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Carg03563 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg03563
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionMyb family transcription factor family protein
Genome locationCarg_Chr14:1965819..1966304
RNA-Seq ExpressionCarg03563
SyntenyCarg03563
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsIPR008480 - Protein of unknown function DUF761, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580813.1 hypothetical protein SDJN03_20815, partial [Cucurbita argyrosperma subsp. sororia]1.8e-81100Show/hide
Query:  MKMVSLSPSSSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFKRNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWGDNSAAGA
        MKMVSLSPSSSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFKRNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWGDNSAAGA
Subjt:  MKMVSLSPSSSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFKRNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWGDNSAAGA

Query:  ADHLAGYLQWLEDRDKEEKLCRHVNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL
        ADHLAGYLQWLEDRDKEEKLCRHVNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL
Subjt:  ADHLAGYLQWLEDRDKEEKLCRHVNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL

XP_022935250.1 uncharacterized protein LOC111442186 [Cucurbita moschata]6.9e-7897.52Show/hide
Query:  MKMVSLSPSSSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFKRNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWGDNSAAGA
        MKMVSLSPSSSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFKRNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWGDNS   A
Subjt:  MKMVSLSPSSSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFKRNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWGDNSAAGA

Query:  ADHLAGYLQWLEDRDKEEKLCRHVNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL
        ADHLAGYLQWLEDRDKEE+LCRHVNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL
Subjt:  ADHLAGYLQWLEDRDKEEKLCRHVNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL

XP_022983138.1 uncharacterized protein LOC111481779 [Cucurbita maxima]8.5e-7696.27Show/hide
Query:  MKMVSLSPSSSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFKRNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWGDNSAAGA
        MKMVSLSP SSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFKRNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTW DNS +GA
Subjt:  MKMVSLSPSSSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFKRNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWGDNSAAGA

Query:  ADHLAGYLQWLEDRDKEEKLCRHVNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL
        ADHLAGYLQWLEDRDKEE+LCRH NEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL
Subjt:  ADHLAGYLQWLEDRDKEEKLCRHVNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL

XP_023526429.1 uncharacterized protein LOC111789933 [Cucurbita pepo subsp. pepo]1.4e-7896.89Show/hide
Query:  MKMVSLSPSSSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFKRNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWGDNSAAGA
        MKMVSLSPSSSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFKRNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTW DNSAAGA
Subjt:  MKMVSLSPSSSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFKRNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWGDNSAAGA

Query:  ADHLAGYLQWLEDRDKEEKLCRHVNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL
        ADHL GYLQWLE +DKEE+LCRHVNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL
Subjt:  ADHLAGYLQWLEDRDKEEKLCRHVNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL

XP_038906153.1 uncharacterized protein LOC120092033 [Benincasa hispida]5.9e-4565.71Show/hide
Query:  MVSLSPSS---SSLQIFPSSSS---------LKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFKRNKNKLLFGSFRLHYNWCS-SSNY---HVA
        M SL+ SS   SSLQI PSSSS          KA+LQTLILSLARAISRAKTTA HILKQANHQ AIA KRNK KLL+GSFRLHYNWCS SSNY   HV 
Subjt:  MVSLSPSS---SSLQIFPSSSS---------LKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFKRNKNKLLFGSFRLHYNWCS-SSNY---HVA

Query:  PPPLTWG---DNSAAGAADHLAGYLQWLEDRDKEEKLCRH--VNEIDKLADIFIARCHEKFRLEKQESYRKFQEM
        PP +TW         G  D L GYL+WLE+R+   K+     VNEIDKLA+IFIAR HEKF+LEKQESYR+FQ+M
Subjt:  PPPLTWG---DNSAAGAADHLAGYLQWLEDRDKEEKLCRH--VNEIDKLADIFIARCHEKFRLEKQESYRKFQEM

TrEMBL top hitse value%identityAlignment
A0A0A0LBV5 Uncharacterized protein6.4e-3760.89Show/hide
Query:  SPSSSSLQIFPSSSS--------LKALLQTLILSLARAISRAKTTALHILKQANHQSA-IAFKRNKNKLLFGSFRLHYNWCS-SSN--YHVAPPPLT--W
        S SSSSLQ+ PS SS         KALLQTLILSLARAISRAKTTA         QSA  A KRNK KLL+GSFRLHYNWCS SSN   HV P  LT   
Subjt:  SPSSSSLQIFPSSSS--------LKALLQTLILSLARAISRAKTTALHILKQANHQSA-IAFKRNKNKLLFGSFRLHYNWCS-SSN--YHVAPPPLT--W

Query:  GDNSAAGAADHLAGYLQWLEDRDKEEKLCRH-----------VNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARS
        G     G  D L GYLQWLE+RD  +K   +           VNEIDKLA+IFIARCHEKF+LEKQESYR+FQ+M ARS
Subjt:  GDNSAAGAADHLAGYLQWLEDRDKEEKLCRH-----------VNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARS

A0A1S3B8H1 uncharacterized protein LOC1034871584.9e-3760.77Show/hide
Query:  SLSPSSSSLQIFPSSSS--------LKALLQTLILSLARAISRAKTTALHILKQANHQSA-IAFKRNKNKLLFGSFRLHYNWCS-SSN--YHVAPPPLTW
        S S SSSSLQ+ PS SS         KALLQTLI SLARAISRAKTTA         QSA IA KRNK KLL+GSFRLHYNWCS SSN   HV P  LT+
Subjt:  SLSPSSSSLQIFPSSSS--------LKALLQTLILSLARAISRAKTTALHILKQANHQSA-IAFKRNKNKLLFGSFRLHYNWCS-SSN--YHVAPPPLTW

Query:  GDNSAAGA-ADHLAGYLQWLEDRDKEEKLCRH------------VNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARS
              GA  D L GYLQWLE+RD  +K   +            VNEIDKLA+IFIARCHEKF+LEKQESYR+FQ+M ARS
Subjt:  GDNSAAGA-ADHLAGYLQWLEDRDKEEKLCRH------------VNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARS

A0A5A7TJT8 Uncharacterized protein4.9e-3760.77Show/hide
Query:  SLSPSSSSLQIFPSSSS--------LKALLQTLILSLARAISRAKTTALHILKQANHQSA-IAFKRNKNKLLFGSFRLHYNWCS-SSN--YHVAPPPLTW
        S S SSSSLQ+ PS SS         KALLQTLI SLARAISRAKTTA         QSA IA KRNK KLL+GSFRLHYNWCS SSN   HV P  LT+
Subjt:  SLSPSSSSLQIFPSSSS--------LKALLQTLILSLARAISRAKTTALHILKQANHQSA-IAFKRNKNKLLFGSFRLHYNWCS-SSN--YHVAPPPLTW

Query:  GDNSAAGA-ADHLAGYLQWLEDRDKEEKLCRH------------VNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARS
              GA  D L GYLQWLE+RD  +K   +            VNEIDKLA+IFIARCHEKF+LEKQESYR+FQ+M ARS
Subjt:  GDNSAAGA-ADHLAGYLQWLEDRDKEEKLCRH------------VNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARS

A0A6J1FA41 uncharacterized protein LOC1114421863.4e-7897.52Show/hide
Query:  MKMVSLSPSSSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFKRNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWGDNSAAGA
        MKMVSLSPSSSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFKRNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWGDNS   A
Subjt:  MKMVSLSPSSSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFKRNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWGDNSAAGA

Query:  ADHLAGYLQWLEDRDKEEKLCRHVNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL
        ADHLAGYLQWLEDRDKEE+LCRHVNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL
Subjt:  ADHLAGYLQWLEDRDKEEKLCRHVNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL

A0A6J1J6X1 uncharacterized protein LOC1114817794.1e-7696.27Show/hide
Query:  MKMVSLSPSSSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFKRNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWGDNSAAGA
        MKMVSLSP SSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFKRNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTW DNS +GA
Subjt:  MKMVSLSPSSSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFKRNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWGDNSAAGA

Query:  ADHLAGYLQWLEDRDKEEKLCRHVNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL
        ADHLAGYLQWLEDRDKEE+LCRH NEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL
Subjt:  ADHLAGYLQWLEDRDKEEKLCRHVNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G42180.1 unknown protein6.0e-1138.04Show/hide
Query:  VSLSPSSSSLQIFPSSSSLKALLQTLI----LSLARAISRAKTTALHILKQANHQSAIAFKRNKNKLLFGSFRLHYNWCSSSNYH---------VAP--P
        + L  SSSS      S++LK L   LI      L R++SRA++  + I            K NK +L    F   Y   SS N H         V P   
Subjt:  VSLSPSSSSLQIFPSSSSLKALLQTLI----LSLARAISRAKTTALHILKQANHQSAIAFKRNKNKLLFGSFRLHYNWCSSSNYH---------VAP--P

Query:  PLTWGDNSAAGAADHL-AGYLQWLEDR--------DKEEKLCRHV--NEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL
        P  +  +      D+L + YLQWLE+R        D +    R V  ++ID+LAD FIARCHEKF LEK ESYR+FQ+M ARSL
Subjt:  PLTWGDNSAAGAADHL-AGYLQWLEDR--------DKEEKLCRHV--NEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL

AT3G57950.1 unknown protein3.4e-2242.16Show/hide
Query:  MKMVSLSPSSSSLQIFPSSSSLKALLQTL----ILSLARAISRAKTTALHILKQANHQS--------AIAFKRNKNKLLFGSFRLHYNWCSSSNYHVAPP
        M++ S SPSSSS     SS  LK L+Q L    +    RA+++AK+  L I K  ++               +N+ K+ FGSFRLHYNWCSS   HV P 
Subjt:  MKMVSLSPSSSSLQIFPSSSSLKALLQTL----ILSLARAISRAKTTALHILKQANHQS--------AIAFKRNKNKLLFGSFRLHYNWCSSSNYHVAPP

Query:  PLTWG-----DNSAAGAADHLAGYLQWLEDR--DKEEKLCRHV-----NEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL
        P  +       N        L+GYL+WLE +  D  E++   V     ++ID LAD+FIA CHEKF LEK ESYR+FQEM  R L
Subjt:  PLTWG-----DNSAAGAADHLAGYLQWLEDR--DKEEKLCRHV-----NEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL

AT5G06790.1 unknown protein7.0e-2040.91Show/hide
Query:  SLSPSSSSLQIFPSSSS--LKALLQTLILS----LARAISRAKTTALHIL--KQANHQSAIAF-------KRNKNKLLFGSFRLHYNWCSSSNYHVAPP-
        S+S S  S    P+SSS  LK+L+QTLI+S    L R ISR  +  + +L  KQ N  S  +        K+ KN +LFGSFRLHYN+CSS    V+ P 
Subjt:  SLSPSSSSLQIFPSSSS--LKALLQTLILS----LARAISRAKTTALHIL--KQANHQSAIAF-------KRNKNKLLFGSFRLHYNWCSSSNYHVAPP-

Query:  -------------PLTWGDNSAAGAAD----------HLAGYLQWLEDRDK---EEKLCRHVNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARS
                       TW    +  + D           L+ YL+ LED+ K   EE+    +NEIDKLAD FIA CHEKF LEK +SYR+ Q    RS
Subjt:  -------------PLTWGDNSAAGAAD----------HLAGYLQWLEDRDK---EEKLCRHVNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATGGTTTCCCTTTCGCCATCTTCTTCTTCACTTCAAATTTTCCCATCATCTTCATCGCTCAAAGCCCTTTTACAGACGCTAATTCTCTCTCTAGCCCGAGCCAT
TTCTCGAGCCAAAACGACCGCGCTTCACATCCTAAAACAGGCCAACCACCAATCCGCCATAGCTTTCAAGAGGAACAAGAACAAGCTCCTCTTCGGCTCCTTCAGACTCC
ATTACAACTGGTGCTCCTCCTCCAATTATCACGTGGCTCCCCCGCCACTCACGTGGGGTGACAACTCCGCCGCCGGCGCCGCCGACCACCTTGCTGGGTACTTGCAGTGG
CTGGAAGACAGAGATAAAGAAGAGAAATTATGTCGGCACGTTAATGAAATTGATAAATTAGCAGATATTTTTATTGCCAGGTGTCATGAGAAATTCAGGCTCGAAAAACA
GGAGTCTTACCGGAAATTTCAAGAGATGGCGGCAAGAAGCCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAATGGTTTCCCTTTCGCCATCTTCTTCTTCACTTCAAATTTTCCCATCATCTTCATCGCTCAAAGCCCTTTTACAGACGCTAATTCTCTCTCTAGCCCGAGCCAT
TTCTCGAGCCAAAACGACCGCGCTTCACATCCTAAAACAGGCCAACCACCAATCCGCCATAGCTTTCAAGAGGAACAAGAACAAGCTCCTCTTCGGCTCCTTCAGACTCC
ATTACAACTGGTGCTCCTCCTCCAATTATCACGTGGCTCCCCCGCCACTCACGTGGGGTGACAACTCCGCCGCCGGCGCCGCCGACCACCTTGCTGGGTACTTGCAGTGG
CTGGAAGACAGAGATAAAGAAGAGAAATTATGTCGGCACGTTAATGAAATTGATAAATTAGCAGATATTTTTATTGCCAGGTGTCATGAGAAATTCAGGCTCGAAAAACA
GGAGTCTTACCGGAAATTTCAAGAGATGGCGGCAAGAAGCCTATGA
Protein sequenceShow/hide protein sequence
MKMVSLSPSSSSLQIFPSSSSLKALLQTLILSLARAISRAKTTALHILKQANHQSAIAFKRNKNKLLFGSFRLHYNWCSSSNYHVAPPPLTWGDNSAAGAADHLAGYLQW
LEDRDKEEKLCRHVNEIDKLADIFIARCHEKFRLEKQESYRKFQEMAARSL