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Carg03331 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg03331
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr20:1911592..1912126
RNA-Seq ExpressionCarg03331
SyntenyCarg03331
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605444.1 hypothetical protein SDJN03_02761, partial [Cucurbita argyrosperma subsp. sororia]2.6e-2868.24Show/hide
Query:  SCKLP---SLSTPFASSSTLS--PTNISRSESSPAESSKRISIWRLHATSEETLASESAALVEKSKEIVS----GVSTVTSVLLFVAFIGLSILTIGVIY
        S KLP   S S  FASS  LS  P  +   ++ P    +R SI RLHA SEETLASESAALVEKS+EI S    GVST+ SVLLFVAF+GLS+LTIGVIY
Subjt:  SCKLP---SLSTPFASSSTLS--PTNISRSESSPAESSKRISIWRLHATSEETLASESAALVEKSKEIVS----GVSTVTSVLLFVAFIGLSILTIGVIY

Query:  IAVTDFLQKREKEKFEKEEAANNKKSGKRK--KMKAKAGSKGFGQKID
        IAVTDFLQKREKEKFEKEEAA NKKSGK+K  K+KAKAG +GFGQK++
Subjt:  IAVTDFLQKREKEKFEKEEAANNKKSGKRK--KMKAKAGSKGFGQKID

KAG7010536.1 hypothetical protein SDJN02_27330, partial [Cucurbita argyrosperma subsp. argyrosperma]4.4e-60100Show/hide
Query:  MATAISCKLPSLSTPFASSSTLSPTNISRSESSPAESSKRISIWRLHATSEETLASESAALVEKSKEIVSGVSTVTSVLLFVAFIGLSILTIGVIYIAVT
        MATAISCKLPSLSTPFASSSTLSPTNISRSESSPAESSKRISIWRLHATSEETLASESAALVEKSKEIVSGVSTVTSVLLFVAFIGLSILTIGVIYIAVT
Subjt:  MATAISCKLPSLSTPFASSSTLSPTNISRSESSPAESSKRISIWRLHATSEETLASESAALVEKSKEIVSGVSTVTSVLLFVAFIGLSILTIGVIYIAVT

Query:  DFLQKREKEKFEKEEAANNKKSGKRKKMKAKAGSKGFGQKID
        DFLQKREKEKFEKEEAANNKKSGKRKKMKAKAGSKGFGQKID
Subjt:  DFLQKREKEKFEKEEAANNKKSGKRKKMKAKAGSKGFGQKID

XP_022947295.1 uncharacterized protein LOC111451198 [Cucurbita moschata]5.2e-2968.92Show/hide
Query:  SCKLPSL---STPFASSSTLS--PTNISRSESSPAESSKRISIWRLHATSEETLASESAALVEKSKEIVS----GVSTVTSVLLFVAFIGLSILTIGVIY
        S KLPSL   S  FASS  LS  P  +   ++ P    +R SI RLHA SEETLASESAALVEKS+EI S    GVST+ SVLLFVAF+GLS+LTIGVIY
Subjt:  SCKLPSL---STPFASSSTLS--PTNISRSESSPAESSKRISIWRLHATSEETLASESAALVEKSKEIVS----GVSTVTSVLLFVAFIGLSILTIGVIY

Query:  IAVTDFLQKREKEKFEKEEAANNKKSGKRK--KMKAKAGSKGFGQKID
        IAVTDFLQKREKEKFEKEEAA NKKSGK+K  K+KAKAG +GFGQK++
Subjt:  IAVTDFLQKREKEKFEKEEAANNKKSGKRK--KMKAKAGSKGFGQKID

XP_023007015.1 uncharacterized protein LOC111499635 [Cucurbita maxima]2.0e-2868.24Show/hide
Query:  SCKLPSL---STPFASSSTLS--PTNISRSESSPAESSKRISIWRLHATSEETLASESAALVEKSKEIVS----GVSTVTSVLLFVAFIGLSILTIGVIY
        S KLPSL   S  FASS  LS  P  +   ++ P    +R SI RLHA SEETLASESAALVEKS+EI S    GVST+ SVLLFVAF+GLS+LTIGVIY
Subjt:  SCKLPSL---STPFASSSTLS--PTNISRSESSPAESSKRISIWRLHATSEETLASESAALVEKSKEIVS----GVSTVTSVLLFVAFIGLSILTIGVIY

Query:  IAVTDFLQKREKEKFEKEEAANNKKSGKRK--KMKAKAGSKGFGQKID
        IAVTDFLQKREKEKFEKEEAA NKKSGK+K  K+KAK G +GFGQK++
Subjt:  IAVTDFLQKREKEKFEKEEAANNKKSGKRK--KMKAKAGSKGFGQKID

XP_023532311.1 uncharacterized protein LOC111794502 [Cucurbita pepo subsp. pepo]2.0e-2868.49Show/hide
Query:  SCKLPSLSTPFASSSTLSPTNISRSESSPA---ESSKRISIWRLHATSEETLASESAALVEKSKEIVS----GVSTVTSVLLFVAFIGLSILTIGVIYIA
        S KLPSL +  +S+S  S  N+SR   +       S+R SI RLHA SEETLASESAALVEKS+EI S    GVST+ SVLLFVAFIGLS+LTIGVIYIA
Subjt:  SCKLPSLSTPFASSSTLSPTNISRSESSPA---ESSKRISIWRLHATSEETLASESAALVEKSKEIVS----GVSTVTSVLLFVAFIGLSILTIGVIYIA

Query:  VTDFLQKREKEKFEKEEAANNKKSGKRK--KMKAKAGSKGFGQKID
        VTDFLQKREKEKFEKEEAA NKKSGK+K  K+KA+AG +GFGQK++
Subjt:  VTDFLQKREKEKFEKEEAANNKKSGKRK--KMKAKAGSKGFGQKID

TrEMBL top hitse value%identityAlignment
A0A1S3CM77 uncharacterized protein LOC1035020679.3e-2461.7Show/hide
Query:  SLSTPFASSSTLS--PTNISRSESSPAESSKRISIWRLH-ATSEETLASESAALV-EKSKEIV-----SGVSTVTSVLLFVAFIGLSILTIGVIYIAVTD
        S S PF SS+ LS  PT +           K++S   +H ATSE+TLAS+SAALV EKS++IV      GVST+ SVLLF+AFIGLSILTIGVIYI VTD
Subjt:  SLSTPFASSSTLS--PTNISRSESSPAESSKRISIWRLH-ATSEETLASESAALV-EKSKEIV-----SGVSTVTSVLLFVAFIGLSILTIGVIYIAVTD

Query:  FLQKREKEKFEKEEAANNKKSGKRKKMKAKAGSKGFGQKID
        FLQKREKEKFEKEEA   KKSGK+KK++A+ G +GFGQK++
Subjt:  FLQKREKEKFEKEEAANNKKSGKRKKMKAKAGSKGFGQKID

A0A5A7V864 Uncharacterized protein9.3e-2461.7Show/hide
Query:  SLSTPFASSSTLS--PTNISRSESSPAESSKRISIWRLH-ATSEETLASESAALV-EKSKEIV-----SGVSTVTSVLLFVAFIGLSILTIGVIYIAVTD
        S S PF SS+ LS  PT +           K++S   +H ATSE+TLAS+SAALV EKS++IV      GVST+ SVLLF+AFIGLSILTIGVIYI VTD
Subjt:  SLSTPFASSSTLS--PTNISRSESSPAESSKRISIWRLH-ATSEETLASESAALV-EKSKEIV-----SGVSTVTSVLLFVAFIGLSILTIGVIYIAVTD

Query:  FLQKREKEKFEKEEAANNKKSGKRKKMKAKAGSKGFGQKID
        FLQKREKEKFEKEEA   KKSGK+KK++A+ G +GFGQK++
Subjt:  FLQKREKEKFEKEEAANNKKSGKRKKMKAKAGSKGFGQKID

A0A6J1D484 uncharacterized protein LOC1110171131.8e-2761.82Show/hide
Query:  MATAISCKLPSLSTP-FASSSTLSPTNISRSESS---------PA---------ESSKRISIWRLHATSEETLASESAALVEKSKEIVS----GVSTVTS
        MAT IS    SLS P F S+    P    R  SS         PA          S++  SI RLHATSE+TLASESAALVEKS+EI S    GVST+ S
Subjt:  MATAISCKLPSLSTP-FASSSTLSPTNISRSESS---------PA---------ESSKRISIWRLHATSEETLASESAALVEKSKEIVS----GVSTVTS

Query:  VLLFVAFIGLSILTIGVIYIAVTDFLQKREKEKFEKEEAANNKKSGKRKKMKAKAGSKGFGQKID
         LLFVAFIGLSILTIGVIYIAVTDFLQKREKEKFEK E A NKKSGK+KK++A+AG +GFGQKI+
Subjt:  VLLFVAFIGLSILTIGVIYIAVTDFLQKREKEKFEKEEAANNKKSGKRKKMKAKAGSKGFGQKID

A0A6J1G6G9 uncharacterized protein LOC1114511982.5e-2968.92Show/hide
Query:  SCKLPSL---STPFASSSTLS--PTNISRSESSPAESSKRISIWRLHATSEETLASESAALVEKSKEIVS----GVSTVTSVLLFVAFIGLSILTIGVIY
        S KLPSL   S  FASS  LS  P  +   ++ P    +R SI RLHA SEETLASESAALVEKS+EI S    GVST+ SVLLFVAF+GLS+LTIGVIY
Subjt:  SCKLPSL---STPFASSSTLS--PTNISRSESSPAESSKRISIWRLHATSEETLASESAALVEKSKEIVS----GVSTVTSVLLFVAFIGLSILTIGVIY

Query:  IAVTDFLQKREKEKFEKEEAANNKKSGKRK--KMKAKAGSKGFGQKID
        IAVTDFLQKREKEKFEKEEAA NKKSGK+K  K+KAKAG +GFGQK++
Subjt:  IAVTDFLQKREKEKFEKEEAANNKKSGKRK--KMKAKAGSKGFGQKID

A0A6J1L1T3 uncharacterized protein LOC1114996359.7e-2968.24Show/hide
Query:  SCKLPSL---STPFASSSTLS--PTNISRSESSPAESSKRISIWRLHATSEETLASESAALVEKSKEIVS----GVSTVTSVLLFVAFIGLSILTIGVIY
        S KLPSL   S  FASS  LS  P  +   ++ P    +R SI RLHA SEETLASESAALVEKS+EI S    GVST+ SVLLFVAF+GLS+LTIGVIY
Subjt:  SCKLPSL---STPFASSSTLS--PTNISRSESSPAESSKRISIWRLHATSEETLASESAALVEKSKEIVS----GVSTVTSVLLFVAFIGLSILTIGVIY

Query:  IAVTDFLQKREKEKFEKEEAANNKKSGKRK--KMKAKAGSKGFGQKID
        IAVTDFLQKREKEKFEKEEAA NKKSGK+K  K+KAK G +GFGQK++
Subjt:  IAVTDFLQKREKEKFEKEEAANNKKSGKRK--KMKAKAGSKGFGQKID

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G29180.1 unknown protein4.4e-1850.44Show/hide
Query:  KRISIWRLHATSEE--------TLASESAALVEKSKEIVSGVSTVTSVLLFVAFIGLSILTIGVIYIAVTDFLQKREKEKFEKEEAA-NNKKSGKRKKMK
        ++  +WR+ AT EE          +S S A+V    +   GV+ +  VLLFVAF+ L++LTIGV+YI VT+FL KRE+EKFEK+EAA  +KK GK+K M+
Subjt:  KRISIWRLHATSEE--------TLASESAALVEKSKEIVSGVSTVTSVLLFVAFIGLSILTIGVIYIAVTDFLQKREKEKFEKEEAA-NNKKSGKRKKMK

Query:  AKAGSKGFGQKID
        A+AG +GFGQKI+
Subjt:  AKAGSKGFGQKID


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACCGCCATATCTTGCAAGCTTCCTAGTCTATCTACGCCGTTTGCTTCATCCTCTACTCTCTCGCCGACGAACATTTCTCGCTCCGAATCCTCTCCGGCAGAATC
GTCGAAGAGAATCTCAATTTGGAGGCTCCATGCCACATCTGAGGAAACTTTGGCCTCGGAATCCGCCGCACTGGTGGAGAAATCGAAGGAGATAGTGTCCGGCGTTTCCA
CCGTAACATCTGTTCTTCTGTTTGTCGCGTTCATCGGTTTATCGATTCTCACGATTGGGGTAATCTACATTGCTGTGACGGACTTCTTGCAGAAGAGAGAGAAGGAAAAG
TTCGAGAAAGAGGAGGCGGCTAACAACAAGAAGAGTGGGAAAAGGAAGAAGATGAAAGCTAAAGCTGGATCGAAAGGATTCGGCCAGAAGATTGAT
mRNA sequenceShow/hide mRNA sequence
ATGGCCACCGCCATATCTTGCAAGCTTCCTAGTCTATCTACGCCGTTTGCTTCATCCTCTACTCTCTCGCCGACGAACATTTCTCGCTCCGAATCCTCTCCGGCAGAATC
GTCGAAGAGAATCTCAATTTGGAGGCTCCATGCCACATCTGAGGAAACTTTGGCCTCGGAATCCGCCGCACTGGTGGAGAAATCGAAGGAGATAGTGTCCGGCGTTTCCA
CCGTAACATCTGTTCTTCTGTTTGTCGCGTTCATCGGTTTATCGATTCTCACGATTGGGGTAATCTACATTGCTGTGACGGACTTCTTGCAGAAGAGAGAGAAGGAAAAG
TTCGAGAAAGAGGAGGCGGCTAACAACAAGAAGAGTGGGAAAAGGAAGAAGATGAAAGCTAAAGCTGGATCGAAAGGATTCGGCCAGAAGATTGAT
Protein sequenceShow/hide protein sequence
MATAISCKLPSLSTPFASSSTLSPTNISRSESSPAESSKRISIWRLHATSEETLASESAALVEKSKEIVSGVSTVTSVLLFVAFIGLSILTIGVIYIAVTDFLQKREKEK
FEKEEAANNKKSGKRKKMKAKAGSKGFGQKID