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Carg03432 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg03432
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionzinc finger protein CONSTANS-LIKE 1-like isoform X1
Genome locationCarg_Chr20:1365713..1366919
RNA-Seq ExpressionCarg03432
SyntenyCarg03432
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570585.1 Zinc finger protein CONSTANS-LIKE 3, partial [Cucurbita argyrosperma subsp. sororia]5.4e-7561.9Show/hide
Query:  MASFPHFYSDLLYPNNFSDLQSLLMAAGDPRIGGIRNNDDNNNNNINLPRGEETFDPTLDQMASFESDTQSPLLTMPYPDLTVPSSPEFNKGMYGIHSVI
        MASFPHFYSDLLYPNNFSDLQSLLM AGDP IGGIRNNDDNNNNNINLPRGEETFDPTLDQM SFESDTQSPLLTMPYPDLTVPSSPEFNKGMYGIHSVI
Subjt:  MASFPHFYSDLLYPNNFSDLQSLLMAAGDPRIGGIRNNDDNNNNNINLPRGEETFDPTLDQMASFESDTQSPLLTMPYPDLTVPSSPEFNKGMYGIHSVI

Query:  GNQPRVPGSCNYDDELLGFVPDLKPFYRNIW---------------------------------------------------------------------
        GNQPRVPGSCNYDDELLGFVPDLKPFYRNIW                                                                     
Subjt:  GNQPRVPGSCNYDDELLGFVPDLKPFYRNIW---------------------------------------------------------------------

Query:  ------------------------NKEEEEESWLQELAASLMYLPYVTNYGV
                                NKEEEEESWLQELAASLMYLPYVTNYGV
Subjt:  ------------------------NKEEEEESWLQELAASLMYLPYVTNYGV

KAG7010436.1 hypothetical protein SDJN02_27229, partial [Cucurbita argyrosperma subsp. argyrosperma]8.6e-89100Show/hide
Query:  MASFPHFYSDLLYPNNFSDLQSLLMAAGDPRIGGIRNNDDNNNNNINLPRGEETFDPTLDQMASFESDTQSPLLTMPYPDLTVPSSPEFNKGMYGIHSVI
        MASFPHFYSDLLYPNNFSDLQSLLMAAGDPRIGGIRNNDDNNNNNINLPRGEETFDPTLDQMASFESDTQSPLLTMPYPDLTVPSSPEFNKGMYGIHSVI
Subjt:  MASFPHFYSDLLYPNNFSDLQSLLMAAGDPRIGGIRNNDDNNNNNINLPRGEETFDPTLDQMASFESDTQSPLLTMPYPDLTVPSSPEFNKGMYGIHSVI

Query:  GNQPRVPGSCNYDDELLGFVPDLKPFYRNIWNKEEEEESWLQELAASLMYLPYVTNYGV
        GNQPRVPGSCNYDDELLGFVPDLKPFYRNIWNKEEEEESWLQELAASLMYLPYVTNYGV
Subjt:  GNQPRVPGSCNYDDELLGFVPDLKPFYRNIWNKEEEEESWLQELAASLMYLPYVTNYGV

XP_022943623.1 zinc finger protein CONSTANS-LIKE 1-like isoform X1 [Cucurbita moschata]6.9e-7060.32Show/hide
Query:  MASFPHFYSDLLYPNNFSDLQSLLMAAGDPRIGGIRNNDDNNNNNINLPRGEETFDPTLDQMASFESDTQSPLLTMPYPDLTVPSSPEFNKGMYGIHSVI
        MASFPHFYSD LYPNNFSDLQSLLMAAGDP IGGIR NDD+NNNNINLP GEETF  TLDQMASFESDTQSPLLTMPYPDLTVPSSPEFNKGMYGIHSVI
Subjt:  MASFPHFYSDLLYPNNFSDLQSLLMAAGDPRIGGIRNNDDNNNNNINLPRGEETFDPTLDQMASFESDTQSPLLTMPYPDLTVPSSPEFNKGMYGIHSVI

Query:  GNQPRVPGSCNYDDELLGFVPDLKPFYRNIW---------------------------------------------------------------------
        GNQPRVPGSCNYDDELLGFVPDLKPFYRNIW                                                                     
Subjt:  GNQPRVPGSCNYDDELLGFVPDLKPFYRNIW---------------------------------------------------------------------

Query:  ------------------------NKEEEEESWLQELAASLMYLPYVTNYGV
                                NKEEEEESWLQELAASLMYLPYVTNYGV
Subjt:  ------------------------NKEEEEESWLQELAASLMYLPYVTNYGV

XP_022986020.1 uncharacterized protein LOC111483882 [Cucurbita maxima]2.5e-6457.14Show/hide
Query:  MASFPHFYSDLLYPNNFSDLQSLLMAAGDPRIGGIRNNDDNNNNNINLPRGEETFDPTLDQMASFESDTQSPLLTMPYPDLTVPSSPEFNKGMYGIHSVI
        MASFPHFYSDLLYPNNFSDLQSLLMAAGDPR+GGIRN  DNNNNNI+LPRGEETF P+ DQMASFESDTQSPLLTMPYPDLTVPSSPEFNKGMYGIHSV 
Subjt:  MASFPHFYSDLLYPNNFSDLQSLLMAAGDPRIGGIRNNDDNNNNNINLPRGEETFDPTLDQMASFESDTQSPLLTMPYPDLTVPSSPEFNKGMYGIHSVI

Query:  GNQPRVPGSCNYDDELLGFVPDLKPFYRNIW---------------------------------------------------------------------
         +QP  P SCNYDDELL FVP+LKPFYRNIW                                                                     
Subjt:  GNQPRVPGSCNYDDELLGFVPDLKPFYRNIW---------------------------------------------------------------------

Query:  ------------------------NKEEEEESWLQELAASLMYLPYVTNYGV
                                NKEEEEESWLQELAASLMYLPYVTNYGV
Subjt:  ------------------------NKEEEEESWLQELAASLMYLPYVTNYGV

XP_023511907.1 zinc finger protein CONSTANS-LIKE 1-like [Cucurbita pepo subsp. pepo]3.1e-7059.29Show/hide
Query:  MASFPHFYSDLLYPNNFSDLQSLLMAAGDPRIGGIR-NNDDNNNNNINLPRGEETFDPTLDQMASFESDTQSPLLTMPYPDLTVPSSPEFNKGMYGIHSV
        MASFPHFYSDLLYPNNFSDLQ+LLMAAGDP IGGIR NNDDNNNNNI+LPRGEETF P  D+MASFESDTQSPLLTMPYPDLT+PSSPEFNKGMYGIHSV
Subjt:  MASFPHFYSDLLYPNNFSDLQSLLMAAGDPRIGGIR-NNDDNNNNNINLPRGEETFDPTLDQMASFESDTQSPLLTMPYPDLTVPSSPEFNKGMYGIHSV

Query:  IGNQPRVPGSCNYDDELLGFVPDLKPFYRNIW--------------------------------------------------------------------
        IGNQP+VPGSCNYDDELLGFVPDLKPFYRNIW                                                                    
Subjt:  IGNQPRVPGSCNYDDELLGFVPDLKPFYRNIW--------------------------------------------------------------------

Query:  -------------------------NKEEEEESWLQELAASLMYLPYVTNYGV
                                 NKEEEEESWLQELAASLMYLPYVTNYGV
Subjt:  -------------------------NKEEEEESWLQELAASLMYLPYVTNYGV

TrEMBL top hitse value%identityAlignment
A0A0A0KGC0 CCT domain-containing protein1.2e-3539.85Show/hide
Query:  MASFPH-FYSDLLYPNNFSDLQSLLMAAGDPRIGGIRNNDDNNNNNINLPRGEETFDPTLDQMAS---FESDTQ-SPLLTMPYPDL-------TVPSSPE
        MASFPH FY DL YPNNFSDLQ+LLMAAGD  + GIRNN +N+N ++ + R EETF  + DQ  S     SDT  SP LTM +PDL       TVPS PE
Subjt:  MASFPH-FYSDLLYPNNFSDLQSLLMAAGDPRIGGIRNNDDNNNNNINLPRGEETFDPTLDQMAS---FESDTQ-SPLLTMPYPDL-------TVPSSPE

Query:  FNKGMYGIHSVIGNQPRVPGSCNYDDELLGFVPDLKPFYRNIWNKE------------------------------------------------------
        FN   Y IHS+I  QP+VPG+CNY D+L+GFVP+LKP YR+ W  +                                                      
Subjt:  FNKGMYGIHSVIGNQPRVPGSCNYDDELLGFVPDLKPFYRNIWNKE------------------------------------------------------

Query:  ----------------------------------------------EEEESWLQELAASLMYLPYVTNYGV
                                                      EEEESWLQELA SLMYLPYV NYGV
Subjt:  ----------------------------------------------EEEESWLQELAASLMYLPYVTNYGV

A0A1S4E134 uncharacterized protein LOC1034962997.5e-3862.5Show/hide
Query:  MASFPH-FYSDLLYPNNFSDLQSLLMAAGDPRIGGIRNNDDNNNNNINL-PRGEETFDPTLDQMASFE---SDT-QSPLLTMPYPDL-------TVPSSP
        MASFPH FYSD LYPNNFSDLQ+LLMAAGD  + GIRNN++NNNNNI+L    EETF P  DQ  S E   SDT  SP LTM +PDL       TVPS P
Subjt:  MASFPH-FYSDLLYPNNFSDLQSLLMAAGDPRIGGIRNNDDNNNNNINL-PRGEETFDPTLDQMASFE---SDT-QSPLLTMPYPDL-------TVPSSP

Query:  EFNKGMYGIHSVIGNQPRVPGSCNYDDELLGFVPDLKPFYRNIWNKEEEEES
        EFN   Y IHS+I  QP+VPG+CNY DELLGFVP+LKP YR+ W  +   E+
Subjt:  EFNKGMYGIHSVIGNQPRVPGSCNYDDELLGFVPDLKPFYRNIWNKEEEEES

A0A6J1FUW6 zinc finger protein CONSTANS-LIKE 1-like isoform X23.6e-5656.58Show/hide
Query:  MAAGDPRIGGIRNNDDNNNNNINLPRGEETFDPTLDQMASFESDTQSPLLTMPYPDLTVPSSPEFNKGMYGIHSVIGNQPRVPGSCNYDDELLGFVPDLK
        MAAGDP IGGIR NDD+NNNNINLP GEETF  TLDQMASFESDTQSPLLTMPYPDLTVPSSPEFNKGMYGIHSVIGNQPRVPGSCNYDDELLGFVPDLK
Subjt:  MAAGDPRIGGIRNNDDNNNNNINLPRGEETFDPTLDQMASFESDTQSPLLTMPYPDLTVPSSPEFNKGMYGIHSVIGNQPRVPGSCNYDDELLGFVPDLK

Query:  PFYRNIW---------------------------------------------------------------------------------------------
        PFYRNIW                                                                                             
Subjt:  PFYRNIW---------------------------------------------------------------------------------------------

Query:  NKEEEEESWLQELAASLMYLPYVTNYGV
        NKEEEEESWLQELAASLMYLPYVTNYGV
Subjt:  NKEEEEESWLQELAASLMYLPYVTNYGV

A0A6J1FX75 zinc finger protein CONSTANS-LIKE 1-like isoform X13.3e-7060.32Show/hide
Query:  MASFPHFYSDLLYPNNFSDLQSLLMAAGDPRIGGIRNNDDNNNNNINLPRGEETFDPTLDQMASFESDTQSPLLTMPYPDLTVPSSPEFNKGMYGIHSVI
        MASFPHFYSD LYPNNFSDLQSLLMAAGDP IGGIR NDD+NNNNINLP GEETF  TLDQMASFESDTQSPLLTMPYPDLTVPSSPEFNKGMYGIHSVI
Subjt:  MASFPHFYSDLLYPNNFSDLQSLLMAAGDPRIGGIRNNDDNNNNNINLPRGEETFDPTLDQMASFESDTQSPLLTMPYPDLTVPSSPEFNKGMYGIHSVI

Query:  GNQPRVPGSCNYDDELLGFVPDLKPFYRNIW---------------------------------------------------------------------
        GNQPRVPGSCNYDDELLGFVPDLKPFYRNIW                                                                     
Subjt:  GNQPRVPGSCNYDDELLGFVPDLKPFYRNIW---------------------------------------------------------------------

Query:  ------------------------NKEEEEESWLQELAASLMYLPYVTNYGV
                                NKEEEEESWLQELAASLMYLPYVTNYGV
Subjt:  ------------------------NKEEEEESWLQELAASLMYLPYVTNYGV

A0A6J1JCW3 uncharacterized protein LOC1114838821.2e-6457.14Show/hide
Query:  MASFPHFYSDLLYPNNFSDLQSLLMAAGDPRIGGIRNNDDNNNNNINLPRGEETFDPTLDQMASFESDTQSPLLTMPYPDLTVPSSPEFNKGMYGIHSVI
        MASFPHFYSDLLYPNNFSDLQSLLMAAGDPR+GGIRN  DNNNNNI+LPRGEETF P+ DQMASFESDTQSPLLTMPYPDLTVPSSPEFNKGMYGIHSV 
Subjt:  MASFPHFYSDLLYPNNFSDLQSLLMAAGDPRIGGIRNNDDNNNNNINLPRGEETFDPTLDQMASFESDTQSPLLTMPYPDLTVPSSPEFNKGMYGIHSVI

Query:  GNQPRVPGSCNYDDELLGFVPDLKPFYRNIW---------------------------------------------------------------------
         +QP  P SCNYDDELL FVP+LKPFYRNIW                                                                     
Subjt:  GNQPRVPGSCNYDDELLGFVPDLKPFYRNIW---------------------------------------------------------------------

Query:  ------------------------NKEEEEESWLQELAASLMYLPYVTNYGV
                                NKEEEEESWLQELAASLMYLPYVTNYGV
Subjt:  ------------------------NKEEEEESWLQELAASLMYLPYVTNYGV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCATTTCCTCACTTCTACTCCGACCTTCTTTATCCCAACAACTTTTCGGACCTTCAGAGCCTATTAATGGCGGCTGGAGACCCCAGGATCGGTGGTATTAGAAA
CAACGACGACAACAACAACAATAATATTAACTTGCCTCGTGGGGAAGAAACCTTTGATCCTACCTTAGATCAGATGGCGTCGTTTGAGTCCGATACCCAATCGCCGCTCC
TAACAATGCCGTATCCCGACCTGACTGTTCCATCATCGCCCGAGTTTAACAAGGGTATGTATGGCATCCATAGCGTAATCGGCAACCAGCCACGTGTGCCCGGCTCGTGC
AATTACGATGACGAACTCTTAGGCTTTGTGCCTGATTTGAAGCCCTTTTATCGCAACATCTGGAATAAGGAAGAAGAAGAAGAGAGCTGGCTGCAAGAATTGGCAGCAAG
TTTAATGTATTTACCTTATGTGACAAATTATGGAGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCATTTCCTCACTTCTACTCCGACCTTCTTTATCCCAACAACTTTTCGGACCTTCAGAGCCTATTAATGGCGGCTGGAGACCCCAGGATCGGTGGTATTAGAAA
CAACGACGACAACAACAACAATAATATTAACTTGCCTCGTGGGGAAGAAACCTTTGATCCTACCTTAGATCAGATGGCGTCGTTTGAGTCCGATACCCAATCGCCGCTCC
TAACAATGCCGTATCCCGACCTGACTGTTCCATCATCGCCCGAGTTTAACAAGGGTATGTATGGCATCCATAGCGTAATCGGCAACCAGCCACGTGTGCCCGGCTCGTGC
AATTACGATGACGAACTCTTAGGCTTTGTGCCTGATTTGAAGCCCTTTTATCGCAACATCTGGAATAAGGAAGAAGAAGAAGAGAGCTGGCTGCAAGAATTGGCAGCAAG
TTTAATGTATTTACCTTATGTGACAAATTATGGAGTGTAA
Protein sequenceShow/hide protein sequence
MASFPHFYSDLLYPNNFSDLQSLLMAAGDPRIGGIRNNDDNNNNNINLPRGEETFDPTLDQMASFESDTQSPLLTMPYPDLTVPSSPEFNKGMYGIHSVIGNQPRVPGSC
NYDDELLGFVPDLKPFYRNIWNKEEEEESWLQELAASLMYLPYVTNYGV