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Carg03386 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg03386
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr20:1610972..1614405
RNA-Seq ExpressionCarg03386
SyntenyCarg03386
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010481.1 hypothetical protein SDJN02_27275, partial [Cucurbita argyrosperma subsp. argyrosperma]3.0e-56100Show/hide
Query:  MITSTPLSRFGKTPRRRRKMLLRSGVCFGSFSRCCEWWSSRIIDQSLTATHALNNDVKVTVDKFRPLFYITRKRPRIEPNPLMILMGMLSTLILDLSGTS
        MITSTPLSRFGKTPRRRRKMLLRSGVCFGSFSRCCEWWSSRIIDQSLTATHALNNDVKVTVDKFRPLFYITRKRPRIEPNPLMILMGMLSTLILDLSGTS
Subjt:  MITSTPLSRFGKTPRRRRKMLLRSGVCFGSFSRCCEWWSSRIIDQSLTATHALNNDVKVTVDKFRPLFYITRKRPRIEPNPLMILMGMLSTLILDLSGTS

Query:  TARSIEFGEYSL
        TARSIEFGEYSL
Subjt:  TARSIEFGEYSL
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCACTAGTACGCCTCTCTCAAGGTTCGGGAAAACTCCGAGAAGGCGAAGAAAGATGCTACTCAGAAGCGGTGTGTGTTTCGGATCTTTTAGTCGATGCTGTGAATG
GTGGAGTTCAAGAATCATCGATCAATCCCTCACCGCCACTCACGCTCTGAACAACGATGTTAAGGTGACTGTTGACAAATTTCGGCCATTATTTTACATCACAAGAAAGA
GGCCCAGGATTGAGCCGAACCCGCTGATGATTCTGATGGGAATGCTTTCTACGTTAATTCTGGATTTATCTGGGACCTCAACAGCACGGAGCATTGAATTTGGAGAATAC
TCACTC
mRNA sequenceShow/hide mRNA sequence
TTTCGCGCCAGACATGAATTCTCCGTGAAGTTCATCTTGGCCGCAACTCCCTGTAGCGCCTAATCGCGGGAAATTTCGATCGGAGATGGATATATTGAGCGCCGAGGTTG
GAGGATTGGAAGCTTCATTGCTTCGAATGGTCAATGATCACTAGTACGCCTCTCTCAAGGTTCGGGAAAACTCCGAGAAGGCGAAGAAAGATGCTACTCAGAAGCGGTGT
GTGTTTCGGATCTTTTAGTCGATGCTGTGAATGGTGGAGTTCAAGAATCATCGATCAATCCCTCACCGCCACTCACGCTCTGAACAACGATGTTAAGGTGACTGTTGACA
AATTTCGGCCATTATTTTACATCACAAGAAAGAGGCCCAGGATTGAGCCGAACCCGCTGATGATTCTGATGGGAATGCTTTCTACGTTAATTCTGGATTTATCTGGGACC
TCAACAGCACGGAGCATTGAATTTGGAGAATACTCACTC
Protein sequenceShow/hide protein sequence
MITSTPLSRFGKTPRRRRKMLLRSGVCFGSFSRCCEWWSSRIIDQSLTATHALNNDVKVTVDKFRPLFYITRKRPRIEPNPLMILMGMLSTLILDLSGTSTARSIEFGEY
SL