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Carg03537 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg03537
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionvillin-3-like
Genome locationCarg_Chr14:2124534..2126092
RNA-Seq ExpressionCarg03537
SyntenyCarg03537
Gene Ontology termsGO:0051693 - actin filament capping (biological process)
GO:0051015 - actin filament binding (molecular function)
InterPro domainsIPR007122 - Villin/Gelsolin
IPR029006 - ADF-H/Gelsolin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580834.1 Villin-2, partial [Cucurbita argyrosperma subsp. sororia]5.3e-21100Show/hide
Query:  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ
        MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ
Subjt:  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ

KAG7017589.1 Villin-3, partial [Cucurbita argyrosperma subsp. argyrosperma]4.3e-55100Show/hide
Query:  LCGPVFSHSAFLRFLLTPLSSTLCFQRVWEISVQFLLKTKETVAEKYSPMSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIIL
        LCGPVFSHSAFLRFLLTPLSSTLCFQRVWEISVQFLLKTKETVAEKYSPMSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIIL
Subjt:  LCGPVFSHSAFLRFLLTPLSSTLCFQRVWEISVQFLLKTKETVAEKYSPMSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIIL

Query:  QAFHSSSSRL
        QAFHSSSSRL
Subjt:  QAFHSSSSRL

XP_017414589.1 PREDICTED: villin-3-like isoform X1 [Vigna angularis]4.5e-2096.15Show/hide
Query:  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ
        MSSSAK LDPAFQ VGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ
Subjt:  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ

XP_022935422.1 villin-3-like [Cucurbita moschata]5.3e-21100Show/hide
Query:  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ
        MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ
Subjt:  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ

XP_022982830.1 villin-3-like [Cucurbita maxima]2.6e-2098.08Show/hide
Query:  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ
        MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSD+GKFYMGDSYIILQ
Subjt:  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ

TrEMBL top hitse value%identityAlignment
A0A0L9TVI9 HP domain-containing protein2.2e-2096.15Show/hide
Query:  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ
        MSSSAK LDPAFQ VGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ
Subjt:  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ

A0A1S3V5B3 villin-3 isoform X22.2e-2096.15Show/hide
Query:  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ
        MSSSAK LDPAFQ VGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ
Subjt:  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ

A0A1S3V5S8 villin-3 isoform X12.2e-2096.15Show/hide
Query:  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ
        MSSSAK LDPAFQ VGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ
Subjt:  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ

A0A6J1F5I1 villin-3-like2.6e-21100Show/hide
Query:  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ
        MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ
Subjt:  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ

A0A6J1J3Y3 villin-3-like1.3e-2098.08Show/hide
Query:  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ
        MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSD+GKFYMGDSYIILQ
Subjt:  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ

SwissProt top hitse value%identityAlignment
B8ATT7 Villin-45.4e-1671.15Show/hide
Query:  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ
        MS S K +DPAF+ VGQ+ G E+WRIENF+PVP+P S HGKFYMGDSYIIL+
Subjt:  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ

O81644 Villin-24.8e-1775.51Show/hide
Query:  SAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ
        S K LDPAFQ  GQ+ GTEIWRIENF+ VP+PKS+HGKFYMGD+YI+LQ
Subjt:  SAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ

O81645 Villin-32.3e-1978.85Show/hide
Query:  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ
        MS S K LDPAFQ VGQ+ GTEIWRIENF+PVP+PKS+HGKFYMGD+YI+LQ
Subjt:  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ

Q0JAD9 Villin-45.4e-1671.15Show/hide
Query:  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ
        MS S K +DPAF+ VGQ+ G E+WRIENF+PVP+P S HGKFYMGDSYIIL+
Subjt:  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ

Q10L71 Villin-26.3e-1773.08Show/hide
Query:  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ
        MSS+   LDPAFQ VGQ+ GTEIWRI++F+PVPLPK+D+GKFY GDSYI+LQ
Subjt:  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ

Arabidopsis top hitse value%identityAlignment
AT2G41740.1 villin 23.4e-1875.51Show/hide
Query:  SAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ
        S K LDPAFQ  GQ+ GTEIWRIENF+ VP+PKS+HGKFYMGD+YI+LQ
Subjt:  SAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ

AT3G57410.1 villin 31.6e-2078.85Show/hide
Query:  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ
        MS S K LDPAFQ VGQ+ GTEIWRIENF+PVP+PKS+HGKFYMGD+YI+LQ
Subjt:  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ

AT4G30160.1 villin 46.1e-1565.38Show/hide
Query:  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ
        MS S + LDPAFQ  GQ+ G EIWRIENF P P+PKS  GKF+ GDSYI+L+
Subjt:  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ

AT4G30160.2 villin 46.1e-1565.38Show/hide
Query:  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ
        MS S + LDPAFQ  GQ+ G EIWRIENF P P+PKS  GKF+ GDSYI+L+
Subjt:  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQ

AT5G57320.1 villin, putative1.5e-1354.1Show/hide
Query:  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQAFHSSSSRL
        M+ S + LD A Q  GQ+ G EIWRIENF+PV +P+  HGKF+ GDSYI+L+   S S  L
Subjt:  MSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQAFHSSSSRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTCTGCGGCCCCGTCTTCTCCCATTCCGCTTTCTTGCGTTTCTTACTCACTCCTCTCTCCTCCACCCTTTGTTTCCAGAGGGTGTGGGAGATCTCCGTGCAGTTTCTCTT
GAAAACTAAAGAGACAGTAGCAGAGAAATATTCTCCAATGTCTAGCTCTGCCAAAGCCTTGGATCCTGCATTTCAGGCAGTTGGACAAAGAGTTGGAACAGAAATCTGGC
GAATTGAGAACTTTCAGCCTGTTCCGTTGCCAAAGTCGGACCATGGGAAATTTTACATGGGGGATAGTTACATAATACTGCAGGCATTTCATTCTAGTTCTTCTCGTCTT
TAA
mRNA sequenceShow/hide mRNA sequence
CTCTGCGGCCCCGTCTTCTCCCATTCCGCTTTCTTGCGTTTCTTACTCACTCCTCTCTCCTCCACCCTTTGTTTCCAGAGGGTGTGGGAGATCTCCGTGCAGTTTCTCTT
GAAAACTAAAGAGACAGTAGCAGAGAAATATTCTCCAATGTCTAGCTCTGCCAAAGCCTTGGATCCTGCATTTCAGGCAGTTGGACAAAGAGTTGGAACAGAAATCTGGC
GAATTGAGAACTTTCAGCCTGTTCCGTTGCCAAAGTCGGACCATGGGAAATTTTACATGGGGGATAGTTACATAATACTGCAGGCATTTCATTCTAGTTCTTCTCGTCTT
TAA
Protein sequenceShow/hide protein sequence
LCGPVFSHSAFLRFLLTPLSSTLCFQRVWEISVQFLLKTKETVAEKYSPMSSSAKALDPAFQAVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQAFHSSSSRL