; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg03614 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg03614
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionML domain-containing protein
Genome locationCarg_Chr14:1658265..1659192
RNA-Seq ExpressionCarg03614
SyntenyCarg03614
Gene Ontology termsGO:0015918 - sterol transport (biological process)
GO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domainsIPR003172 - MD-2-related lipid-recognition domain
IPR014756 - Immunoglobulin E-set
IPR039670 - Sterol transport protein NPC2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580760.1 putative phosphatidylglycerol/phosphatidylinositol transfer protein, partial [Cucurbita argyrosperma subsp. sororia]4.1e-4497.8Show/hide
Query:  ETAKYDITVKGVQISPSPIVRGRPINMTFNLIIGKPILAGKMVVDISYFGWHMYRDSHDICVETSCPYSFGDFALAPLQTPLAFFLPVSYY
        ETAKYDITVKGVQISPSPIVRGRPINMTFNLIIGKPILAGKMVVDISYFGWHMYRDSHDICVETSCPYSFGDFALAPLQTPLAFFLP SY+
Subjt:  ETAKYDITVKGVQISPSPIVRGRPINMTFNLIIGKPILAGKMVVDISYFGWHMYRDSHDICVETSCPYSFGDFALAPLQTPLAFFLPVSYY

KAG7017513.1 hypothetical protein SDJN02_19378, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-51100Show/hide
Query:  ETAKYDITVKGVQISPSPIVRGRPINMTFNLIIGKPILAGKMVVDISYFGWHMYRDSHDICVETSCPYSFGDFALAPLQTPLAFFLPVSYYSFYVYHLCL
        ETAKYDITVKGVQISPSPIVRGRPINMTFNLIIGKPILAGKMVVDISYFGWHMYRDSHDICVETSCPYSFGDFALAPLQTPLAFFLPVSYYSFYVYHLCL
Subjt:  ETAKYDITVKGVQISPSPIVRGRPINMTFNLIIGKPILAGKMVVDISYFGWHMYRDSHDICVETSCPYSFGDFALAPLQTPLAFFLPVSYYSFYVYHLCL

Query:  Y
        Y
Subjt:  Y

XP_022935467.1 uncharacterized protein LOC111442332 [Cucurbita moschata]2.0e-4396.7Show/hide
Query:  ETAKYDITVKGVQISPSPIVRGRPINMTFNLIIGKPILAGKMVVDISYFGWHMYRDSHDICVETSCPYSFGDFALAPLQTPLAFFLPVSYY
        ETAKYDI VKGVQISPSPIVRGRPINMTFNLIIGKPILAGKMVVDISYFGWHMYRDSHDICVETSCPYSFGDFALAPLQTPLAFFLP SY+
Subjt:  ETAKYDITVKGVQISPSPIVRGRPINMTFNLIIGKPILAGKMVVDISYFGWHMYRDSHDICVETSCPYSFGDFALAPLQTPLAFFLPVSYY

XP_023522645.1 uncharacterized protein LOC111786644 [Cucurbita pepo subsp. pepo]7.7e-4394.51Show/hide
Query:  ETAKYDITVKGVQISPSPIVRGRPINMTFNLIIGKPILAGKMVVDISYFGWHMYRDSHDICVETSCPYSFGDFALAPLQTPLAFFLPVSYY
        ETAKYDI VKGVQISPSPIVRGRPINMTFNLIIGKPI+AGKMVVDI+YFGWHMYRDSHDICVETSCPYSFGDFALAPLQTPLAFFLP SY+
Subjt:  ETAKYDITVKGVQISPSPIVRGRPINMTFNLIIGKPILAGKMVVDISYFGWHMYRDSHDICVETSCPYSFGDFALAPLQTPLAFFLPVSYY

XP_023528903.1 uncharacterized protein LOC111791686 [Cucurbita pepo subsp. pepo]7.7e-4394.51Show/hide
Query:  ETAKYDITVKGVQISPSPIVRGRPINMTFNLIIGKPILAGKMVVDISYFGWHMYRDSHDICVETSCPYSFGDFALAPLQTPLAFFLPVSYY
        ETAKYDI VKGVQISPSPIVRGRPINMTFNLIIGKPI+AGKMVVDI+YFGWHMYRDSHDICVETSCPYSFGDFALAPLQTPLAFFLP SY+
Subjt:  ETAKYDITVKGVQISPSPIVRGRPINMTFNLIIGKPILAGKMVVDISYFGWHMYRDSHDICVETSCPYSFGDFALAPLQTPLAFFLPVSYY

TrEMBL top hitse value%identityAlignment
A0A0A0LBM1 ML domain-containing protein1.1e-3783.52Show/hide
Query:  ETAKYDITVKGVQISPSPIVRGRPINMTFNLIIGKPILAGKMVVDISYFGWHMYRDSHDICVETSCPYSFGDFALAPLQTPLAFFLPVSYY
        ETAKYDITVKGV+ISP+P+VRG P NM FNLIIGKPI+AGKMVVDISYFGWH+Y DSHDICVETSCPY  GDFAL PL+TPLAFFLP SY+
Subjt:  ETAKYDITVKGVQISPSPIVRGRPINMTFNLIIGKPILAGKMVVDISYFGWHMYRDSHDICVETSCPYSFGDFALAPLQTPLAFFLPVSYY

A0A5D3DP69 Putative phosphatidylglycerol/phosphatidylinositol transfer protein1.4e-3783.52Show/hide
Query:  ETAKYDITVKGVQISPSPIVRGRPINMTFNLIIGKPILAGKMVVDISYFGWHMYRDSHDICVETSCPYSFGDFALAPLQTPLAFFLPVSYY
        ETA+YDITVKGV+ISPSPIVRG P NMTFNL+IG PI+AGKMVVDISYFGWH+Y DSHDICVETSCPY  GDFAL PL+TPLAFFLP SY+
Subjt:  ETAKYDITVKGVQISPSPIVRGRPINMTFNLIIGKPILAGKMVVDISYFGWHMYRDSHDICVETSCPYSFGDFALAPLQTPLAFFLPVSYY

A0A6J1DDJ6 uncharacterized protein LOC1110193829.6e-3985.71Show/hide
Query:  ETAKYDITVKGVQISPSPIVRGRPINMTFNLIIGKPILAGKMVVDISYFGWHMYRDSHDICVETSCPYSFGDFALAPLQTPLAFFLPVSYY
        ETA YDI VKGV+ISPSPIVRG P NMTFNLIIGKPI+AGKMVVDISYFGWH+Y DSHDICVETSCPYSFGDFAL PL+TPLAFF P SY+
Subjt:  ETAKYDITVKGVQISPSPIVRGRPINMTFNLIIGKPILAGKMVVDISYFGWHMYRDSHDICVETSCPYSFGDFALAPLQTPLAFFLPVSYY

A0A6J1FAL9 uncharacterized protein LOC1114423329.9e-4496.7Show/hide
Query:  ETAKYDITVKGVQISPSPIVRGRPINMTFNLIIGKPILAGKMVVDISYFGWHMYRDSHDICVETSCPYSFGDFALAPLQTPLAFFLPVSYY
        ETAKYDI VKGVQISPSPIVRGRPINMTFNLIIGKPILAGKMVVDISYFGWHMYRDSHDICVETSCPYSFGDFALAPLQTPLAFFLP SY+
Subjt:  ETAKYDITVKGVQISPSPIVRGRPINMTFNLIIGKPILAGKMVVDISYFGWHMYRDSHDICVETSCPYSFGDFALAPLQTPLAFFLPVSYY

A0A6J1J1A9 uncharacterized protein LOC1114817848.4e-4394.51Show/hide
Query:  ETAKYDITVKGVQISPSPIVRGRPINMTFNLIIGKPILAGKMVVDISYFGWHMYRDSHDICVETSCPYSFGDFALAPLQTPLAFFLPVSYY
        ETAKYDI VKGVQISPSPIVRGRPI MTFNLIIGKPI+AGKMVVDISYFGWHMYRDSHDICVETSCPYSFGDFALAPLQTPLAFFLP SY+
Subjt:  ETAKYDITVKGVQISPSPIVRGRPINMTFNLIIGKPILAGKMVVDISYFGWHMYRDSHDICVETSCPYSFGDFALAPLQTPLAFFLPVSYY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G11780.1 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein9.2e-1842.53Show/hide
Query:  KYDITVKGVQISPSPIVRGRPINMTFNLIIGKPILAGKMVVDISYFGWHMYRDSHDICVETSCPYSFGDFALAPLQTPLAFFLPVSY
        +Y++ V+GV I+P PI RG P     +      I +GK+V+++SYFGWH++ ++HD+C ETSCP + GDF +A  Q    +  P SY
Subjt:  KYDITVKGVQISPSPIVRGRPINMTFNLIIGKPILAGKMVVDISYFGWHMYRDSHDICVETSCPYSFGDFALAPLQTPLAFFLPVSY

AT3G11780.2 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein1.2e-1738.61Show/hide
Query:  KYDITVKGVQISPSPIVRGRPINMTFNLIIGKPILAGKMVVDISYFGWHMYRDSHDICVETSCPYSFGDFALAPLQTPLAFFLP---------VSYYSFY
        +Y++ V+GV I+P PI RG P     +      I +GK+V+++SYFGWH++ ++HD+C ETSCP + GDF +A  Q    +  P         ++YY F+
Subjt:  KYDITVKGVQISPSPIVRGRPINMTFNLIIGKPILAGKMVVDISYFGWHMYRDSHDICVETSCPYSFGDFALAPLQTPLAFFLP---------VSYYSFY

Query:  V
        V
Subjt:  V

AT3G44100.1 MD-2-related lipid recognition domain-containing protein1.2e-0935.71Show/hide
Query:  ITVKGVQISPSPIVRGRPINMTFNLIIGKPILAGKMVVDISYFGWHMYRDSHDICVETSCPYSFGDFALAPLQTPLAFFLPVSY
        + V GV+ISP P+V G           G+ I  GK+V+ + Y G  ++ ++HD+C ET+CP + G F L+  QT  +   P +Y
Subjt:  ITVKGVQISPSPIVRGRPINMTFNLIIGKPILAGKMVVDISYFGWHMYRDSHDICVETSCPYSFGDFALAPLQTPLAFFLPVSY

AT5G06480.1 Immunoglobulin E-set superfamily protein9.8e-2045.56Show/hide
Query:  ETAKYDITVKGVQISPSPIVRGRPINMTFNLIIGKPILAGKMVVDISYFGWHMYRDSHDICVETSCPYSFGDFALAPLQTPLAFFLPVSY
        E A+Y++ VK V ISP+PI  G P   T +   G+ I  GK+V+++SYFGWH++ ++HD+C ETSCP   GDF +A  Q    +  P SY
Subjt:  ETAKYDITVKGVQISPSPIVRGRPINMTFNLIIGKPILAGKMVVDISYFGWHMYRDSHDICVETSCPYSFGDFALAPLQTPLAFFLPVSY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAGACAGCTAAGTATGATATCACGGTGAAAGGAGTTCAGATATCTCCCAGCCCCATAGTTAGGGGTCGCCCAATAAATATGACCTTCAATCTAATTATAGGTAAGCCAAT
CCTTGCAGGAAAAATGGTTGTTGACATTTCATATTTTGGGTGGCACATGTATAGGGACAGCCACGACATTTGTGTTGAGACGTCCTGCCCTTACTCGTTTGGTGATTTTG
CACTCGCTCCATTGCAAACGCCTCTGGCATTCTTTTTACCGGTAAGTTACTACTCATTTTATGTTTACCACTTGTGTTTGTAT
mRNA sequenceShow/hide mRNA sequence
GAGACAGCTAAGTATGATATCACGGTGAAAGGAGTTCAGATATCTCCCAGCCCCATAGTTAGGGGTCGCCCAATAAATATGACCTTCAATCTAATTATAGGTAAGCCAAT
CCTTGCAGGAAAAATGGTTGTTGACATTTCATATTTTGGGTGGCACATGTATAGGGACAGCCACGACATTTGTGTTGAGACGTCCTGCCCTTACTCGTTTGGTGATTTTG
CACTCGCTCCATTGCAAACGCCTCTGGCATTCTTTTTACCGGTAAGTTACTACTCATTTTATGTTTACCACTTGTGTTTGTAT
Protein sequenceShow/hide protein sequence
ETAKYDITVKGVQISPSPIVRGRPINMTFNLIIGKPILAGKMVVDISYFGWHMYRDSHDICVETSCPYSFGDFALAPLQTPLAFFLPVSYYSFYVYHLCLY