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Carg03570 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg03570
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr14:1925942..1926685
RNA-Seq ExpressionCarg03570
SyntenyCarg03570
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580806.1 putative protein phosphatase 2C 43, partial [Cucurbita argyrosperma subsp. sororia]7.4e-6099.18Show/hide
Query:  MDSSSLGVNGSVQHVPRKSSDQLLKKFAEVGSESGGGRRLSTVVKRRRRRPNEECESPSGGGVVERKWLIPPAGRKSVVLKKIGIGSGSGRSQQLRIRDF
        MDSSSLGVNGSVQHVPRKSSDQLLKKFAEVGSESGGGRRLSTV+KRRRRRPNEECESPSGGGVVERKWLIPPAGRKSVVLKKIGIGSGSGRSQQLRIRDF
Subjt:  MDSSSLGVNGSVQHVPRKSSDQLLKKFAEVGSESGGGRRLSTVVKRRRRRPNEECESPSGGGVVERKWLIPPAGRKSVVLKKIGIGSGSGRSQQLRIRDF

Query:  RNKSFLGAIQKTWRRTVEGASK
        RNKSFLGAIQKTWRRTVEGASK
Subjt:  RNKSFLGAIQKTWRRTVEGASK

XP_008443054.1 PREDICTED: uncharacterized protein LOC103486764 [Cucumis melo]1.1e-5585.82Show/hide
Query:  MDSSSLGVNGSVQHVPRKSSDQLLKKFAEVGSESGGGRRLSTVVKRRRRR-PNEECESPSGGGVVERKWLIPPAGRKSVVLKKIGIGSGSGRSQQLRIRD
        MDSS     G+VQHVPRKSSD+LL+KFAEVGSESGGGRRL TVVKRRR+R  NEEC+SPSGGGVVERKWLI P GRKSVVLKK+GI  G+GRSQQLRIRD
Subjt:  MDSSSLGVNGSVQHVPRKSSDQLLKKFAEVGSESGGGRRLSTVVKRRRRR-PNEECESPSGGGVVERKWLIPPAGRKSVVLKKIGIGSGSGRSQQLRIRD

Query:  FRNKSFLGAIQKTWRRTVEGASKVLLEKHYNTHRRLISDIV
        FRNKS LGAIQKTWRRTVEGASKVLLEKHYNTHRRLISDIV
Subjt:  FRNKSFLGAIQKTWRRTVEGASKVLLEKHYNTHRRLISDIV

XP_022935142.1 uncharacterized protein LOC111442101 [Cucurbita moschata]1.3e-6999.29Show/hide
Query:  MDSSSLGVNGSVQHVPRKSSDQLLKKFAEVGSESGGGRRLSTVVKRRRRRPNEECESPSGGGVVERKWLIPPAGRKSVVLKKIGIGSGSGRSQQLRIRDF
        MDSSSLGVNGSVQHVPRKSSDQLLKKFAEVGSESGGGRRLSTVVKRRRRR NEECESPSGGGVVERKWLIPPAGRKSVVLKKIGIGSGSGRSQQLRIRDF
Subjt:  MDSSSLGVNGSVQHVPRKSSDQLLKKFAEVGSESGGGRRLSTVVKRRRRRPNEECESPSGGGVVERKWLIPPAGRKSVVLKKIGIGSGSGRSQQLRIRDF

Query:  RNKSFLGAIQKTWRRTVEGASKVLLEKHYNTHRRLISDIV
        RNKSFLGAIQKTWRRTVEGASKVLLEKHYNTHRRLISDIV
Subjt:  RNKSFLGAIQKTWRRTVEGASKVLLEKHYNTHRRLISDIV

XP_022983155.1 uncharacterized protein LOC111481793 [Cucurbita maxima]1.6e-70100Show/hide
Query:  MDSSSLGVNGSVQHVPRKSSDQLLKKFAEVGSESGGGRRLSTVVKRRRRRPNEECESPSGGGVVERKWLIPPAGRKSVVLKKIGIGSGSGRSQQLRIRDF
        MDSSSLGVNGSVQHVPRKSSDQLLKKFAEVGSESGGGRRLSTVVKRRRRRPNEECESPSGGGVVERKWLIPPAGRKSVVLKKIGIGSGSGRSQQLRIRDF
Subjt:  MDSSSLGVNGSVQHVPRKSSDQLLKKFAEVGSESGGGRRLSTVVKRRRRRPNEECESPSGGGVVERKWLIPPAGRKSVVLKKIGIGSGSGRSQQLRIRDF

Query:  RNKSFLGAIQKTWRRTVEGASKVLLEKHYNTHRRLISDIV
        RNKSFLGAIQKTWRRTVEGASKVLLEKHYNTHRRLISDIV
Subjt:  RNKSFLGAIQKTWRRTVEGASKVLLEKHYNTHRRLISDIV

XP_023526943.1 uncharacterized protein LOC111790316 [Cucurbita pepo subsp. pepo]4.6e-7099.29Show/hide
Query:  MDSSSLGVNGSVQHVPRKSSDQLLKKFAEVGSESGGGRRLSTVVKRRRRRPNEECESPSGGGVVERKWLIPPAGRKSVVLKKIGIGSGSGRSQQLRIRDF
        MDSSSLGVNGSVQHVPRKSSDQLLKKFAEVGSESGGGRRLSTVVKRRRRRPNEECESPSGGGVVERKWLIPPAGRKSVVLKKIGIGSGSGRSQQLRIRDF
Subjt:  MDSSSLGVNGSVQHVPRKSSDQLLKKFAEVGSESGGGRRLSTVVKRRRRRPNEECESPSGGGVVERKWLIPPAGRKSVVLKKIGIGSGSGRSQQLRIRDF

Query:  RNKSFLGAIQKTWRRTVEGASKVLLEKHYNTHRRLISDIV
        RNKSFLGAIQKTWRRTVEGASKV LEKHYNTHRRLISDIV
Subjt:  RNKSFLGAIQKTWRRTVEGASKVLLEKHYNTHRRLISDIV

TrEMBL top hitse value%identityAlignment
A0A0A0LGY2 Uncharacterized protein6.5e-5483.92Show/hide
Query:  MDSSSLGVNGSVQHVPRKSSDQLLKKFAEVGSESGGGRRLSTVVKRRRRRPNEE--CESPSG-GGVVERKWLIPPAGRKSVVLKKIGIGSGSGRSQQLRI
        MDSS     G+VQHVPRKSSD+LL+KFAEVGSESGGGRRL TVVKRRR+R N E  C+SPSG GGVVERKWLI P GRKSVVLKK+GI  G+GRSQQLRI
Subjt:  MDSSSLGVNGSVQHVPRKSSDQLLKKFAEVGSESGGGRRLSTVVKRRRRRPNEE--CESPSG-GGVVERKWLIPPAGRKSVVLKKIGIGSGSGRSQQLRI

Query:  RDFRNKSFLGAIQKTWRRTVEGASKVLLEKHYNTHRRLISDIV
        RDFRNKS LGAIQKTWRRTVEGASKVLLEKHYNTHRRLISDIV
Subjt:  RDFRNKSFLGAIQKTWRRTVEGASKVLLEKHYNTHRRLISDIV

A0A1S3B7W3 uncharacterized protein LOC1034867645.4e-5685.82Show/hide
Query:  MDSSSLGVNGSVQHVPRKSSDQLLKKFAEVGSESGGGRRLSTVVKRRRRR-PNEECESPSGGGVVERKWLIPPAGRKSVVLKKIGIGSGSGRSQQLRIRD
        MDSS     G+VQHVPRKSSD+LL+KFAEVGSESGGGRRL TVVKRRR+R  NEEC+SPSGGGVVERKWLI P GRKSVVLKK+GI  G+GRSQQLRIRD
Subjt:  MDSSSLGVNGSVQHVPRKSSDQLLKKFAEVGSESGGGRRLSTVVKRRRRR-PNEECESPSGGGVVERKWLIPPAGRKSVVLKKIGIGSGSGRSQQLRIRD

Query:  FRNKSFLGAIQKTWRRTVEGASKVLLEKHYNTHRRLISDIV
        FRNKS LGAIQKTWRRTVEGASKVLLEKHYNTHRRLISDIV
Subjt:  FRNKSFLGAIQKTWRRTVEGASKVLLEKHYNTHRRLISDIV

A0A5A7TJU8 Uncharacterized protein5.4e-5685.82Show/hide
Query:  MDSSSLGVNGSVQHVPRKSSDQLLKKFAEVGSESGGGRRLSTVVKRRRRR-PNEECESPSGGGVVERKWLIPPAGRKSVVLKKIGIGSGSGRSQQLRIRD
        MDSS     G+VQHVPRKSSD+LL+KFAEVGSESGGGRRL TVVKRRR+R  NEEC+SPSGGGVVERKWLI P GRKSVVLKK+GI  G+GRSQQLRIRD
Subjt:  MDSSSLGVNGSVQHVPRKSSDQLLKKFAEVGSESGGGRRLSTVVKRRRRR-PNEECESPSGGGVVERKWLIPPAGRKSVVLKKIGIGSGSGRSQQLRIRD

Query:  FRNKSFLGAIQKTWRRTVEGASKVLLEKHYNTHRRLISDIV
        FRNKS LGAIQKTWRRTVEGASKVLLEKHYNTHRRLISDIV
Subjt:  FRNKSFLGAIQKTWRRTVEGASKVLLEKHYNTHRRLISDIV

A0A6J1F4R1 uncharacterized protein LOC1114421016.5e-7099.29Show/hide
Query:  MDSSSLGVNGSVQHVPRKSSDQLLKKFAEVGSESGGGRRLSTVVKRRRRRPNEECESPSGGGVVERKWLIPPAGRKSVVLKKIGIGSGSGRSQQLRIRDF
        MDSSSLGVNGSVQHVPRKSSDQLLKKFAEVGSESGGGRRLSTVVKRRRRR NEECESPSGGGVVERKWLIPPAGRKSVVLKKIGIGSGSGRSQQLRIRDF
Subjt:  MDSSSLGVNGSVQHVPRKSSDQLLKKFAEVGSESGGGRRLSTVVKRRRRRPNEECESPSGGGVVERKWLIPPAGRKSVVLKKIGIGSGSGRSQQLRIRDF

Query:  RNKSFLGAIQKTWRRTVEGASKVLLEKHYNTHRRLISDIV
        RNKSFLGAIQKTWRRTVEGASKVLLEKHYNTHRRLISDIV
Subjt:  RNKSFLGAIQKTWRRTVEGASKVLLEKHYNTHRRLISDIV

A0A6J1J4Z4 uncharacterized protein LOC1114817937.7e-71100Show/hide
Query:  MDSSSLGVNGSVQHVPRKSSDQLLKKFAEVGSESGGGRRLSTVVKRRRRRPNEECESPSGGGVVERKWLIPPAGRKSVVLKKIGIGSGSGRSQQLRIRDF
        MDSSSLGVNGSVQHVPRKSSDQLLKKFAEVGSESGGGRRLSTVVKRRRRRPNEECESPSGGGVVERKWLIPPAGRKSVVLKKIGIGSGSGRSQQLRIRDF
Subjt:  MDSSSLGVNGSVQHVPRKSSDQLLKKFAEVGSESGGGRRLSTVVKRRRRRPNEECESPSGGGVVERKWLIPPAGRKSVVLKKIGIGSGSGRSQQLRIRDF

Query:  RNKSFLGAIQKTWRRTVEGASKVLLEKHYNTHRRLISDIV
        RNKSFLGAIQKTWRRTVEGASKVLLEKHYNTHRRLISDIV
Subjt:  RNKSFLGAIQKTWRRTVEGASKVLLEKHYNTHRRLISDIV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G42110.1 unknown protein2.0e-1840.6Show/hide
Query:  VQHVPRKSSDQLLKKFA---EVGSESGGGRRLSTVVKRRRRRPNEECESPSGGGVVERKWLIPPAG-RKSVVLKKIGIGSGSGRSQQLRIRDFRNKSFLG
        + HV +KSSD+LL+KFA   +V   S   +R     K   R    + ES + G V  ++ L+ PA  R+S+ ++++     SG+S        RNKS + 
Subjt:  VQHVPRKSSDQLLKKFA---EVGSESGGGRRLSTVVKRRRRRPNEECESPSGGGVVERKWLIPPAG-RKSVVLKKIGIGSGSGRSQQLRIRDFRNKSFLG

Query:  AIQKTWRRTVEGASKVLLEKHYNTHRRLISDIV
         I KTWR+T+EGAS+V +EKHYN HRRL +D+V
Subjt:  AIQKTWRRTVEGASKVLLEKHYNTHRRLISDIV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCTTCTTCACTTGGCGTTAATGGCAGTGTTCAGCATGTTCCCAGAAAGTCCTCCGACCAGCTTTTGAAGAAGTTTGCAGAGGTGGGCTCGGAGTCCGGCGGCGG
AAGGAGGCTGTCGACAGTGGTTAAGAGGCGACGGAGGAGGCCGAATGAGGAGTGCGAGAGCCCATCCGGCGGCGGTGTGGTGGAGCGGAAGTGGCTGATTCCGCCGGCGG
GGAGGAAATCGGTTGTGCTGAAGAAAATCGGGATTGGAAGTGGCAGTGGAAGGTCTCAGCAGCTGAGGATTAGAGATTTTAGAAACAAATCTTTCCTTGGAGCCATTCAA
AAGACGTGGCGAAGAACAGTGGAAGGGGCATCAAAGGTGTTATTAGAGAAACATTACAACACTCACAGACGTTTGATAAGTGACATTGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTCTTCTTCACTTGGCGTTAATGGCAGTGTTCAGCATGTTCCCAGAAAGTCCTCCGACCAGCTTTTGAAGAAGTTTGCAGAGGTGGGCTCGGAGTCCGGCGGCGG
AAGGAGGCTGTCGACAGTGGTTAAGAGGCGACGGAGGAGGCCGAATGAGGAGTGCGAGAGCCCATCCGGCGGCGGTGTGGTGGAGCGGAAGTGGCTGATTCCGCCGGCGG
GGAGGAAATCGGTTGTGCTGAAGAAAATCGGGATTGGAAGTGGCAGTGGAAGGTCTCAGCAGCTGAGGATTAGAGATTTTAGAAACAAATCTTTCCTTGGAGCCATTCAA
AAGACGTGGCGAAGAACAGTGGAAGGGGCATCAAAGGTGTTATTAGAGAAACATTACAACACTCACAGACGTTTGATAAGTGACATTGTCTGA
Protein sequenceShow/hide protein sequence
MDSSSLGVNGSVQHVPRKSSDQLLKKFAEVGSESGGGRRLSTVVKRRRRRPNEECESPSGGGVVERKWLIPPAGRKSVVLKKIGIGSGSGRSQQLRIRDFRNKSFLGAIQ
KTWRRTVEGASKVLLEKHYNTHRRLISDIV