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Carg03419 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg03419
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPUA domain-containing protein
Genome locationCarg_Chr20:1436653..1437238
RNA-Seq ExpressionCarg03419
SyntenyCarg03419
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR002478 - PUA domain
IPR015947 - PUA-like superfamily
IPR036974 - PUA domain superfamily
IPR041532 - RlmI, PUA-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570599.1 hypothetical protein SDJN03_29514, partial [Cucurbita argyrosperma subsp. sororia]3.4e-4577.7Show/hide
Query:  MQQLQARLLKSLSISSSPAASTIQEIASARPKGQSVICIPRLRPAKRYRLSQFVYVSSPHLASGLSKVVLKKGKTQLFKDGSPMVYSGAVDRIIGRPPPK
        MQQLQARLLKSLSISSSPAASTIQEIASARPK                               GLSKVVLKKGKTQLFKDGSPMVYSGAVDRIIGRPPPK
Subjt:  MQQLQARLLKSLSISSSPAASTIQEIASARPKGQSVICIPRLRPAKRYRLSQFVYVSSPHLASGLSKVVLKKGKTQLFKDGSPMVYSGAVDRIIGRPPPK

Query:  TGDVVLVADGAEKPIGWGLYNSVSMFSVRLMQLEEEAAR
        TGDVVLVADGAEKPIGWGLYNSVSMFSVRLMQLEEEAAR
Subjt:  TGDVVLVADGAEKPIGWGLYNSVSMFSVRLMQLEEEAAR
KAG7010449.1 hypothetical protein SDJN02_27242, partial [Cucurbita argyrosperma subsp. argyrosperma]3.9e-81100Show/hide
Query:  MQQLQARLLKSLSISSSPAASTIQEIASARPKGQSVICIPRLRPAKRYRLSQFVYVSSPHLASGLSKVVLKKGKTQLFKDGSPMVYSGAVDRIIGRPPPK
        MQQLQARLLKSLSISSSPAASTIQEIASARPKGQSVICIPRLRPAKRYRLSQFVYVSSPHLASGLSKVVLKKGKTQLFKDGSPMVYSGAVDRIIGRPPPK
Subjt:  MQQLQARLLKSLSISSSPAASTIQEIASARPKGQSVICIPRLRPAKRYRLSQFVYVSSPHLASGLSKVVLKKGKTQLFKDGSPMVYSGAVDRIIGRPPPK

Query:  TGDVVLVADGAEKPIGWGLYNSVSMFSVRLMQLEEEAARYLIGQCLNSVTNITFYMWC
        TGDVVLVADGAEKPIGWGLYNSVSMFSVRLMQLEEEAARYLIGQCLNSVTNITFYMWC
Subjt:  TGDVVLVADGAEKPIGWGLYNSVSMFSVRLMQLEEEAARYLIGQCLNSVTNITFYMWC
XP_022943486.1 uncharacterized protein LOC111448241 [Cucurbita moschata]4.4e-4576.98Show/hide
Query:  MQQLQARLLKSLSISSSPAASTIQEIASARPKGQSVICIPRLRPAKRYRLSQFVYVSSPHLASGLSKVVLKKGKTQLFKDGSPMVYSGAVDRIIGRPPPK
        MQQLQARLLKSLSISSSPAASTIQEIASARPK                               GLSKVVLKKGKTQLFKDGSPMVYSGA+DRIIGRPPPK
Subjt:  MQQLQARLLKSLSISSSPAASTIQEIASARPKGQSVICIPRLRPAKRYRLSQFVYVSSPHLASGLSKVVLKKGKTQLFKDGSPMVYSGAVDRIIGRPPPK

Query:  TGDVVLVADGAEKPIGWGLYNSVSMFSVRLMQLEEEAAR
        TGDVVLVADGAEKPIGWGLYNSVSMFSVRLMQLEEEAAR
Subjt:  TGDVVLVADGAEKPIGWGLYNSVSMFSVRLMQLEEEAAR
XP_022985853.1 uncharacterized protein LOC111483780 [Cucurbita maxima]7.6e-4576.98Show/hide
Query:  MQQLQARLLKSLSISSSPAASTIQEIASARPKGQSVICIPRLRPAKRYRLSQFVYVSSPHLASGLSKVVLKKGKTQLFKDGSPMVYSGAVDRIIGRPPPK
        MQQLQARLLKSLSISSSPAASTIQEIAS+RPK                               GLSKVVLKKGKTQLFKDGSPMVYSGAVDRIIGRPPPK
Subjt:  MQQLQARLLKSLSISSSPAASTIQEIASARPKGQSVICIPRLRPAKRYRLSQFVYVSSPHLASGLSKVVLKKGKTQLFKDGSPMVYSGAVDRIIGRPPPK

Query:  TGDVVLVADGAEKPIGWGLYNSVSMFSVRLMQLEEEAAR
        TGDVVLVADGAEKPIGWGLYNSVSMFSVRLMQLEEEAAR
Subjt:  TGDVVLVADGAEKPIGWGLYNSVSMFSVRLMQLEEEAAR
XP_023512212.1 uncharacterized protein LOC111777007 [Cucurbita pepo subsp. pepo]4.4e-4576.98Show/hide
Query:  MQQLQARLLKSLSISSSPAASTIQEIASARPKGQSVICIPRLRPAKRYRLSQFVYVSSPHLASGLSKVVLKKGKTQLFKDGSPMVYSGAVDRIIGRPPPK
        MQQLQARLLKSLS+SSSPAASTIQEIASARPK                               GLSKVVLKKGKTQLFKDGSPMVYSGAVDRIIGRPPPK
Subjt:  MQQLQARLLKSLSISSSPAASTIQEIASARPKGQSVICIPRLRPAKRYRLSQFVYVSSPHLASGLSKVVLKKGKTQLFKDGSPMVYSGAVDRIIGRPPPK

Query:  TGDVVLVADGAEKPIGWGLYNSVSMFSVRLMQLEEEAAR
        TGDVVLVADGAEKPIGWGLYNSVSMFSVRLMQLEEEAAR
Subjt:  TGDVVLVADGAEKPIGWGLYNSVSMFSVRLMQLEEEAAR
TrEMBL top hitse value%identityAlignment
A0A1S3C2G7 ribosomal RNA large subunit methyltransferase I isoform X32.7e-4071.01Show/hide
Query:  MQQLQARLLKSLSISSSPAASTIQEIASARPKGQSVICIPRLRPAKRYRLSQFVYVSSPHLASGLSKVVLKKGKTQLFKDGSPMVYSGAVDRIIGRPPPK
        M  LQ+RL+KSLSISSSPAASTIQEIA+A PK                               GL+KVVLKKGK QLFKDGSPMVYSGAVDRIIGRPPPK
Subjt:  MQQLQARLLKSLSISSSPAASTIQEIASARPKGQSVICIPRLRPAKRYRLSQFVYVSSPHLASGLSKVVLKKGKTQLFKDGSPMVYSGAVDRIIGRPPPK

Query:  TGDVVLVADGAEKPIGWGLYNSVSMFSVRLMQLEEEAA
        TGDVVLVADG EKPIGWGLYNSVSMFSVRLMQLEEEAA
Subjt:  TGDVVLVADGAEKPIGWGLYNSVSMFSVRLMQLEEEAA
A0A1S3C2Z6 ribosomal RNA large subunit methyltransferase I isoform X42.7e-4071.01Show/hide
Query:  MQQLQARLLKSLSISSSPAASTIQEIASARPKGQSVICIPRLRPAKRYRLSQFVYVSSPHLASGLSKVVLKKGKTQLFKDGSPMVYSGAVDRIIGRPPPK
        M  LQ+RL+KSLSISSSPAASTIQEIA+A PK                               GL+KVVLKKGK QLFKDGSPMVYSGAVDRIIGRPPPK
Subjt:  MQQLQARLLKSLSISSSPAASTIQEIASARPKGQSVICIPRLRPAKRYRLSQFVYVSSPHLASGLSKVVLKKGKTQLFKDGSPMVYSGAVDRIIGRPPPK

Query:  TGDVVLVADGAEKPIGWGLYNSVSMFSVRLMQLEEEAA
        TGDVVLVADG EKPIGWGLYNSVSMFSVRLMQLEEEAA
Subjt:  TGDVVLVADGAEKPIGWGLYNSVSMFSVRLMQLEEEAA
A0A1S3C3K0 ribosomal RNA large subunit methyltransferase I isoform X12.7e-4071.01Show/hide
Query:  MQQLQARLLKSLSISSSPAASTIQEIASARPKGQSVICIPRLRPAKRYRLSQFVYVSSPHLASGLSKVVLKKGKTQLFKDGSPMVYSGAVDRIIGRPPPK
        M  LQ+RL+KSLSISSSPAASTIQEIA+A PK                               GL+KVVLKKGK QLFKDGSPMVYSGAVDRIIGRPPPK
Subjt:  MQQLQARLLKSLSISSSPAASTIQEIASARPKGQSVICIPRLRPAKRYRLSQFVYVSSPHLASGLSKVVLKKGKTQLFKDGSPMVYSGAVDRIIGRPPPK

Query:  TGDVVLVADGAEKPIGWGLYNSVSMFSVRLMQLEEEAA
        TGDVVLVADG EKPIGWGLYNSVSMFSVRLMQLEEEAA
Subjt:  TGDVVLVADGAEKPIGWGLYNSVSMFSVRLMQLEEEAA
A0A6J1FRU8 uncharacterized protein LOC1114482412.2e-4576.98Show/hide
Query:  MQQLQARLLKSLSISSSPAASTIQEIASARPKGQSVICIPRLRPAKRYRLSQFVYVSSPHLASGLSKVVLKKGKTQLFKDGSPMVYSGAVDRIIGRPPPK
        MQQLQARLLKSLSISSSPAASTIQEIASARPK                               GLSKVVLKKGKTQLFKDGSPMVYSGA+DRIIGRPPPK
Subjt:  MQQLQARLLKSLSISSSPAASTIQEIASARPKGQSVICIPRLRPAKRYRLSQFVYVSSPHLASGLSKVVLKKGKTQLFKDGSPMVYSGAVDRIIGRPPPK

Query:  TGDVVLVADGAEKPIGWGLYNSVSMFSVRLMQLEEEAAR
        TGDVVLVADGAEKPIGWGLYNSVSMFSVRLMQLEEEAAR
Subjt:  TGDVVLVADGAEKPIGWGLYNSVSMFSVRLMQLEEEAAR
A0A6J1JEU3 uncharacterized protein LOC1114837803.7e-4576.98Show/hide
Query:  MQQLQARLLKSLSISSSPAASTIQEIASARPKGQSVICIPRLRPAKRYRLSQFVYVSSPHLASGLSKVVLKKGKTQLFKDGSPMVYSGAVDRIIGRPPPK
        MQQLQARLLKSLSISSSPAASTIQEIAS+RPK                               GLSKVVLKKGKTQLFKDGSPMVYSGAVDRIIGRPPPK
Subjt:  MQQLQARLLKSLSISSSPAASTIQEIASARPKGQSVICIPRLRPAKRYRLSQFVYVSSPHLASGLSKVVLKKGKTQLFKDGSPMVYSGAVDRIIGRPPPK

Query:  TGDVVLVADGAEKPIGWGLYNSVSMFSVRLMQLEEEAAR
        TGDVVLVADGAEKPIGWGLYNSVSMFSVRLMQLEEEAAR
Subjt:  TGDVVLVADGAEKPIGWGLYNSVSMFSVRLMQLEEEAAR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54310.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein1.3e-3473.68Show/hide
Query:  RLSQFVYVSSPHLAS----GLSKVVLKKGKTQLFKDGSPMVYSGAVDRIIGRPPPKTGDVVLVADGAEKPIGWGLYNSVSMFSVRLMQLEEEAAR
        RL   ++ SS  +AS    G++KVVLKKGKTQLFKDGSPMVYSGAVDRIIG+PPP+TGDVV+VADG E PIGWGLYNSVSMF VRLMQL+ E+ R
Subjt:  RLSQFVYVSSPHLAS----GLSKVVLKKGKTQLFKDGSPMVYSGAVDRIIGRPPPKTGDVVLVADGAEKPIGWGLYNSVSMFSVRLMQLEEEAAR
AT1G54310.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein1.3e-3473.68Show/hide
Query:  RLSQFVYVSSPHLAS----GLSKVVLKKGKTQLFKDGSPMVYSGAVDRIIGRPPPKTGDVVLVADGAEKPIGWGLYNSVSMFSVRLMQLEEEAAR
        RL   ++ SS  +AS    G++KVVLKKGKTQLFKDGSPMVYSGAVDRIIG+PPP+TGDVV+VADG E PIGWGLYNSVSMF VRLMQL+ E+ R
Subjt:  RLSQFVYVSSPHLAS----GLSKVVLKKGKTQLFKDGSPMVYSGAVDRIIGRPPPKTGDVVLVADGAEKPIGWGLYNSVSMFSVRLMQLEEEAAR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCAGCTTCAAGCCCGCCTGCTAAAGTCTCTTTCCATTTCTTCTTCACCGGCCGCCTCAACAATCCAAGAAATCGCTTCCGCTCGCCCCAAAGGTCAGTCTGTGAT
TTGTATCCCTCGCTTGCGACCTGCAAAACGATATCGATTATCCCAATTCGTTTATGTTTCTTCCCCACATTTAGCTTCTGGTTTATCCAAGGTTGTGCTGAAAAAGGGGA
AGACACAGCTCTTTAAAGATGGGAGTCCGATGGTGTACAGTGGAGCTGTTGATAGAATAATTGGACGGCCACCGCCAAAAACTGGAGATGTTGTCCTGGTAGCCGATGGG
GCTGAGAAACCTATAGGATGGGGTTTGTATAACTCAGTTTCCATGTTCTCTGTCAGATTGATGCAGCTGGAAGAGGAGGCAGCTAGGTACTTAATTGGGCAATGCTTGAA
CTCTGTGACTAACATCACCTTCTATATGTGGTGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGCAGCTTCAAGCCCGCCTGCTAAAGTCTCTTTCCATTTCTTCTTCACCGGCCGCCTCAACAATCCAAGAAATCGCTTCCGCTCGCCCCAAAGGTCAGTCTGTGAT
TTGTATCCCTCGCTTGCGACCTGCAAAACGATATCGATTATCCCAATTCGTTTATGTTTCTTCCCCACATTTAGCTTCTGGTTTATCCAAGGTTGTGCTGAAAAAGGGGA
AGACACAGCTCTTTAAAGATGGGAGTCCGATGGTGTACAGTGGAGCTGTTGATAGAATAATTGGACGGCCACCGCCAAAAACTGGAGATGTTGTCCTGGTAGCCGATGGG
GCTGAGAAACCTATAGGATGGGGTTTGTATAACTCAGTTTCCATGTTCTCTGTCAGATTGATGCAGCTGGAAGAGGAGGCAGCTAGGTACTTAATTGGGCAATGCTTGAA
CTCTGTGACTAACATCACCTTCTATATGTGGTGCTAA
Protein sequenceShow/hide protein sequence
MQQLQARLLKSLSISSSPAASTIQEIASARPKGQSVICIPRLRPAKRYRLSQFVYVSSPHLASGLSKVVLKKGKTQLFKDGSPMVYSGAVDRIIGRPPPKTGDVVLVADG
AEKPIGWGLYNSVSMFSVRLMQLEEEAARYLIGQCLNSVTNITFYMWC