; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg03438 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg03438
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionConserved oligomeric Golgi complex subunit 5
Genome locationCarg_Chr20:1315518..1316470
RNA-Seq ExpressionCarg03438
SyntenyCarg03438
Gene Ontology termsGO:0006891 - intra-Golgi vesicle-mediated transport (biological process)
GO:0016020 - membrane (cellular component)
GO:0017119 - Golgi transport complex (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054615.1 conserved oligomeric Golgi complex subunit 5 [Cucumis melo var. makuwa]1.2e-2976.09Show/hide
Query:  VRHVWFELSEPRNVVFTEPFQFSNFHRTTKLLHHTIRAFRFSKKLRDLASASVEEPEKVDLAKAAQLRFEKLSLCYEFDLAGVDAVDEELKW
        VRHV  ELSEPRNVVFT+  QFSN H+TT+LL HTIRA R SKKLRDLASAS ++PEK+DL+KAAQL  E LSLC EFDLAG+D VDEELKW
Subjt:  VRHVWFELSEPRNVVFTEPFQFSNFHRTTKLLHHTIRAFRFSKKLRDLASASVEEPEKVDLAKAAQLRFEKLSLCYEFDLAGVDAVDEELKW
KAG6570577.1 Conserved oligomeric Golgi complex subunit 5, partial [Cucurbita argyrosperma subsp. sororia]3.2e-5978.88Show/hide
Query:  MGKKKTWSLKKVRKELWPWRFSLFGRNPMDLRMIHFVVDNVFFKIVSVVEAIVLVSTLCFFYLCCGVRHVWFELSEPRNVVFTEPFQFSNFHRTTKLLHH
        MGKKKTWSLKKVRKELWPWRFSLFGRNPMDL+MIHFVVDNVFFKIVSVVEAIVL                                 FSNFHRTTKLLHH
Subjt:  MGKKKTWSLKKVRKELWPWRFSLFGRNPMDLRMIHFVVDNVFFKIVSVVEAIVLVSTLCFFYLCCGVRHVWFELSEPRNVVFTEPFQFSNFHRTTKLLHH

Query:  TIRAFRFSKKLRDLASASVEEPEKVDLAKAAQLRFEKLSLCYEFDLAGVDAVDEELKWGMH
        TIRAFRFSKKLRDLASASVEEPEKVDLAKAAQLRFEKLSLCYEFDLAGVDAVDEELKWGMH
Subjt:  TIRAFRFSKKLRDLASASVEEPEKVDLAKAAQLRFEKLSLCYEFDLAGVDAVDEELKWGMH
KAG7010430.1 hypothetical protein SDJN02_27223, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-86100Show/hide
Query:  MGKKKTWSLKKVRKELWPWRFSLFGRNPMDLRMIHFVVDNVFFKIVSVVEAIVLVSTLCFFYLCCGVRHVWFELSEPRNVVFTEPFQFSNFHRTTKLLHH
        MGKKKTWSLKKVRKELWPWRFSLFGRNPMDLRMIHFVVDNVFFKIVSVVEAIVLVSTLCFFYLCCGVRHVWFELSEPRNVVFTEPFQFSNFHRTTKLLHH
Subjt:  MGKKKTWSLKKVRKELWPWRFSLFGRNPMDLRMIHFVVDNVFFKIVSVVEAIVLVSTLCFFYLCCGVRHVWFELSEPRNVVFTEPFQFSNFHRTTKLLHH

Query:  TIRAFRFSKKLRDLASASVEEPEKVDLAKAAQLRFEKLSLCYEFDLAGVDAVDEELKWGMH
        TIRAFRFSKKLRDLASASVEEPEKVDLAKAAQLRFEKLSLCYEFDLAGVDAVDEELKWGMH
Subjt:  TIRAFRFSKKLRDLASASVEEPEKVDLAKAAQLRFEKLSLCYEFDLAGVDAVDEELKWGMH
XP_004145805.1 conserved oligomeric Golgi complex subunit 5 [Cucumis sativus]1.6e-2976.09Show/hide
Query:  VRHVWFELSEPRNVVFTEPFQFSNFHRTTKLLHHTIRAFRFSKKLRDLASASVEEPEKVDLAKAAQLRFEKLSLCYEFDLAGVDAVDEELKW
        VRHV  ELSEPRNVVFT+  QFSN H+TT+LL HTIRA R SKKLR+LASAS ++PEK+DLAKAAQL  E LSLC EFDLAG+D VDEELKW
Subjt:  VRHVWFELSEPRNVVFTEPFQFSNFHRTTKLLHHTIRAFRFSKKLRDLASASVEEPEKVDLAKAAQLRFEKLSLCYEFDLAGVDAVDEELKW
XP_008456343.1 PREDICTED: conserved oligomeric Golgi complex subunit 5 [Cucumis melo]1.2e-2976.09Show/hide
Query:  VRHVWFELSEPRNVVFTEPFQFSNFHRTTKLLHHTIRAFRFSKKLRDLASASVEEPEKVDLAKAAQLRFEKLSLCYEFDLAGVDAVDEELKW
        VRHV  ELSEPRNVVFT+  QFSN H+TT+LL HTIRA R SKKLRDLASAS ++PEK+DL+KAAQL  E LSLC EFDLAG+D VDEELKW
Subjt:  VRHVWFELSEPRNVVFTEPFQFSNFHRTTKLLHHTIRAFRFSKKLRDLASASVEEPEKVDLAKAAQLRFEKLSLCYEFDLAGVDAVDEELKW
TrEMBL top hitse value%identityAlignment
A0A0A0KD96 Conserved oligomeric Golgi complex subunit 57.6e-3076.09Show/hide
Query:  VRHVWFELSEPRNVVFTEPFQFSNFHRTTKLLHHTIRAFRFSKKLRDLASASVEEPEKVDLAKAAQLRFEKLSLCYEFDLAGVDAVDEELKW
        VRHV  ELSEPRNVVFT+  QFSN H+TT+LL HTIRA R SKKLR+LASAS ++PEK+DLAKAAQL  E LSLC EFDLAG+D VDEELKW
Subjt:  VRHVWFELSEPRNVVFTEPFQFSNFHRTTKLLHHTIRAFRFSKKLRDLASASVEEPEKVDLAKAAQLRFEKLSLCYEFDLAGVDAVDEELKW
A0A1S3C499 Conserved oligomeric Golgi complex subunit 55.8e-3076.09Show/hide
Query:  VRHVWFELSEPRNVVFTEPFQFSNFHRTTKLLHHTIRAFRFSKKLRDLASASVEEPEKVDLAKAAQLRFEKLSLCYEFDLAGVDAVDEELKW
        VRHV  ELSEPRNVVFT+  QFSN H+TT+LL HTIRA R SKKLRDLASAS ++PEK+DL+KAAQL  E LSLC EFDLAG+D VDEELKW
Subjt:  VRHVWFELSEPRNVVFTEPFQFSNFHRTTKLLHHTIRAFRFSKKLRDLASASVEEPEKVDLAKAAQLRFEKLSLCYEFDLAGVDAVDEELKW
A0A5D3DVS4 Conserved oligomeric Golgi complex subunit 55.8e-3076.09Show/hide
Query:  VRHVWFELSEPRNVVFTEPFQFSNFHRTTKLLHHTIRAFRFSKKLRDLASASVEEPEKVDLAKAAQLRFEKLSLCYEFDLAGVDAVDEELKW
        VRHV  ELSEPRNVVFT+  QFSN H+TT+LL HTIRA R SKKLRDLASAS ++PEK+DL+KAAQL  E LSLC EFDLAG+D VDEELKW
Subjt:  VRHVWFELSEPRNVVFTEPFQFSNFHRTTKLLHHTIRAFRFSKKLRDLASASVEEPEKVDLAKAAQLRFEKLSLCYEFDLAGVDAVDEELKW
A0A6J1G6L1 Conserved oligomeric Golgi complex subunit 52.4e-2875Show/hide
Query:  VRHVWFELSEPRNVVFTEPFQFSNFHRTTKLLHHTIRAFRFSKKLRDLASASVEEPEKVDLAKAAQLRFEKLSLCYEFDLAGVDAVDEELKW
        VR V  ELSEPRNVV T+  QFSN H TT+LL HTIRA R SKKLRDLASAS +EPEK+DLAKAAQL  E LSLC E+DLAG+D VDEELKW
Subjt:  VRHVWFELSEPRNVVFTEPFQFSNFHRTTKLLHHTIRAFRFSKKLRDLASASVEEPEKVDLAKAAQLRFEKLSLCYEFDLAGVDAVDEELKW
A0A6J1I3W6 Conserved oligomeric Golgi complex subunit 52.4e-2875Show/hide
Query:  VRHVWFELSEPRNVVFTEPFQFSNFHRTTKLLHHTIRAFRFSKKLRDLASASVEEPEKVDLAKAAQLRFEKLSLCYEFDLAGVDAVDEELKW
        VR V  ELSEPRNVV T+  QFSN H TT+LL HTIRA R SKKLRDLASAS +EPEK+DLAKAAQL  E LSLC E+DLAG+D VDEELKW
Subjt:  VRHVWFELSEPRNVVFTEPFQFSNFHRTTKLLHHTIRAFRFSKKLRDLASASVEEPEKVDLAKAAQLRFEKLSLCYEFDLAGVDAVDEELKW
SwissProt top hitse value%identityAlignment
Q9C9V9 Conserved oligomeric Golgi complex subunit 52.9e-1848.91Show/hide
Query:  VRHVWFELSEPRNVVFTEPFQFSNFHRTTKLLHHTIRAFRFSKKLRDLASASVEEPEKVDLAKAAQLRFEKLSLCYEFDLAGVDAVDEELKW
        +R V  +LSEP   + ++  Q SN H  T+LL H++R  R SKKLRDL  A   +P+K+DL KAAQ  FE L++C E+DL G+D +DEE+K+
Subjt:  VRHVWFELSEPRNVVFTEPFQFSNFHRTTKLLHHTIRAFRFSKKLRDLASASVEEPEKVDLAKAAQLRFEKLSLCYEFDLAGVDAVDEELKW
Arabidopsis top hitse value%identityAlignment
AT1G06475.1 unknown protein2.6e-0660.53Show/hide
Query:  MDLRMIHFVVDNVFFKIVSVVEAIVLVSTLCFFYLCCG
        +++ M+  +VD V +K++ VVEA VLVSTLCFFYLCCG
Subjt:  MDLRMIHFVVDNVFFKIVSVVEAIVLVSTLCFFYLCCG
AT1G67930.1 Golgi transport complex protein-related2.0e-1948.91Show/hide
Query:  VRHVWFELSEPRNVVFTEPFQFSNFHRTTKLLHHTIRAFRFSKKLRDLASASVEEPEKVDLAKAAQLRFEKLSLCYEFDLAGVDAVDEELKW
        +R V  +LSEP   + ++  Q SN H  T+LL H++R  R SKKLRDL  A   +P+K+DL KAAQ  FE L++C E+DL G+D +DEE+K+
Subjt:  VRHVWFELSEPRNVVFTEPFQFSNFHRTTKLLHHTIRAFRFSKKLRDLASASVEEPEKVDLAKAAQLRFEKLSLCYEFDLAGVDAVDEELKW
AT5G26790.1 unknown protein1.9e-0440.35Show/hide
Query:  WPWRFSLFGRNPM-------DLRMIHFVVDNVFFKIVSVVEAIVLVSTLCFFYLCCG
        WP  F+  G  P        +L ++  VVD+V +K+V+  E++ LVS LCFF+L CG
Subjt:  WPWRFSLFGRNPM-------DLRMIHFVVDNVFFKIVSVVEAIVLVSTLCFFYLCCG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAGAAGAAGACATGGTCGTTGAAGAAGGTGAGGAAGGAGCTGTGGCCATGGCGGTTTTCGCTCTTCGGAAGGAACCCAATGGATCTTCGGATGATTCATTTCGT
GGTTGATAATGTGTTCTTCAAGATCGTCTCTGTCGTGGAAGCCATTGTTTTGGTCTCTACACTTTGTTTTTTCTATCTATGCTGTGGCGTCCGCCATGTCTGGTTCGAGC
TTTCTGAACCTAGAAATGTCGTTTTTACCGAACCGTTTCAGTTCTCCAATTTTCACCGAACTACCAAGCTTCTTCACCATACTATTCGTGCTTTTCGTTTTTCGAAGAAG
CTTAGGGACCTTGCTTCTGCGTCTGTCGAAGAGCCTGAGAAGGTGGATCTCGCTAAGGCTGCCCAGCTGCGCTTTGAGAAATTGAGCCTTTGCTATGAGTTTGACCTAGC
GGGCGTTGATGCCGTTGACGAGGAGTTGAAATGGGGGATGCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAAGAAGAAGACATGGTCGTTGAAGAAGGTGAGGAAGGAGCTGTGGCCATGGCGGTTTTCGCTCTTCGGAAGGAACCCAATGGATCTTCGGATGATTCATTTCGT
GGTTGATAATGTGTTCTTCAAGATCGTCTCTGTCGTGGAAGCCATTGTTTTGGTCTCTACACTTTGTTTTTTCTATCTATGCTGTGGCGTCCGCCATGTCTGGTTCGAGC
TTTCTGAACCTAGAAATGTCGTTTTTACCGAACCGTTTCAGTTCTCCAATTTTCACCGAACTACCAAGCTTCTTCACCATACTATTCGTGCTTTTCGTTTTTCGAAGAAG
CTTAGGGACCTTGCTTCTGCGTCTGTCGAAGAGCCTGAGAAGGTGGATCTCGCTAAGGCTGCCCAGCTGCGCTTTGAGAAATTGAGCCTTTGCTATGAGTTTGACCTAGC
GGGCGTTGATGCCGTTGACGAGGAGTTGAAATGGGGGATGCATTGA
Protein sequenceShow/hide protein sequence
MGKKKTWSLKKVRKELWPWRFSLFGRNPMDLRMIHFVVDNVFFKIVSVVEAIVLVSTLCFFYLCCGVRHVWFELSEPRNVVFTEPFQFSNFHRTTKLLHHTIRAFRFSKK
LRDLASASVEEPEKVDLAKAAQLRFEKLSLCYEFDLAGVDAVDEELKWGMH