CuGenDBv2

Gene ID	Carg03365
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	30S ribosomal protein S18
Genome location	Carg_Chr20:1740359..1744216
RNA-Seq Expression	Carg03365
Synteny	Carg03365
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005763 - mitochondrial small ribosomal subunit (cellular component) GO:0003729 - mRNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function) GO:0070181 - small ribosomal subunit rRNA binding (molecular function)
InterPro domains	IPR001648 - Ribosomal protein S18 IPR036870 - Ribosomal protein S18 superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6570652.1 hypothetical protein SDJN03_29567, partial [Cucurbita argyrosperma subsp. sororia]

1.1e-141

98.5

Show/hide

Query:  MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLYG
        MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGD GNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLYG
Subjt:  MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLYG

Query:  LDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYE--DLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIII
        LDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYE  DLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIII
Subjt:  LDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYE--DLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIII

Query:  KRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEIFDNNDGERPLGS
        KRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYE+FDNNDGERPLGS
Subjt:  KRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEIFDNNDGERPLGS

KAG7010502.1 rpsR [Cucurbita argyrosperma subsp. argyrosperma]

5.4e-144

100

Show/hide

Query:  MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLYG
        MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLYG
Subjt:  MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLYG

Query:  LDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYEDLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIIIKR
        LDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYEDLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIIIKR
Subjt:  LDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYEDLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIIIKR

Query:  SKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEIFDNNDGERPLGS
        SKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEIFDNNDGERPLGS
Subjt:  SKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEIFDNNDGERPLGS

XP_022943865.1 uncharacterized protein LOC111448465 [Cucurbita moschata]

8.6e-142

98.5

Show/hide

Query:  MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLYG
        MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLYG
Subjt:  MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLYG

Query:  LDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYE--DLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIII
        LDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYE  DLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIII
Subjt:  LDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYE--DLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIII

Query:  KRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEIFDNNDGERPLGS
        KRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYE+FDNNDGE PLGS
Subjt:  KRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEIFDNNDGERPLGS

XP_022986919.1 uncharacterized protein LOC111484513 [Cucurbita maxima]

4.0e-139

96.63

Show/hide

Query:  MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLYG
        M TVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVS GDSGNDAFFEKLDR+GKPRERIGSRLSGGNNFQ+LYG
Subjt:  MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLYG

Query:  LDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYE--DLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIII
        LDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYE  DLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIII
Subjt:  LDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYE--DLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIII

Query:  KRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEIFDNNDGERPLGS
        KRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYE+FDNNDG  PLGS
Subjt:  KRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEIFDNNDGERPLGS

XP_023512473.1 uncharacterized protein LOC111777218 [Cucurbita pepo subsp. pepo]

1.4e-139

97.38

Show/hide

Query:  MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLYG
        MRTVQVALRTLG GLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDR+GKPRERIGSRLSGGNNFQSLYG
Subjt:  MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLYG

Query:  LDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYE--DLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIII
        LDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYE  DLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIII
Subjt:  LDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYE--DLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIII

Query:  KRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEIFDNNDGERPLGS
        KRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYE+FDNNDG  PLGS
Subjt:  KRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEIFDNNDGERPLGS

TrEMBL top hits

e value

%identity

Alignment

A0A6J1D4R9 uncharacterized protein LOC111017003

1.1e-123

87.08

Show/hide

Query:  MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDD-KGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLY
        MRTVQ ALR+LGGGLS+RFKQ S+LR+LSTNAAR++GFDD K KPDSFESADDFERRIFGGVS  DSGN+AFFEKLDR+GKPRER+GSRLSGGNNFQ+LY
Subjt:  MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDD-KGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLY

Query:  GLDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYE--DLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGII
        GLDD LNTLSDGMDGKLKKA+TYFEFD EEI+KDDYTFRADMSFKPGSTYE  DLDL KPGVRKPPKRVEFQVTTEEVL+KADFRNVRFLANFITDAGII
Subjt:  GLDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYE--DLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGII

Query:  IKRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEIFDNN---DGERPLGS
         KRSKT ISAKAQRKVAREIKTARAFGLMPFTTMGTK+FVFGKTMEDLDKDYEYE+FDN    D   PLGS
Subjt:  IKRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEIFDNN---DGERPLGS

A0A6J1FYC1 uncharacterized protein LOC111448465

4.1e-142

98.5

Show/hide

Query:  MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLYG
        MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLYG
Subjt:  MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLYG

Query:  LDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYE--DLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIII
        LDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYE  DLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIII
Subjt:  LDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYE--DLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIII

Query:  KRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEIFDNNDGERPLGS
        KRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYE+FDNNDGE PLGS
Subjt:  KRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEIFDNNDGERPLGS

A0A6J1G586 uncharacterized protein LOC111451027 isoform X1

8.4e-127

88.52

Show/hide

Query:  MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLYG
        MR VQVA RT+GGG++R+FKQPS LRNLSTNAARD  FDD+GK +SFESADDFERRIFGGVS GDSGNDAFFEKLDR+GKPRERIGSRLSGGNNFQ+LYG
Subjt:  MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLYG

Query:  LDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYE--DLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIII
        ++DNLNTLSDGMDGKLKKASTYFEFD EEIAKDDYTFRADMSFKPGSTYE  DLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGII 
Subjt:  LDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYE--DLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIII

Query:  KRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEIFDNN---DGERPLGS
        KRSKT ISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTME LDKDYEYE+F+NN   D  RP GS
Subjt:  KRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEIFDNN---DGERPLGS

A0A6J1JHF0 uncharacterized protein LOC111484513

1.9e-139

96.63

Show/hide

Query:  MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLYG
        M TVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVS GDSGNDAFFEKLDR+GKPRERIGSRLSGGNNFQ+LYG
Subjt:  MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLYG

Query:  LDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYE--DLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIII
        LDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYE  DLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIII
Subjt:  LDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYE--DLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIII

Query:  KRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEIFDNNDGERPLGS
        KRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYE+FDNNDG  PLGS
Subjt:  KRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEIFDNNDGERPLGS

A0A6J1KYL3 LOW QUALITY PROTEIN: uncharacterized protein LOC111499912

9.9e-120

87.02

Show/hide

Query:  RTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLYGLDDNLNTL
        RT+GGG++R+FKQPS LRNLSTNAARD  FDD+GK +SFESADDFERRIFGGVS GDSGNDAFFEKLDR+GKPRERIGSRLSGGNNFQ+LYG++DNLNTL
Subjt:  RTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLYGLDDNLNTL

Query:  SDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYE--DLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIIIKRSKTRIS
        SDGMDGKLKKASTYFEFD EEIAKDDYTFRADMSFKPGSTYE  DLDLTKPGVRK PKRVEF V TEEVLR ADFRNVRFLANFITDAGII KRSKT IS
Subjt:  SDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYE--DLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIIIKRSKTRIS

Query:  AKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEIFDNN---DGERPLGS
        AKAQRKVAREIKTARAFGLMP TTMGTKSFVFGKTME LDKDYEYE+F+NN   D  RP GS
Subjt:  AKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEIFDNN---DGERPLGS

SwissProt top hits

e value

%identity

Alignment

C1CXK0 30S ribosomal protein S18

1.6e-05

37.84

Show/hide

Query:  GVRKP--PKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIIIKRSKTRISAKAQRKVAREIKTARAFGLMPFT
        G ++P  PK   F +   E+    D+++V+ L  F++D G I+ R +T +SAK QR++A+ IK AR   L+P+T
Subjt:  GVRKP--PKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIIIKRSKTRISAKAQRKVAREIKTARAFGLMPFT

P62659 30S ribosomal protein S18

1.4e-06

40.54

Show/hide

Query:  KPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIIIKRSKTRISAKAQRKVAREIKTARAFGLMPFT
        K   R+P ++ + + T  E     D+RNV  L  F+++ G I+ R +T +SAK QR +A+ IK AR  GL+PFT
Subjt:  KPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIIIKRSKTRISAKAQRKVAREIKTARAFGLMPFT

P80382 30S ribosomal protein S18

4.2e-06

39.19

Show/hide

Query:  KPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIIIKRSKTRISAKAQRKVAREIKTARAFGLMPFT
        K   R+P ++ + + T  E     D+RNV  L  F+++ G I+ R +T +S K QR +A+ IK AR  GL+PFT
Subjt:  KPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIIIKRSKTRISAKAQRKVAREIKTARAFGLMPFT

Q5SLQ0 30S ribosomal protein S18

1.4e-06

40.54

Show/hide

Query:  KPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIIIKRSKTRISAKAQRKVAREIKTARAFGLMPFT
        K   R+P ++ + + T  E     D+RNV  L  F+++ G I+ R +T +SAK QR +A+ IK AR  GL+PFT
Subjt:  KPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIIIKRSKTRISAKAQRKVAREIKTARAFGLMPFT

Q9RY50 30S ribosomal protein S18

1.6e-05

37.84

Show/hide

Query:  GVRKP--PKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIIIKRSKTRISAKAQRKVAREIKTARAFGLMPFT
        G ++P  PK   F +   E+    D+++V+ L  F++D G I+ R +T +SAK QR++A+ IK AR   L+P+T
Subjt:  GVRKP--PKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIIIKRSKTRISAKAQRKVAREIKTARAFGLMPFT

Arabidopsis top hits

e value

%identity

Alignment

AT1G07210.1 Ribosomal protein S18

1.7e-47

45.49

Show/hide

Query:  MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERI-------GSRLSGGN
        M   + A R+L      R  +P V R+L+TNA      D      SF+S+D+ +  +FG  +  D  ++ FF+ L +  K +          GSR SGG 
Subjt:  MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERI-------GSRLSGGN

Query:  NFQSLYGLDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPG-STYEDLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFIT
        +       D+  +  SDG+DGKLK+A+  +  D  +  K +Y+FR D +   G + +  +       R+   + E  VTTEEVL+ ADFRNVRFLANFIT
Subjt:  NFQSLYGLDDNLNTLSDGMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPG-STYEDLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFIT

Query:  DAGIIIKRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEIFDNND
        +AGIIIKR +T ISAKAQRK+AREIKTARAFGLMPFTTMGTK+F FGKTME+ D+D+EYE+ D++D
Subjt:  DAGIIIKRSKTRISAKAQRKVAREIKTARAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEIFDNND

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAGAACCGTTCAGGTTGCTTTGCGAACCCTTGGTGGAGGCTTATCGCGGAGATTTAAGCAACCTTCTGTGCTCAGAAACCTCTCCACAAACGCCGCTCGTGACAGTGG
CTTTGATGATAAGGGAAAACCTGATTCGTTTGAGTCTGCTGATGACTTTGAACGTCGGATATTCGGGGGTGTTTCTACGGGCGATTCCGGAAATGATGCTTTCTTTGAGA
AGCTTGATAGAATTGGCAAACCTCGTGAAAGAATAGGTTCGCGACTGAGTGGAGGAAACAATTTTCAGTCGCTGTATGGGCTTGATGATAATCTTAACACGCTATCAGAT
GGGATGGATGGCAAGTTGAAGAAAGCTTCCACTTATTTTGAGTTTGATACCGAGGAAATTGCAAAAGACGATTATACATTCAGAGCAGATATGTCTTTTAAGCCTGGATC
AACATACGAAGATCTGGATCTAACGAAGCCAGGTGTACGCAAACCTCCGAAAAGGGTTGAGTTTCAGGTGACAACTGAGGAGGTCTTAAGAAAAGCTGATTTCAGGAATG
TTAGGTTTCTGGCAAACTTTATTACCGACGCCGGGATCATTATCAAGAGGAGTAAGACCCGAATTAGTGCCAAGGCACAGAGGAAAGTTGCGCGCGAGATCAAAACTGCA
CGGGCATTTGGCTTAATGCCCTTCACGACAATGGGAACCAAATCATTTGTTTTTGGAAAAACCATGGAGGATCTTGATAAGGACTATGAGTATGAAATTTTCGACAACAA
TGATGGAGAACGCCCGCTCGGATCCTAG

mRNA sequence

Show/hide mRNA sequence

CACTAACCGGCGGCAGCTGAAAGAGCAACCCTACTGGATTCAATTCAAACTTCGGTTTCATTTCAAGCTTTCGCACCCAGTGGTCTTCCTCTTCTTAGGCTCTGCTAATT
TTCGTTCTGTGCGAAATGAGAACCGTTCAGGTTGCTTTGCGAACCCTTGGTGGAGGCTTATCGCGGAGATTTAAGCAACCTTCTGTGCTCAGAAACCTCTCCACAAACGC
CGCTCGTGACAGTGGCTTTGATGATAAGGGAAAACCTGATTCGTTTGAGTCTGCTGATGACTTTGAACGTCGGATATTCGGGGGTGTTTCTACGGGCGATTCCGGAAATG
ATGCTTTCTTTGAGAAGCTTGATAGAATTGGCAAACCTCGTGAAAGAATAGGTTCGCGACTGAGTGGAGGAAACAATTTTCAGTCGCTGTATGGGCTTGATGATAATCTT
AACACGCTATCAGATGGGATGGATGGCAAGTTGAAGAAAGCTTCCACTTATTTTGAGTTTGATACCGAGGAAATTGCAAAAGACGATTATACATTCAGAGCAGATATGTC
TTTTAAGCCTGGATCAACATACGAAGATCTGGATCTAACGAAGCCAGGTGTACGCAAACCTCCGAAAAGGGTTGAGTTTCAGGTGACAACTGAGGAGGTCTTAAGAAAAG
CTGATTTCAGGAATGTTAGGTTTCTGGCAAACTTTATTACCGACGCCGGGATCATTATCAAGAGGAGTAAGACCCGAATTAGTGCCAAGGCACAGAGGAAAGTTGCGCGC
GAGATCAAAACTGCACGGGCATTTGGCTTAATGCCCTTCACGACAATGGGAACCAAATCATTTGTTTTTGGAAAAACCATGGAGGATCTTGATAAGGACTATGAGTATGA
AATTTTCGACAACAATGATGGAGAACGCCCGCTCGGATCCTAGACACCATGCTTTTAGATGGTTTGTGAATTATTTCCCTCACCCTTGTCTTTGATCCAACCATTATCTC
AAACATTACATGACTGAACTTGTTCTGATTGCTGATTATCATCCTGCCTCAAGTCCCCAGAGTCCATCTTGCAAATTTGTTCATGCAGGAAGATATTTCAAAAACCTAAT
AGTCATAGCCTTCTCATCGAGATATTCTTAAATTTTGTTTTATATATTGAATTTCTGGTTAGGAGCCATATACTATAATTTGCGTATTTGTTTTTCTTCTACGGTATATT
ATGTATCGATGAGGTAACTCATCAGCCATAAATTGGAACAGTTTGTTAGTTTTCCTCCATTGACGTGTTAGGCAGAATAAAATGATGGCTGCTTTTGTTTCGAATCAATG
GCATATTAACAGAACACTGGAGCTGGAGCGAAAATTTTCATAAACTATTAGTTTGCATTTGATCTCGGATATTGATGTTGAACCAACCCGTGTTTTTTCTTGGTTCCTTG
TTCGAATCAATCAGGAGATGAAATTCAGAGTCGTTGCTAGGGCTAGTGATGAGATTCGGGGTCGTTGCTAGAACTTGTGGAAATGAAAGACGTTGCTACCTTGCCAATGG
CTGGTAGCTTCAAAGGGCAAGTTTAATTCTAAGCATATATCTGCATCCACTGACATTGTCATCGTGACAAAGCTAAGCGGCCAAAGGGCATAGACATCTCGGTTTTAGTC
CGTGCACAAATATCGCGAACATTTAAGCAAATAAAGAGGAGCAAAAATGATTTAGCTACAAAGTACACGTTTTAACCCATTAAACTATATGGATCATATTTGGGTTAAGA
GTACCAGTTAAACTATATAGATCATATTTGGGTTAAGAGTACCAGTTTTAACCCGTTAAACTATTTCCAAAAATTAACGATCAAAGACAAAAATTAACGATCAAGGACTC
GCCTGGAACTAAGAACAACCCAGATCTAAATAACGATCAAGGACTCACCTGGAACTAAGAACAACCCAGATCTAAATAACCATCAAGGACTCGCCTGGAACTAAGAACAA
CCCAGATCTAAATAACCATCAAGGACCCACTTTTAA

Protein sequence

Show/hide protein sequence

MRTVQVALRTLGGGLSRRFKQPSVLRNLSTNAARDSGFDDKGKPDSFESADDFERRIFGGVSTGDSGNDAFFEKLDRIGKPRERIGSRLSGGNNFQSLYGLDDNLNTLSD
GMDGKLKKASTYFEFDTEEIAKDDYTFRADMSFKPGSTYEDLDLTKPGVRKPPKRVEFQVTTEEVLRKADFRNVRFLANFITDAGIIIKRSKTRISAKAQRKVAREIKTA
RAFGLMPFTTMGTKSFVFGKTMEDLDKDYEYEIFDNNDGERPLGS

Carg03365 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome