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Carg03437 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg03437
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionConserved oligomeric Golgi complex subunit 5
Genome locationCarg_Chr20:1316594..1320033
RNA-Seq ExpressionCarg03437
SyntenyCarg03437
Gene Ontology termsGO:0006891 - intra-Golgi vesicle-mediated transport (biological process)
GO:0017119 - Golgi transport complex (cellular component)
InterPro domainsIPR019465 - Conserved oligomeric Golgi complex subunit 5


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570578.1 putative BOI-related E3 ubiquitin-protein ligase 3, partial [Cucurbita argyrosperma subsp. sororia]2.7e-6483.97Show/hide
Query:  RHASLVRPLSESGELRMARDMAGLQLAVGQNLFPVEQLGAPYQALHAFRPLIFLETSQLEASPLLHGEDQAWKGIKATLNDYAAKVKTRETRNLAQYTL-
        RHASLVRPLSESGELRMARDMAGLQLAVGQNLFPVEQLGAPYQALHAFRPLIFLETSQLEASPLLHGEDQ WKGIKATLNDYAAKVKTRETRNLAQYTL 
Subjt:  RHASLVRPLSESGELRMARDMAGLQLAVGQNLFPVEQLGAPYQALHAFRPLIFLETSQLEASPLLHGEDQAWKGIKATLNDYAAKVKTRETRNLAQYTL-

Query:  -----------------------SNQRGMHPYEHPPLLKGETLLAHWQRRNLGGEV
                               SNQRGMHPYEHPPLLKGETLLAHWQRRNLGGEV
Subjt:  -----------------------SNQRGMHPYEHPPLLKGETLLAHWQRRNLGGEV

KAG7010431.1 Conserved oligomeric Golgi complex subunit 5, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-89100Show/hide
Query:  MSKYKVGKVLLLLAERTECRHASLVRPLSESGELRMARDMAGLQLAVGQNLFPVEQLGAPYQALHAFRPLIFLETSQLEASPLLHGEDQAWKGIKATLND
        MSKYKVGKVLLLLAERTECRHASLVRPLSESGELRMARDMAGLQLAVGQNLFPVEQLGAPYQALHAFRPLIFLETSQLEASPLLHGEDQAWKGIKATLND
Subjt:  MSKYKVGKVLLLLAERTECRHASLVRPLSESGELRMARDMAGLQLAVGQNLFPVEQLGAPYQALHAFRPLIFLETSQLEASPLLHGEDQAWKGIKATLND

Query:  YAAKVKTRETRNLAQYTLSNQRGMHPYEHPPLLKGETLLAHWQRRNLGGEVRFKLSHCFFIFKVLYN
        YAAKVKTRETRNLAQYTLSNQRGMHPYEHPPLLKGETLLAHWQRRNLGGEVRFKLSHCFFIFKVLYN
Subjt:  YAAKVKTRETRNLAQYTLSNQRGMHPYEHPPLLKGETLLAHWQRRNLGGEVRFKLSHCFFIFKVLYN

KAG7034856.1 Conserved oligomeric Golgi complex subunit 5, partial [Cucurbita argyrosperma subsp. argyrosperma]5.6e-3057.93Show/hide
Query:  RHASLVRPLSESGELRMARDMAGLQLAVGQNLFPVEQLGAPYQALHAFRPLIFLETSQLEASPLLH----------------------------------
        RHASLVRPLSESG+LRMARDMA L+LAVGQNL+PVEQLGAPY+AL AFRPLIFLETSQLEASPLLH                                  
Subjt:  RHASLVRPLSESGELRMARDMAGLQLAVGQNLFPVEQLGAPYQALHAFRPLIFLETSQLEASPLLH----------------------------------

Query:  ------GEDQAWKGIKATLNDYAAKVKTRETRNL-AQYTLSNQRG
              GEDQ WKGIKATL+DYAAKV+ R  +   A Y L  Q G
Subjt:  ------GEDQAWKGIKATLNDYAAKVKTRETRNL-AQYTLSNQRG

XP_022970800.1 conserved oligomeric Golgi complex subunit 5 [Cucurbita maxima]5.6e-3057.93Show/hide
Query:  RHASLVRPLSESGELRMARDMAGLQLAVGQNLFPVEQLGAPYQALHAFRPLIFLETSQLEASPLLH----------------------------------
        RHASLVRPLSESG+LRMARDMA L+LAVGQNL+PVEQLGAPY+AL AFRPLIFLETSQLEASPLLH                                  
Subjt:  RHASLVRPLSESGELRMARDMAGLQLAVGQNLFPVEQLGAPYQALHAFRPLIFLETSQLEASPLLH----------------------------------

Query:  ------GEDQAWKGIKATLNDYAAKVKTRETRNL-AQYTLSNQRG
              GEDQ WKGIKATL+DYAAKV+ R  +   A Y L  Q G
Subjt:  ------GEDQAWKGIKATLNDYAAKVKTRETRNL-AQYTLSNQRG

XP_023533313.1 conserved oligomeric Golgi complex subunit 5 [Cucurbita pepo subsp. pepo]5.6e-3057.93Show/hide
Query:  RHASLVRPLSESGELRMARDMAGLQLAVGQNLFPVEQLGAPYQALHAFRPLIFLETSQLEASPLLH----------------------------------
        RHASLVRPLSESG+LRMARDMA L+LAVGQNL+PVEQLGAPY+AL AFRPLIFLETSQLEASPLLH                                  
Subjt:  RHASLVRPLSESGELRMARDMAGLQLAVGQNLFPVEQLGAPYQALHAFRPLIFLETSQLEASPLLH----------------------------------

Query:  ------GEDQAWKGIKATLNDYAAKVKTRETRNL-AQYTLSNQRG
              GEDQ WKGIKATL+DYAAKV+ R  +   A Y L  Q G
Subjt:  ------GEDQAWKGIKATLNDYAAKVKTRETRNL-AQYTLSNQRG

TrEMBL top hitse value%identityAlignment
A0A067LGT8 Conserved oligomeric Golgi complex subunit 57.9e-3054.9Show/hide
Query:  RHASLVRPLSESGELRMARDMAGLQLAVGQNLFPVEQLGAPYQALHAFRPLIFLETSQLEASPLL-----------------------------------
        RHASLVRPLSESG+LRMARDMA L+LAVGQNL+PVEQLGAPY+AL AFRPLIFLETSQLEASPLL                                   
Subjt:  RHASLVRPLSESGELRMARDMAGLQLAVGQNLFPVEQLGAPYQALHAFRPLIFLETSQLEASPLL-----------------------------------

Query:  -----HGEDQAWKGIKATLNDYAAKVKTRETRNLAQ-YTLSNQRGMHPYEHPP
              GEDQ WKGIKATL+DYAAKV++R  +  +  Y L  Q G    E+ P
Subjt:  -----HGEDQAWKGIKATLNDYAAKVKTRETRNLAQ-YTLSNQRGMHPYEHPP

A0A1S3C499 Conserved oligomeric Golgi complex subunit 56.0e-3054.25Show/hide
Query:  RHASLVRPLSESGELRMARDMAGLQLAVGQNLFPVEQLGAPYQALHAFRPLIFLETSQLEASPLLH----------------------------------
        RHASLVRPLSESG+LRMARDMA L+LAVGQNLFPVEQLGAPY+AL AFRPLIFLETSQLEASPLLH                                  
Subjt:  RHASLVRPLSESGELRMARDMAGLQLAVGQNLFPVEQLGAPYQALHAFRPLIFLETSQLEASPLLH----------------------------------

Query:  ------GEDQAWKGIKATLNDYAAKVKTRETRNL-AQYTLSNQRGMHPYEHPP
              GEDQ WKG+KATL+DYA +V+ R  +   A Y L  Q G    ++ P
Subjt:  ------GEDQAWKGIKATLNDYAAKVKTRETRNL-AQYTLSNQRGMHPYEHPP

A0A5D3DVS4 Conserved oligomeric Golgi complex subunit 53.5e-3053.85Show/hide
Query:  RHASLVRPLSESGELRMARDMAGLQLAVGQNLFPVEQLGAPYQALHAFRPLIFLETSQLEASPLLH----------------------------------
        RHASLVRPLSESG+LRMARDMA L+LAVGQNLFPVEQLGAPY+AL AFRPLIFLETSQLEASPLLH                                  
Subjt:  RHASLVRPLSESGELRMARDMAGLQLAVGQNLFPVEQLGAPYQALHAFRPLIFLETSQLEASPLLH----------------------------------

Query:  ------GEDQAWKGIKATLNDYAAKVKTRETRNL-AQYTLSNQRGMHPYEHPPLLK
              GEDQ WKG+KATL+DYA +V+ R  +   A Y L  Q G+     P  L+
Subjt:  ------GEDQAWKGIKATLNDYAAKVKTRETRNL-AQYTLSNQRGMHPYEHPPLLK

A0A6J1G6L1 Conserved oligomeric Golgi complex subunit 52.7e-3057.93Show/hide
Query:  RHASLVRPLSESGELRMARDMAGLQLAVGQNLFPVEQLGAPYQALHAFRPLIFLETSQLEASPLLH----------------------------------
        RHASLVRPLSESG+LRMARDMA L+LAVGQNL+PVEQLGAPY+AL AFRPLIFLETSQLEASPLLH                                  
Subjt:  RHASLVRPLSESGELRMARDMAGLQLAVGQNLFPVEQLGAPYQALHAFRPLIFLETSQLEASPLLH----------------------------------

Query:  ------GEDQAWKGIKATLNDYAAKVKTRETRNL-AQYTLSNQRG
              GEDQ WKGIKATL+DYAAKV+ R  +   A Y L  Q G
Subjt:  ------GEDQAWKGIKATLNDYAAKVKTRETRNL-AQYTLSNQRG

A0A6J1I3W6 Conserved oligomeric Golgi complex subunit 52.7e-3057.93Show/hide
Query:  RHASLVRPLSESGELRMARDMAGLQLAVGQNLFPVEQLGAPYQALHAFRPLIFLETSQLEASPLLH----------------------------------
        RHASLVRPLSESG+LRMARDMA L+LAVGQNL+PVEQLGAPY+AL AFRPLIFLETSQLEASPLLH                                  
Subjt:  RHASLVRPLSESGELRMARDMAGLQLAVGQNLFPVEQLGAPYQALHAFRPLIFLETSQLEASPLLH----------------------------------

Query:  ------GEDQAWKGIKATLNDYAAKVKTRETRNL-AQYTLSNQRG
              GEDQ WKGIKATL+DYAAKV+ R  +   A Y L  Q G
Subjt:  ------GEDQAWKGIKATLNDYAAKVKTRETRNL-AQYTLSNQRG

SwissProt top hitse value%identityAlignment
Q8C0L8 Conserved oligomeric Golgi complex subunit 52.8e-0847.62Show/hide
Query:  RHASLVRPLSESGELRMARDMAGLQLAVGQNLFPVEQLGAPYQALHAFRPLIFLETSQLEASP
        R+ASL+RPL E G+LR+A D A ++LAVG     V  LG  Y+ L +FRPL+F  +  +  SP
Subjt:  RHASLVRPLSESGELRMARDMAGLQLAVGQNLFPVEQLGAPYQALHAFRPLIFLETSQLEASP

Q9C9V9 Conserved oligomeric Golgi complex subunit 57.1e-2850.34Show/hide
Query:  RHASLVRPLSESGELRMARDMAGLQLAVGQNLFPVEQLGAPYQALHAFRPLIFLETSQLEASPLLHG---------------------------------
        RHASLVRPLSE G+LRMA+DMA L+LAVGQNLFPVEQLGAPY+AL AFRPL+FLETSQ+ +SPL++                                  
Subjt:  RHASLVRPLSESGELRMARDMAGLQLAVGQNLFPVEQLGAPYQALHAFRPLIFLETSQLEASPLLHG---------------------------------

Query:  -------EDQAWKGIKATLNDYAAKVKTRETRNLAQ-YTLSNQRG
               EDQ WKGIKATL+DYA K+++R  +  +  Y L  Q G
Subjt:  -------EDQAWKGIKATLNDYAAKVKTRETRNLAQ-YTLSNQRG

Q9UP83 Conserved oligomeric Golgi complex subunit 51.5e-0947.69Show/hide
Query:  RHASLVRPLSESGELRMARDMAGLQLAVGQNLFPVEQLGAPYQALHAFRPLIFLETSQLEASPLL
        RHASL+RPL E G++R+A D A ++LAVG     V  LG  Y+ L +FRPL+F  +  + +SP L
Subjt:  RHASLVRPLSESGELRMARDMAGLQLAVGQNLFPVEQLGAPYQALHAFRPLIFLETSQLEASPLL

Arabidopsis top hitse value%identityAlignment
AT1G67930.1 Golgi transport complex protein-related5.0e-2950.34Show/hide
Query:  RHASLVRPLSESGELRMARDMAGLQLAVGQNLFPVEQLGAPYQALHAFRPLIFLETSQLEASPLLHG---------------------------------
        RHASLVRPLSE G+LRMA+DMA L+LAVGQNLFPVEQLGAPY+AL AFRPL+FLETSQ+ +SPL++                                  
Subjt:  RHASLVRPLSESGELRMARDMAGLQLAVGQNLFPVEQLGAPYQALHAFRPLIFLETSQLEASPLLHG---------------------------------

Query:  -------EDQAWKGIKATLNDYAAKVKTRETRNLAQ-YTLSNQRG
               EDQ WKGIKATL+DYA K+++R  +  +  Y L  Q G
Subjt:  -------EDQAWKGIKATLNDYAAKVKTRETRNLAQ-YTLSNQRG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAAGTATAAAGTTGGCAAGGTTCTTCTCTTGCTGGCTGAAAGAACTGAATGCAGGCATGCTTCTCTTGTCAGACCTCTTTCTGAATCAGGAGAACTACGAATGGC
TAGGGACATGGCTGGGCTGCAGTTAGCTGTGGGTCAAAATTTGTTCCCCGTAGAACAACTTGGTGCACCATATCAAGCTCTTCATGCATTTCGTCCTCTTATATTTCTTG
AAACATCGCAACTGGAAGCATCTCCACTACTTCACGGTGAGGATCAAGCTTGGAAAGGTATCAAAGCAACTCTCAATGATTATGCTGCCAAGGTAAAGACCAGAGAGACA
AGGAATTTAGCTCAGTATACCCTCAGTAACCAGAGGGGCATGCATCCTTATGAACATCCACCATTGTTGAAGGGCGAGACACTGCTAGCTCATTGGCAACGGCGTAACCT
TGGTGGCGAGGTAAGGTTTAAACTTTCGCACTGCTTCTTTATCTTTAAAGTTCTCTATAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCAAGTATAAAGTTGGCAAGGTTCTTCTCTTGCTGGCTGAAAGAACTGAATGCAGGCATGCTTCTCTTGTCAGACCTCTTTCTGAATCAGGAGAACTACGAATGGC
TAGGGACATGGCTGGGCTGCAGTTAGCTGTGGGTCAAAATTTGTTCCCCGTAGAACAACTTGGTGCACCATATCAAGCTCTTCATGCATTTCGTCCTCTTATATTTCTTG
AAACATCGCAACTGGAAGCATCTCCACTACTTCACGGTGAGGATCAAGCTTGGAAAGGTATCAAAGCAACTCTCAATGATTATGCTGCCAAGGTAAAGACCAGAGAGACA
AGGAATTTAGCTCAGTATACCCTCAGTAACCAGAGGGGCATGCATCCTTATGAACATCCACCATTGTTGAAGGGCGAGACACTGCTAGCTCATTGGCAACGGCGTAACCT
TGGTGGCGAGGTAAGGTTTAAACTTTCGCACTGCTTCTTTATCTTTAAAGTTCTCTATAATTGACCAGACAGTTAAACTAGAACTGCATCCCTCTCTATTTGTGCTATCT
TCATCCAAAGCTGAGCTGATAAACAACTAAAATCAATAATGGAGGAGTTATGAATTGTGTTGAAGCAGTAGGACATTGATGGTGGCCTGGCCTGGTCTGGTCTGGCCTGG
CGCTGGCTGGGCTCCAAAGAACACAACTGAAATGTACAATTCACTCTTTGGTAATTAAAAAAATCTGACACAGACACCCACACCCACCCACACCCACACGCATTGGGAA
Protein sequenceShow/hide protein sequence
MSKYKVGKVLLLLAERTECRHASLVRPLSESGELRMARDMAGLQLAVGQNLFPVEQLGAPYQALHAFRPLIFLETSQLEASPLLHGEDQAWKGIKATLNDYAAKVKTRET
RNLAQYTLSNQRGMHPYEHPPLLKGETLLAHWQRRNLGGEVRFKLSHCFFIFKVLYN