; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg03415 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg03415
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionMyb family transcription factor-related protein
Genome locationCarg_Chr20:1458214..1461330
RNA-Seq ExpressionCarg03415
SyntenyCarg03415
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR006447 - Myb domain, plants
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain
IPR044848 - PHR1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570602.1 Myb family transcription factor IPN2, partial [Cucurbita argyrosperma subsp. sororia]3.4e-41100Show/hide
Query:  MFHTTKKPSSMTPHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ
        MFHTTKKPSSMTPHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ
Subjt:  MFHTTKKPSSMTPHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ

KAG7010453.1 Myb family transcription factor APL [Cucurbita argyrosperma subsp. argyrosperma]2.1e-75100Show/hide
Query:  MFHTTKKPSSMTPHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQWSFNILFSLNGSSEVQA
        MFHTTKKPSSMTPHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQWSFNILFSLNGSSEVQA
Subjt:  MFHTTKKPSSMTPHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQWSFNILFSLNGSSEVQA

Query:  RETTPQRIQRSIDKGWHESFRHGTSEKQWIFFDLNGA
        RETTPQRIQRSIDKGWHESFRHGTSEKQWIFFDLNGA
Subjt:  RETTPQRIQRSIDKGWHESFRHGTSEKQWIFFDLNGA

XP_022943792.1 myb family transcription factor APL-like [Cucurbita moschata]3.4e-41100Show/hide
Query:  MFHTTKKPSSMTPHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ
        MFHTTKKPSSMTPHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ
Subjt:  MFHTTKKPSSMTPHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ

XP_022985858.1 myb family transcription factor APL-like [Cucurbita maxima]3.4e-41100Show/hide
Query:  MFHTTKKPSSMTPHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ
        MFHTTKKPSSMTPHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ
Subjt:  MFHTTKKPSSMTPHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ

XP_023511848.1 myb family transcription factor APL-like [Cucurbita pepo subsp. pepo]3.4e-41100Show/hide
Query:  MFHTTKKPSSMTPHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ
        MFHTTKKPSSMTPHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ
Subjt:  MFHTTKKPSSMTPHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ

TrEMBL top hitse value%identityAlignment
A0A1S3C2G3 myb family transcription factor APL-like4.5e-3996.39Show/hide
Query:  MFHTTKKPSSMTPHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ
        MFH TKKPSSMT HDR MCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ
Subjt:  MFHTTKKPSSMTPHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ

A0A5D3B9J4 Myb family transcription factor APL-like4.5e-3996.39Show/hide
Query:  MFHTTKKPSSMTPHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ
        MFH TKKPSSMT HDR MCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ
Subjt:  MFHTTKKPSSMTPHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ

A0A6J1FU09 myb family transcription factor APL-like1.6e-41100Show/hide
Query:  MFHTTKKPSSMTPHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ
        MFHTTKKPSSMTPHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ
Subjt:  MFHTTKKPSSMTPHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ

A0A6J1JEU6 myb family transcription factor APL-like1.6e-41100Show/hide
Query:  MFHTTKKPSSMTPHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ
        MFHTTKKPSSMTPHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ
Subjt:  MFHTTKKPSSMTPHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ

A0A6J1L2B8 myb family transcription factor APL1.3e-3896.43Show/hide
Query:  MFHTTKKPSSMT-PHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ
        MFH TKKPSSMT  HDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ
Subjt:  MFHTTKKPSSMT-PHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ

SwissProt top hitse value%identityAlignment
E5L8F7 Myb family transcription factor IPN27.3e-3996.15Show/hide
Query:  KKPSSMTPHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ
        KKPS+M  HDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ
Subjt:  KKPSSMTPHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ

Q8LAJ7 Protein PHR1-LIKE 34.9e-2793.44Show/hide
Query:  DSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ
        D+ LVLTTDPKPRLRWT ELHERFVDAVTQLGGPDKATPKTIMR MGVKGLTLYHLKSHLQ
Subjt:  DSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ

Q8VYI2 Myb family transcription factor PHL122.2e-2795Show/hide
Query:  SGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ
        SGLVLTTDPKPRLRWT ELHERFVDAVT LGGP+KATPKTIMRVMGVKGLTLYHLKSHLQ
Subjt:  SGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ

Q94A57 Protein PHR1-LIKE 25.8e-2893.55Show/hide
Query:  GDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ
        GD+ LVLTTDPKPRLRWT ELHERFVDAVTQLGGPDKATPKTIMR MGVKGLTLYHLKSHLQ
Subjt:  GDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ

Q9SAK5 Myb family transcription factor APL1.7e-3588.24Show/hide
Query:  MFHTTKKPSSM--TPHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ
        MFH  KKPSSM  +  +R MCVQGDSGLVLTTDPKPRLRWTVELHERFVDAV QLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ
Subjt:  MFHTTKKPSSM--TPHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ

Arabidopsis top hitse value%identityAlignment
AT1G79430.2 Homeodomain-like superfamily protein1.2e-3688.24Show/hide
Query:  MFHTTKKPSSM--TPHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ
        MFH  KKPSSM  +  +R MCVQGDSGLVLTTDPKPRLRWTVELHERFVDAV QLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ
Subjt:  MFHTTKKPSSM--TPHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ

AT3G12730.1 Homeodomain-like superfamily protein1.6e-2895Show/hide
Query:  SGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ
        SGLVLTTDPKPRLRWT ELHERFVDAVT LGGP+KATPKTIMRVMGVKGLTLYHLKSHLQ
Subjt:  SGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ

AT3G24120.1 Homeodomain-like superfamily protein4.1e-2993.55Show/hide
Query:  GDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ
        GD+ LVLTTDPKPRLRWT ELHERFVDAVTQLGGPDKATPKTIMR MGVKGLTLYHLKSHLQ
Subjt:  GDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ

AT3G24120.2 Homeodomain-like superfamily protein4.1e-2993.55Show/hide
Query:  GDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ
        GD+ LVLTTDPKPRLRWT ELHERFVDAVTQLGGPDKATPKTIMR MGVKGLTLYHLKSHLQ
Subjt:  GDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ

AT4G13640.1 Homeodomain-like superfamily protein3.5e-2893.44Show/hide
Query:  DSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ
        D+ LVLTTDPKPRLRWT ELHERFVDAVTQLGGPDKATPKTIMR MGVKGLTLYHLKSHLQ
Subjt:  DSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCCATACCACCAAGAAGCCCTCCTCTATGACTCCTCATGATAGGCCAATGTGTGTCCAAGGAGATTCTGGTCTCGTCCTCACCACCGACCCCAAACCCCGTCTCCG
TTGGACCGTCGAGCTCCATGAGCGCTTCGTCGATGCTGTCACTCAGCTCGGAGGCCCTGATAAGGCCACTCCCAAGACGATCATGAGGGTCATGGGCGTCAAGGGCCTCA
CCCTCTACCATCTCAAGAGCCACCTCCAGTGGTCGTTTAACATCCTCTTCTCTCTAAACGGGAGTTCAGAAGTTCAGGCTCGGGAAACAACCCCACAAAGAATTCAACGA
TCAATCGATAAAGGATGGCATGAGAGCTTCCGCCATGGAACTTCAGAGAAACAGTGGATCTTCTTCGACCTTAATGGAGCGTAG
mRNA sequenceShow/hide mRNA sequence
TTGTTCTTGAATCTCCCAAGTATTCCCATTCCCACACAGAGATCTGTGAGGCTGAGCTGCTGAGAGAGCGTAGAGAAGAGAGAAATTGAGAATGTTCCATACCACCAAGA
AGCCCTCCTCTATGACTCCTCATGATAGGCCAATGTGTGTCCAAGGAGATTCTGGTCTCGTCCTCACCACCGACCCCAAACCCCGTCTCCGTTGGACCGTCGAGCTCCAT
GAGCGCTTCGTCGATGCTGTCACTCAGCTCGGAGGCCCTGATAAGGCCACTCCCAAGACGATCATGAGGGTCATGGGCGTCAAGGGCCTCACCCTCTACCATCTCAAGAG
CCACCTCCAGTGGTCGTTTAACATCCTCTTCTCTCTAAACGGGAGTTCAGAAGTTCAGGCTCGGGAAACAACCCCACAAAGAATTCAACGATCAATCGATAAAGGATGGC
ATGAGAGCTTCCGCCATGGAACTTCAGAGAAACAGTGGATCTTCTTCGACCTTAATGGAGCGTAGTATGAACGAAATGCAATTGGAAGTTCAGAGACGGCTGCATGAACA
AATTGAGGTACAAAGACACCTTCAATTGAGAATTGAAGCTCAAGGCAAGTACATGCAAAGCATATTGGAGAAAGCTTGCCAAACCCTAGCCGGCGAAAACATGGCCGTCG
CCAGCACCGCCGCCGGACCTTTCAAAACCACTTCCAACAATATGGGAACAACCAGTACCAACCTTGTTCCAGACACCGCCATCAAAGACTTCATTTCACCTCATCCACCT
CACACCTTCCCTCCTTTTCAAGACATGAACAACCTATTTACCTCCGAACCGCCGCCGCCTCCCCCGCCTCTCATCGACTGCCTCAAGAAGCCTAGCCCCTTCATCTCTGG
AGCTGGTAAGGCCCCCATTTTCTGGCCCGACGATCTCCGACTCCAGCACTTAGGAACCCCTTCAGCCACCTTAGTACCGCCGCCGCCTTCCATTGGCAGCCCACCGGACT
TGGACTCTCTACAACTGGAAATGTATGAATCAAAACCGCCACCCCTGTCACCGCTGCTCGTTGGCAACGACGTGATCAATGAAAAGAAGTTTGAAGCATCGGTAAAGCTT
GAGAGGCCGTCGCCACGGCAGTCGTCGGGACACTCCGACGAAAGGGTGAATAATAATAATAACGGTATGCCCAACAAATGTAACTAATTAAATATAAGATTAGGGTTTAG
ATCTTAACAAATGCTCATACTCATTATTATGTTTGAATATTTTGCTCTGAGAAATGTGAAGTACGAAAATTTGAATTTTCGACTTCAAGAAAATGAATACATGTTTATGT
GATCACATTTTTTCGTGTTTTTAGAATCATCGAGATAGTTATTCT
Protein sequenceShow/hide protein sequence
MFHTTKKPSSMTPHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQWSFNILFSLNGSSEVQARETTPQRIQR
SIDKGWHESFRHGTSEKQWIFFDLNGA