVYSLAHF
XP_022986965.1 uncharacterized protein C20orf24 homolog [Cucurbita maxima]1.4e-6599.22Show/hide
Query:  MKESKPMKLNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSIVYGYYAMILKVDEEEFGG
        MKESKP+KLNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSIVYGYYAMILKVDEEEFGG
Subjt:  MKESKPMKLNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSIVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWILVYSLAHF
        HGALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWILVYSLAHF
XP_023512026.1 uncharacterized protein C20orf24 homolog [Cucurbita pepo subsp. pepo]4.9e-66100Show/hide
Query:  MKESKPMKLNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSIVYGYYAMILKVDEEEFGG
        MKESKPMKLNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSIVYGYYAMILKVDEEEFGG
Subjt:  MKESKPMKLNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSIVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWILVYSLAHF
        HGALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWILVYSLAHF
XP_038900616.1 respirasome Complex Assembly Factor 1-like [Benincasa hispida]5.4e-6597.67Show/hide
Query:  MKESKPMKLNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSIVYGYYAMILKVDEEEFGG
        MKESKP+K NLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTS+VYGYYAMILKVDEEEFGG
Subjt:  MKESKPMKLNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSIVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWILVYSLAHF
        HGALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWILVYSLAHF
TrEMBL top hitse value%identityAlignment
A0A0A0KFE5 Uncharacterized protein3.8e-6495.35Show/hide
Query:  MKESKPMKLNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSIVYGYYAMILKVDEEEFGG
        MKE+KP+K NLHQHQDHQNGHLAPFKLAKL DPEASWDKDQLGDVLHWIRQAVAV+LGLLWGSIPLVGGIWFLIFLAISTS+VYGYYAMILKVDEEEFGG
Subjt:  MKESKPMKLNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSIVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWILVYSLAHF
        HGALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWILVYSLAHF
A0A1S4E4J0 uncharacterized protein C20orf24 homolog2.9e-6496.12Show/hide
Query:  MKESKPMKLNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSIVYGYYAMILKVDEEEFGG
        MKE+KP+K NLHQHQDHQNGHLAPFKLAKL DPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTS+VYGYYAMILKVDEEEFGG
Subjt:  MKESKPMKLNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSIVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWILVYSLAHF
        HGALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWILVYSLAHF
A0A5D3DK85 Rab5-interacting2.9e-6496.12Show/hide
Query:  MKESKPMKLNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSIVYGYYAMILKVDEEEFGG
        MKE+KP+K NLHQHQDHQNGHLAPFKLAKL DPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTS+VYGYYAMILKVDEEEFGG
Subjt:  MKESKPMKLNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSIVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWILVYSLAHF
        HGALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWILVYSLAHF
A0A6J1FYD9 uncharacterized protein C20orf24 homolog9.0e-6699.22Show/hide
Query:  MKESKPMKLNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSIVYGYYAMILKVDEEEFGG
        MKESKPMKLNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSIV+GYYAMILKVDEEEFGG
Subjt:  MKESKPMKLNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSIVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWILVYSLAHF
        HGALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWILVYSLAHF
A0A6J1JFH8 uncharacterized protein C20orf24 homolog6.9e-6699.22Show/hide
Query:  MKESKPMKLNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSIVYGYYAMILKVDEEEFGG
        MKESKP+KLNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSIVYGYYAMILKVDEEEFGG
Subjt:  MKESKPMKLNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSIVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWILVYSLAHF
        HGALLQEGLFASITLFLLAWILVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWILVYSLAHF
SwissProt top hitse value%identityAlignment
Q9BUV8 Respirasome Complex Assembly Factor 15.3e-1537.84Show/hide
Query:  NGHLAPFKLAKLFDPEASW-DKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL
        NG L     +K+   +A+W DKD+  DV++W RQ +AVVLG++WG +PL G +    F  I+  ++Y Y++  L++DEEE+GG   L +EG   S  LF+
Subjt:  NGHLAPFKLAKLFDPEASW-DKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL

Query:  LAWILVYSLAH
        +     ++  H
Subjt:  LAWILVYSLAH
Q9CQT9 Respirasome Complex Assembly Factor 13.9e-1839.29Show/hide
Query:  NGHLAPFKLAKLFDPEASW-DKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL
        NG L     +K+   +A+W DKD+  DV++W RQ +A+VLG++WG +PL G +    F  I+  ++Y Y++  L++DEEE+GG   L +EG   S  LF+
Subjt:  NGHLAPFKLAKLFDPEASW-DKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL

Query:  LAWILVYSLAHF
        + WI+ Y+  H+
Subjt:  LAWILVYSLAHF
Arabidopsis top hitse value%identityAlignment
AT2G29020.1 Rab5-interacting family protein4.4e-4970.68Show/hide
Query:  MKESKPMKLNLHQHQD----HQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSIVYGYYAMILKVDEE
        MKE K  K +  Q Q     HQN HL  F  AKLFD EASWDKDQLGDVLHWIRQ V ++ GLLWG+IPLVGGIW L+FLAIS+ IVYGYYA++LK+DEE
Subjt:  MKESKPMKLNLHQHQD----HQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSIVYGYYAMILKVDEE

Query:  EFGGHGALLQEGLFASITLFLLAWILVYSLAHF
        +FGGH ALLQ+GLFAS++LFLLAWILVYSL+ F
Subjt:  EFGGHGALLQEGLFASITLFLLAWILVYSLAHF
AT5G59410.1 Rab5-interacting family protein1.7e-5681.54Show/hide
Query:  MKESKPMKLN-LHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSIVYGYYAMILKVDEEEFG
        MKESK  KLN L Q ++HQN HL+P KLAKLFDP+ASWDKDQLGDVLHWIRQ V ++ GLLWGSIPLVGGIW ++FLAIS+ IVYGYYAMILKVDEE+FG
Subjt:  MKESKPMKLN-LHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSIVYGYYAMILKVDEEEFG

Query:  GHGALLQEGLFASITLFLLAWILVYSLAHF
        GH ALLQEGLFAS+TLFLLAWILVYSLAHF
Subjt:  GHGALLQEGLFASITLFLLAWILVYSLAHF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGAATCGAAACCGATGAAGCTCAATCTTCATCAGCATCAAGATCACCAAAATGGACACTTGGCTCCGTTCAAGCTCGCTAAATTGTTCGATCCAGAGGCCTCCTG
GGACAAGGACCAACTAGGAGATGTTTTGCACTGGATTCGACAAGCAGTGGCCGTTGTTCTTGGACTTCTGTGGGGATCCATACCTTTGGTTGGAGGCATTTGGTTTCTAA
TTTTCCTGGCGATATCAACCAGCATCGTATATGGATACTATGCGATGATATTGAAAGTTGATGAAGAAGAATTTGGAGGTCATGGAGCTCTTCTCCAAGAGGGCCTTTTC
GCTTCTATAACTCTCTTTCTGCTTGCTTGGATTCTCGTATACAGCTTGGCACACTTTTGA
mRNA sequenceShow/hide mRNA sequence
AAAGCCGAAGCTGAAAAAACCAGACGGGAGACGACACTTTCATGGTTTGCAGTGATTTTGCCGCAAATGAATTCTGCAAATTGAAGTTTCTTCTTCGTTGATCCAATGGT
GTCTGCCTATGTTCTTCCCTGAAAACCCTAGGAGTTACTGAATACAGTGTTTCTGTTCCGACTCGAGCATTTTCTCTTCTCGTATTCAGGAATCTAGATCTAAGCTTACT
GCAGATTCTTCGGTTTTTTCTGTTCTACTTTTATTATATTTCAATTTCCGACGAGTGATTGATTAGATTATCCGGTATGAAAGAATCGAAACCGATGAAGCTCAATCTTC
ATCAGCATCAAGATCACCAAAATGGACACTTGGCTCCGTTCAAGCTCGCTAAATTGTTCGATCCAGAGGCCTCCTGGGACAAGGACCAACTAGGAGATGTTTTGCACTGG
ATTCGACAAGCAGTGGCCGTTGTTCTTGGACTTCTGTGGGGATCCATACCTTTGGTTGGAGGCATTTGGTTTCTAATTTTCCTGGCGATATCAACCAGCATCGTATATGG
ATACTATGCGATGATATTGAAAGTTGATGAAGAAGAATTTGGAGGTCATGGAGCTCTTCTCCAAGAGGGCCTTTTCGCTTCTATAACTCTCTTTCTGCTTGCTTGGATTC
TCGTATACAGCTTGGCACACTTTTGATTGGCAACGAATGAGTTTGCATCCATGAAATCACTTGGTGAAATTCGAACAATGAACTTAGTTATATTGATACCCTGCTCATTT
ACAATTGCTTCTAATTGCTGGCACAATTTTTTTTCACATCATGATGTTGAACAAATTGATTTAGCAGAGCAGGAAAACTCTAGCATCTGATATATGGTGATAATTTTCGA
TTTCCTTTTCGCTTTTGACGTTGTTCCGAGGCCATATAGAAATGGGCTATGGATGTAATCCTTGTTAGAATTAACACCCTTTATTGCCATCCACTAATTACTAGGGAACA
TTATAAATCACTAAACTATAGGGAACAAGAAAGAAGCTTCATTTTCTTTACTTCCTCTCTTAGTATAGCTTTTCTCTGCTTTTTAGGAAAAGAGGGAAAGAAAGGCTGGT
AACTGCCAGGAAGAGCATCGTGAATACTTCGTCGACTGAGGTGGGAGATTCGAATCTTTAATAAGTTTTTATAACTAACTTTTGCTGGTTGAAATGTGCTTATAGAATAG
AATCATTGTTGGGACTCTGTTGTATGTCCAATGTTATTGGTGATGGTTCCTTTTTTTTATGTCTACAGTAGGTAAAATCCTCTTGTATTCCATCTGTAATTAGTTTTCTT
TATTGAAATCTTCTTTAGGCCTATAGTTTTCTTGGTTGAATTCAAGTGAAAGGTTTAAGATATCTTAATCAAAATTGACTG
Protein sequenceShow/hide protein sequence
MKESKPMKLNLHQHQDHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFLIFLAISTSIVYGYYAMILKVDEEEFGGHGALLQEGLF
ASITLFLLAWILVYSLAHF