CuGenDBv2

Gene ID	Carg03426
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	S-adenosylmethionine-dependent methyltransferase, putative
Genome location	Carg_Chr20:1408854..1410864
RNA-Seq Expression	Carg03426
Synteny	Carg03426
Gene Ontology terms	NA
InterPro domains	IPR010719 - Putative rRNA methylase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6570591.1 hypothetical protein SDJN03_29506, partial [Cucurbita argyrosperma subsp. sororia]

3.4e-116

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Query:  MLSLKFGYKWVAVAAASEPVVGRQRHLRNLCCLSNRIYSNGISSEYQSDFSSP-SSSSSSSKDFSSLEGLEDVMVGYLFGKKRATEVAHSYAFVLHWPLF
        MLSLKFGYKWVAVAAASEPVVGRQRHLRNLCCLSNRIYSNGISSEYQSDFSSP SSSSSSSKDFSSLEGLEDVMVGYLFGKKRATEVAHS          
Subjt:  MLSLKFGYKWVAVAAASEPVVGRQRHLRNLCCLSNRIYSNGISSEYQSDFSSP-SSSSSSSKDFSSLEGLEDVMVGYLFGKKRATEVAHSYAFVLHWPLF

Query:  FNAMVSIELVWKRVIRTGDTVVDATCGNGYDTLAMLKMVADEAGSARVYAMDVQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSPVRLV
                 VWKRVIRTGDTVVDATCGNGYDTLAMLKMVADEAGSARVYAMDVQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSPVRLV
Subjt:  FNAMVSIELVWKRVIRTGDTVVDATCGNGYDTLAMLKMVADEAGSARVYAMDVQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSPVRLV

Query:  AFNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGL
        AFNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGL
Subjt:  AFNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGL

KAG7010442.1 ytqB, partial [Cucurbita argyrosperma subsp. argyrosperma]

8.9e-133

100

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Query:  MLSLKFGYKWVAVAAASEPVVGRQRHLRNLCCLSNRIYSNGISSEYQSDFSSPSSSSSSSKDFSSLEGLEDVMVGYLFGKKRATEVAHSYAFVLHWPLFF
        MLSLKFGYKWVAVAAASEPVVGRQRHLRNLCCLSNRIYSNGISSEYQSDFSSPSSSSSSSKDFSSLEGLEDVMVGYLFGKKRATEVAHSYAFVLHWPLFF
Subjt:  MLSLKFGYKWVAVAAASEPVVGRQRHLRNLCCLSNRIYSNGISSEYQSDFSSPSSSSSSSKDFSSLEGLEDVMVGYLFGKKRATEVAHSYAFVLHWPLFF

Query:  NAMVSIELVWKRVIRTGDTVVDATCGNGYDTLAMLKMVADEAGSARVYAMDVQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSPVRLVA
        NAMVSIELVWKRVIRTGDTVVDATCGNGYDTLAMLKMVADEAGSARVYAMDVQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSPVRLVA
Subjt:  NAMVSIELVWKRVIRTGDTVVDATCGNGYDTLAMLKMVADEAGSARVYAMDVQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSPVRLVA

Query:  FNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGL
        FNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGL
Subjt:  FNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGL

XP_022943494.1 uncharacterized protein LOC111448248 [Cucurbita moschata]

6.4e-115

90.36

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Query:  MLSLKFGYKWVAVAAASEPVVGRQRHLRNLCCLSNRIYSNGISSEYQSDFSSPSSSSSSSKDFSSLEGLEDVMVGYLFGKKRATEVAHSYAFVLHWPLFF
        MLSLKFGYKWVAVAAASEPVVGRQRHLRN CC SNRI+SNGISSEYQSDFSSPSSSSSSSKDFSSLEGLEDVMVGYLFGKKRATEVAHS           
Subjt:  MLSLKFGYKWVAVAAASEPVVGRQRHLRNLCCLSNRIYSNGISSEYQSDFSSPSSSSSSSKDFSSLEGLEDVMVGYLFGKKRATEVAHSYAFVLHWPLFF

Query:  NAMVSIELVWKRVIRTGDTVVDATCGNGYDTLAMLKMVADEAGSARVYAMDVQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSPVRLVA
                VWKRVIRTGDTVVDATCGNGYDTLAMLKMVADEAGSARVYAMDVQKEALES SALLDESL EKERKLVKLSSICHSRMEDVIPEGSPVRLVA
Subjt:  NAMVSIELVWKRVIRTGDTVVDATCGNGYDTLAMLKMVADEAGSARVYAMDVQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSPVRLVA

Query:  FNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGL
        FNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGL
Subjt:  FNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGL

XP_022986072.1 uncharacterized protein LOC111483929 [Cucurbita maxima]

1.7e-112

89.56

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Query:  MLSLKFGYKWVAVAAASEPVVGRQRHLRNLCCLSNRIYSNGISSEYQSDFSSPSSSSSSSKDFSSLEGLEDVMVGYLFGKKRATEVAHSYAFVLHWPLFF
        MLSLKFGYKWVAVAAASEPVVGRQRHLRNLCC SNRI+SNGISSEYQ+ FSSP   SSSSKDFSSLEGLEDVMVGYLFGKKRATEVAHS           
Subjt:  MLSLKFGYKWVAVAAASEPVVGRQRHLRNLCCLSNRIYSNGISSEYQSDFSSPSSSSSSSKDFSSLEGLEDVMVGYLFGKKRATEVAHSYAFVLHWPLFF

Query:  NAMVSIELVWKRVIRTGDTVVDATCGNGYDTLAMLKMVADEAGSARVYAMDVQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSPVRLVA
                VWKRVIRTGDTVVDATCGNGYDTLAMLKMVADEAGSARVYAMDVQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSPVRLVA
Subjt:  NAMVSIELVWKRVIRTGDTVVDATCGNGYDTLAMLKMVADEAGSARVYAMDVQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSPVRLVA

Query:  FNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGL
        FNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGL
Subjt:  FNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGL

XP_023511899.1 uncharacterized protein LOC111776775 [Cucurbita pepo subsp. pepo]

1.3e-112

89.16

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Query:  MLSLKFGYKWVAVAAASEPVVGRQRHLRNLCCLSNRIYSNGISSEYQSDFSSPSSSSSSSKDFSSLEGLEDVMVGYLFGKKRATEVAHSYAFVLHWPLFF
        MLSLKFGYKWVAVAAASEPVVGRQRHLRNLCC SNRI+SNGISSEYQSDFSSP   SSSSKDFSSLEGLEDVMVGYLFGKKRATEVAHS           
Subjt:  MLSLKFGYKWVAVAAASEPVVGRQRHLRNLCCLSNRIYSNGISSEYQSDFSSPSSSSSSSKDFSSLEGLEDVMVGYLFGKKRATEVAHSYAFVLHWPLFF

Query:  NAMVSIELVWKRVIRTGDTVVDATCGNGYDTLAMLKMVADEAGSARVYAMDVQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSPVRLVA
                VWKRVIRTGDTVVDATCGNGYDTLAMLKMVADEAGSARVYAMDVQKEALESTSALLDESL +KERKLVKLSSICHSRMEDVIPEGSPVRLVA
Subjt:  NAMVSIELVWKRVIRTGDTVVDATCGNGYDTLAMLKMVADEAGSARVYAMDVQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSPVRLVA

Query:  FNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGL
        FNLGYLPGGNKAITTKSETTLQALEAAYR+LKPGGLISLVVYVGHPGGL
Subjt:  FNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KEF8 Uncharacterized protein

6.1e-95

77.91

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Query:  MLSLKFGYKWVAVAAASEPVVGRQRHLRNLCCLSNRIYSNGISSEYQSDFSSPSSSSSSSKDFSSLEGLEDVMVGYLFGKKRATEVAHSYAFVLHWPLFF
        MLSLKFG KWVAV A SE VVGRQRHLR+LCC SNRI SNG+SS+YQ DF+SP SS  S     SLEGLEDVMVGY FGKKRATEVAHS           
Subjt:  MLSLKFGYKWVAVAAASEPVVGRQRHLRNLCCLSNRIYSNGISSEYQSDFSSPSSSSSSSKDFSSLEGLEDVMVGYLFGKKRATEVAHSYAFVLHWPLFF

Query:  NAMVSIELVWKRVIRTGDTVVDATCGNGYDTLAMLKMVADEAGSARVYAMDVQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSPVRLVA
                VWK +++ GDTVVDATCGNGYDTLAM+KMVADE+GSARVYAMDVQ EALESTSALLDESLSEKE+KLVKLSSICHSRMEDVI E SPV LVA
Subjt:  NAMVSIELVWKRVIRTGDTVVDATCGNGYDTLAMLKMVADEAGSARVYAMDVQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSPVRLVA

Query:  FNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGL
        FNLGYLPGGNKAITTKSETT QAL+AA+RILKPGGLISLVVYVGHPGG+
Subjt:  FNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGL

A0A6J1D648 uncharacterized protein LOC111017978 isoform X2

1.9e-88

75.9

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Query:  MLSLKFGYKWVAVAAASEPVVGRQRHLRNLCCLSNRIYSNGISSEYQSDFSSPSSSSSSSKDFSSLEGLEDVMVGYLFGKKRATEVAHSYAFVLHWPLFF
        MLSLKFG K VAV    +PVV RQRH RNL   SN I SNG+S EYQ++FSSP    SSSK+FSSLEGLEDVMVGY+ GKKRATEVAHS           
Subjt:  MLSLKFGYKWVAVAAASEPVVGRQRHLRNLCCLSNRIYSNGISSEYQSDFSSPSSSSSSSKDFSSLEGLEDVMVGYLFGKKRATEVAHSYAFVLHWPLFF

Query:  NAMVSIELVWKRVIRTGDTVVDATCGNGYDTLAMLKMVADEAGSARVYAMDVQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSPVRLVA
                VWK +IR GDTVVDAT GNGYDTLAM+KMVADE+GS  VYAMDVQKEAL  TSALL+ESL E+E KLVKLSSICHSRMEDVIPEGSPVRLVA
Subjt:  NAMVSIELVWKRVIRTGDTVVDATCGNGYDTLAMLKMVADEAGSARVYAMDVQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSPVRLVA

Query:  FNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGL
        FNLGYLPGGNKAITTKSETTLQALEAA RILKPGGLISLVVYVGHPGG+
Subjt:  FNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGL

A0A6J1D7G1 uncharacterized protein LOC111017978 isoform X1

4.5e-90

75.9

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Query:  MLSLKFGYKWVAVAAASEPVVGRQRHLRNLCCLSNRIYSNGISSEYQSDFSSPSSSSSSSKDFSSLEGLEDVMVGYLFGKKRATEVAHSYAFVLHWPLFF
        MLSLKFG K VAV    +PVV RQRH RNL   SN I SNG+S EYQ++FSSP    SSSK+FSSLEGLEDVMVGY+ GKKRATEVAHS           
Subjt:  MLSLKFGYKWVAVAAASEPVVGRQRHLRNLCCLSNRIYSNGISSEYQSDFSSPSSSSSSSKDFSSLEGLEDVMVGYLFGKKRATEVAHSYAFVLHWPLFF

Query:  NAMVSIELVWKRVIRTGDTVVDATCGNGYDTLAMLKMVADEAGSARVYAMDVQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSPVRLVA
                VWK +IR GDTVVDAT GNGYDTLAM+KMVADE+GS  VYAMDVQKEAL  TSALL+ESL E+E+KLVKLSSICHSRMEDVIPEGSPVRLVA
Subjt:  NAMVSIELVWKRVIRTGDTVVDATCGNGYDTLAMLKMVADEAGSARVYAMDVQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSPVRLVA

Query:  FNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGL
        FNLGYLPGGNKAITTKSETTLQALEAA RILKPGGLISLVVYVGHPGG+
Subjt:  FNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGL

A0A6J1FUH7 uncharacterized protein LOC111448248

3.1e-115

90.36

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Query:  MLSLKFGYKWVAVAAASEPVVGRQRHLRNLCCLSNRIYSNGISSEYQSDFSSPSSSSSSSKDFSSLEGLEDVMVGYLFGKKRATEVAHSYAFVLHWPLFF
        MLSLKFGYKWVAVAAASEPVVGRQRHLRN CC SNRI+SNGISSEYQSDFSSPSSSSSSSKDFSSLEGLEDVMVGYLFGKKRATEVAHS           
Subjt:  MLSLKFGYKWVAVAAASEPVVGRQRHLRNLCCLSNRIYSNGISSEYQSDFSSPSSSSSSSKDFSSLEGLEDVMVGYLFGKKRATEVAHSYAFVLHWPLFF

Query:  NAMVSIELVWKRVIRTGDTVVDATCGNGYDTLAMLKMVADEAGSARVYAMDVQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSPVRLVA
                VWKRVIRTGDTVVDATCGNGYDTLAMLKMVADEAGSARVYAMDVQKEALES SALLDESL EKERKLVKLSSICHSRMEDVIPEGSPVRLVA
Subjt:  NAMVSIELVWKRVIRTGDTVVDATCGNGYDTLAMLKMVADEAGSARVYAMDVQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSPVRLVA

Query:  FNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGL
        FNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGL
Subjt:  FNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGL

A0A6J1J6K5 uncharacterized protein LOC111483929

8.5e-113

89.56

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Query:  MLSLKFGYKWVAVAAASEPVVGRQRHLRNLCCLSNRIYSNGISSEYQSDFSSPSSSSSSSKDFSSLEGLEDVMVGYLFGKKRATEVAHSYAFVLHWPLFF
        MLSLKFGYKWVAVAAASEPVVGRQRHLRNLCC SNRI+SNGISSEYQ+ FSSP   SSSSKDFSSLEGLEDVMVGYLFGKKRATEVAHS           
Subjt:  MLSLKFGYKWVAVAAASEPVVGRQRHLRNLCCLSNRIYSNGISSEYQSDFSSPSSSSSSSKDFSSLEGLEDVMVGYLFGKKRATEVAHSYAFVLHWPLFF

Query:  NAMVSIELVWKRVIRTGDTVVDATCGNGYDTLAMLKMVADEAGSARVYAMDVQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSPVRLVA
                VWKRVIRTGDTVVDATCGNGYDTLAMLKMVADEAGSARVYAMDVQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSPVRLVA
Subjt:  NAMVSIELVWKRVIRTGDTVVDATCGNGYDTLAMLKMVADEAGSARVYAMDVQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSPVRLVA

Query:  FNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGL
        FNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGL
Subjt:  FNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGGL

SwissProt top hits

e value

%identity

Alignment

O34614 Putative rRNA methylase YtqB

1.2e-18

41.04

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Query:  GDTVVDATCGNGYDTLAMLKMVADEAGSARVYAMDVQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSPVRLVA--FNLGYLPGGNKAIT
        GD VVDAT GNG+DT  + ++V +   +  VYA D+Q+ A+ +T     E L +  +    L    H ++ + +P  +  ++ A  FNLGYLPGG+K+IT
Subjt:  GDTVVDATCGNGYDTLAMLKMVADEAGSARVYAMDVQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSPVRLVA--FNLGYLPGGNKAIT

Query:  TKSETTLQALEAAYRILKPGGLISLVVYVGHPGG
        T   +T++A+E    I+K  GLI LVVY GHP G
Subjt:  TKSETTLQALEAAYRILKPGGLISLVVYVGHPGG

Arabidopsis top hits

e value

%identity

Alignment

AT1G16445.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

1.6e-58

60.41

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Query:  SSSSSSSKDFSSLEGLEDVMVGYLFGKKRATEVAHSYAFVLHWPLFFNAMVSIELVWKRVIRTGDTVVDATCGNGYDTLAMLKMVA-DEAG-SARVYAMD
        SS+ S S++F  + GLEDV VGYLFG+K+ATEVAH                   +VW++VI+ GDTV+DATCGNG DTLAMLKMV  D  G    VYAMD
Subjt:  SSSSSSSKDFSSLEGLEDVMVGYLFGKKRATEVAHSYAFVLHWPLFFNAMVSIELVWKRVIRTGDTVVDATCGNGYDTLAMLKMVA-DEAG-SARVYAMD

Query:  VQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSPVRLVAFNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGG
        +QK+A+ESTS+LLD+++  KE++ VKL ++CHS+M +++PE + VR+VAFNLGYLPGGNK+I T S+TTL AL+AA RILKPGGLISLVVY+GHPGG
Subjt:  VQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSPVRLVAFNLGYLPGGNKAITTKSETTLQALEAAYRILKPGGLISLVVYVGHPGG

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTTATCTTTGAAATTTGGGTACAAATGGGTAGCGGTTGCTGCTGCCTCCGAACCAGTCGTAGGACGTCAAAGACATTTGAGAAATCTTTGCTGCTTATCTAATCGTAT
TTACTCAAATGGGATATCGTCCGAGTATCAGAGTGATTTCTCTTCACCGTCGTCGTCGTCGTCGTCGTCGAAAGATTTTTCGTCTCTAGAAGGATTGGAGGATGTCATGG
TTGGCTACCTTTTTGGGAAGAAGAGAGCGACAGAAGTTGCTCACTCGTATGCCTTTGTTCTTCACTGGCCTCTGTTTTTCAATGCAATGGTCTCTATTGAGCTTGTATGG
AAACGTGTCATCAGAACAGGGGATACAGTGGTAGATGCTACTTGTGGAAATGGGTATGATACTCTAGCTATGCTCAAAATGGTTGCTGACGAAGCTGGTTCTGCGCGTGT
TTATGCAATGGACGTTCAGAAAGAGGCTTTAGAAAGCACTTCTGCGCTACTGGATGAGTCGCTTAGTGAAAAAGAGAGAAAACTTGTTAAACTCTCCTCCATTTGCCACA
GCAGAATGGAAGATGTCATTCCAGAGGGTTCTCCCGTTAGGCTTGTTGCATTTAACCTTGGCTACCTACCTGGTGGTAACAAAGCAATCACTACAAAGTCAGAAACTACA
TTACAAGCACTTGAAGCTGCCTATAGAATTCTGAAACCTGGAGGGCTCATCAGCCTTGTGGTTTATGTGGGGCATCCTGGTGGACTGTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MLSLKFGYKWVAVAAASEPVVGRQRHLRNLCCLSNRIYSNGISSEYQSDFSSPSSSSSSSKDFSSLEGLEDVMVGYLFGKKRATEVAHSYAFVLHWPLFFNAMVSIELVW
KRVIRTGDTVVDATCGNGYDTLAMLKMVADEAGSARVYAMDVQKEALESTSALLDESLSEKERKLVKLSSICHSRMEDVIPEGSPVRLVAFNLGYLPGGNKAITTKSETT
LQALEAAYRILKPGGLISLVVYVGHPGGL

Carg03426 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome