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Carg03560 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg03560
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr14:1978719..1979502
RNA-Seq ExpressionCarg03560
SyntenyCarg03560
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017566.1 hypothetical protein SDJN02_19432, partial [Cucurbita argyrosperma subsp. argyrosperma]3.6e-54100Show/hide
Query:  MSNSSFLAAAGTKVGGSELHGDSLRSFREECTWKLGHNSTLTIQRQAASNGKIRLNTQAPDGSIRSGFHWNQRAEVQQHLKVTSADAAGLSRRHLLIAQV
        MSNSSFLAAAGTKVGGSELHGDSLRSFREECTWKLGHNSTLTIQRQAASNGKIRLNTQAPDGSIRSGFHWNQRAEVQQHLKVTSADAAGLSRRHLLIAQV
Subjt:  MSNSSFLAAAGTKVGGSELHGDSLRSFREECTWKLGHNSTLTIQRQAASNGKIRLNTQAPDGSIRSGFHWNQRAEVQQHLKVTSADAAGLSRRHLLIAQV

Query:  PCMASYYLD
        PCMASYYLD
Subjt:  PCMASYYLD
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAATTCAAGTTTCCTGGCAGCGGCTGGCACAAAAGTTGGCGGTAGTGAATTACATGGCGACTCCTTGAGGTCGTTTCGAGAAGAATGTACATGGAAATTGGGTCA
CAATTCTACACTTACCATTCAAAGGCAAGCAGCTAGCAATGGCAAAATCAGACTAAACACACAAGCACCAGACGGTTCCATAAGGAGTGGATTTCACTGGAACCAGAGAG
CTGAAGTGCAGCAGCACCTCAAAGTGACCAGTGCAGATGCTGCTGGGTTGAGTCGAAGGCACCTGCTGATTGCCCAAGTTCCATGTATGGCCTCCTACTACCTTGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGAATTCAAGTTTCCTGGCAGCGGCTGGCACAAAAGTTGGCGGTAGTGAATTACATGGCGACTCCTTGAGGTCGTTTCGAGAAGAATGTACATGGAAATTGGGTCA
CAATTCTACACTTACCATTCAAAGGCAAGCAGCTAGCAATGGCAAAATCAGACTAAACACACAAGCACCAGACGGTTCCATAAGGAGTGGATTTCACTGGAACCAGAGAG
CTGAAGTGCAGCAGCACCTCAAAGTGACCAGTGCAGATGCTGCTGGGTTGAGTCGAAGGCACCTGCTGATTGCCCAAGTTCCATGTATGGCCTCCTACTACCTTGATTAG
Protein sequenceShow/hide protein sequence
MSNSSFLAAAGTKVGGSELHGDSLRSFREECTWKLGHNSTLTIQRQAASNGKIRLNTQAPDGSIRSGFHWNQRAEVQQHLKVTSADAAGLSRRHLLIAQVPCMASYYLD