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Carg03663 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg03663
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionSRP54 domain-containing protein
Genome locationCarg_Chr14:1392907..1393636
RNA-Seq ExpressionCarg03663
SyntenyCarg03663
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580706.1 hypothetical protein SDJN03_20708, partial [Cucurbita argyrosperma subsp. sororia]3.0e-4299.02Show/hide
Query:  MASSGRDGGVTSAAGSRFPGVDGERELNPSHNKHVDVDPISSEAAASLDIKEQEKRKAAEEERNRAKKMEAKQTLKMPFIVSSVIAAVAVVAFAIVKNLR
        MASSGRDGGVTSAAGSRFPGVDGERELNPSHNKHVDVDPISSEAAASLDIKEQEKRKAAEEERNRAKKMEA QTLKMPFIVSSVIAAVAVVAFAIVKNLR
Subjt:  MASSGRDGGVTSAAGSRFPGVDGERELNPSHNKHVDVDPISSEAAASLDIKEQEKRKAAEEERNRAKKMEAKQTLKMPFIVSSVIAAVAVVAFAIVKNLR

Query:  EN
        EN
Subjt:  EN

KAG7017465.1 hypothetical protein SDJN02_19330 [Cucurbita argyrosperma subsp. argyrosperma]6.0e-43100Show/hide
Query:  MASSGRDGGVTSAAGSRFPGVDGERELNPSHNKHVDVDPISSEAAASLDIKEQEKRKAAEEERNRAKKMEAKQTLKMPFIVSSVIAAVAVVAFAIVKNLR
        MASSGRDGGVTSAAGSRFPGVDGERELNPSHNKHVDVDPISSEAAASLDIKEQEKRKAAEEERNRAKKMEAKQTLKMPFIVSSVIAAVAVVAFAIVKNLR
Subjt:  MASSGRDGGVTSAAGSRFPGVDGERELNPSHNKHVDVDPISSEAAASLDIKEQEKRKAAEEERNRAKKMEAKQTLKMPFIVSSVIAAVAVVAFAIVKNLR

Query:  EN
        EN
Subjt:  EN

XP_022935404.1 uncharacterized protein LOC111442294 [Cucurbita moschata]1.4e-3692.16Show/hide
Query:  MASSGRDGGVTSAAGSRFPGVDGERELNPSHNKHVDVDPISSEAAASLDIKEQEKRKAAEEERNRAKKMEAKQTLKMPFIVSSVIAAVAVVAFAIVKNLR
        MASSGRDGGVT+AAGSRFP  DGERELNP  NKHVDVDPISSEAAASL IKEQEKRKAAEEERNR KKMEA QTLKMPFIVSSVIAAVAVVAFAIVKNLR
Subjt:  MASSGRDGGVTSAAGSRFPGVDGERELNPSHNKHVDVDPISSEAAASLDIKEQEKRKAAEEERNRAKKMEAKQTLKMPFIVSSVIAAVAVVAFAIVKNLR

Query:  EN
        EN
Subjt:  EN

XP_022983165.1 uncharacterized protein LOC111481798 [Cucurbita maxima]2.9e-3792.16Show/hide
Query:  MASSGRDGGVTSAAGSRFPGVDGERELNPSHNKHVDVDPISSEAAASLDIKEQEKRKAAEEERNRAKKMEAKQTLKMPFIVSSVIAAVAVVAFAIVKNLR
        MASS RDGGVT+AAGSRFPGVDGERELNP HNK VDVDPISSEAAASL IKEQEKRKAAEEERNRAKK EA QTLKMPFIVSSVIAAVAVVAFAIVK LR
Subjt:  MASSGRDGGVTSAAGSRFPGVDGERELNPSHNKHVDVDPISSEAAASLDIKEQEKRKAAEEERNRAKKMEAKQTLKMPFIVSSVIAAVAVVAFAIVKNLR

Query:  EN
        EN
Subjt:  EN

XP_023528882.1 uncharacterized protein LOC111791675 [Cucurbita pepo subsp. pepo]2.9e-3793.14Show/hide
Query:  MASSGRDGGVTSAAGSRFPGVDGERELNPSHNKHVDVDPISSEAAASLDIKEQEKRKAAEEERNRAKKMEAKQTLKMPFIVSSVIAAVAVVAFAIVKNLR
        MASSGRDGGVT+AAGSRFP  DGERELNP HNKHVDVDPISSEAAASL IKEQEKRKAAEEERNRAKK EA QTLKMPFIVSSVIAAVAVVAFAIVKNLR
Subjt:  MASSGRDGGVTSAAGSRFPGVDGERELNPSHNKHVDVDPISSEAAASLDIKEQEKRKAAEEERNRAKKMEAKQTLKMPFIVSSVIAAVAVVAFAIVKNLR

Query:  EN
        EN
Subjt:  EN

TrEMBL top hitse value%identityAlignment
A0A6J1CUK2 uncharacterized protein LOC1110143621.6e-2569.61Show/hide
Query:  MASSGRDGGVTSAAGSRFPGVDGERELNPSHNKHVDVDPISSEAAASLDIKEQEKRKAAEEERNRAKKMEAKQTLKMPFIVSSVIAAVAVVAFAIVKNLR
        MAS G DGGV+ AAGS FP  D +RELNP HN+HV+VDP+SSE A SL+ KEQ KRKA EEER  AKK +  +TLK  FIVS VIAAVAV AFAIVK LR
Subjt:  MASSGRDGGVTSAAGSRFPGVDGERELNPSHNKHVDVDPISSEAAASLDIKEQEKRKAAEEERNRAKKMEAKQTLKMPFIVSSVIAAVAVVAFAIVKNLR

Query:  EN
        EN
Subjt:  EN

A0A6J1F5B5 uncharacterized protein LOC1114422946.9e-3792.16Show/hide
Query:  MASSGRDGGVTSAAGSRFPGVDGERELNPSHNKHVDVDPISSEAAASLDIKEQEKRKAAEEERNRAKKMEAKQTLKMPFIVSSVIAAVAVVAFAIVKNLR
        MASSGRDGGVT+AAGSRFP  DGERELNP  NKHVDVDPISSEAAASL IKEQEKRKAAEEERNR KKMEA QTLKMPFIVSSVIAAVAVVAFAIVKNLR
Subjt:  MASSGRDGGVTSAAGSRFPGVDGERELNPSHNKHVDVDPISSEAAASLDIKEQEKRKAAEEERNRAKKMEAKQTLKMPFIVSSVIAAVAVVAFAIVKNLR

Query:  EN
        EN
Subjt:  EN

A0A6J1G5S8 uncharacterized protein LOC1114510473.0e-2466.99Show/hide
Query:  MASSGRDGGVTSAAGSRFPGVDGERELNPSHNKHVDVDPISSEAAASLDIKEQEKRKA-AEEERNRAKKMEAKQTLKMPFIVSSVIAAVAVVAFAIVKNL
        MAS GRDGG T  AGSRFP VD +REL+P HN+HV VDPISS+ AAS++ KEQ KRKA  EEER +AKK +  QTLK  FIVS V+AAVAV AF +VK L
Subjt:  MASSGRDGGVTSAAGSRFPGVDGERELNPSHNKHVDVDPISSEAAASLDIKEQEKRKA-AEEERNRAKKMEAKQTLKMPFIVSSVIAAVAVVAFAIVKNL

Query:  REN
        R+N
Subjt:  REN

A0A6J1J505 uncharacterized protein LOC1114817981.4e-3792.16Show/hide
Query:  MASSGRDGGVTSAAGSRFPGVDGERELNPSHNKHVDVDPISSEAAASLDIKEQEKRKAAEEERNRAKKMEAKQTLKMPFIVSSVIAAVAVVAFAIVKNLR
        MASS RDGGVT+AAGSRFPGVDGERELNP HNK VDVDPISSEAAASL IKEQEKRKAAEEERNRAKK EA QTLKMPFIVSSVIAAVAVVAFAIVK LR
Subjt:  MASSGRDGGVTSAAGSRFPGVDGERELNPSHNKHVDVDPISSEAAASLDIKEQEKRKAAEEERNRAKKMEAKQTLKMPFIVSSVIAAVAVVAFAIVKNLR

Query:  EN
        EN
Subjt:  EN

A0A6J1KYC8 uncharacterized protein LOC1114986802.3e-2467.96Show/hide
Query:  MASSGRDGGVTSAAGSRFPGVDGERELNPSHNKHVDVDPISSEAAASLDIKEQEKRKA-AEEERNRAKKMEAKQTLKMPFIVSSVIAAVAVVAFAIVKNL
        MAS GRDGG T  AGSRFP VD +REL+P HN+HV VDPISS+ AAS++ KEQ KRKA  EEER +AKK +  QTLK  FIVS VIAAVAV AF +VK L
Subjt:  MASSGRDGGVTSAAGSRFPGVDGERELNPSHNKHVDVDPISSEAAASLDIKEQEKRKA-AEEERNRAKKMEAKQTLKMPFIVSSVIAAVAVVAFAIVKNL

Query:  REN
        R+N
Subjt:  REN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52620.1 unknown protein2.4e-1047.06Show/hide
Query:  FPGVDGERELNPSHNKHVDVDPISSEAAASLDIKEQEKRKAAEEERNRAKKMEAKQTLKMPFIVSSVIAAVAVVAFAIVKNLREN
        FP  D E ELNP  NK+ +VDP+SSE A+      ++ +K  E+  N   K +  +TLK   IVS+VI AVA  AFAI K L+EN
Subjt:  FPGVDGERELNPSHNKHVDVDPISSEAAASLDIKEQEKRKAAEEERNRAKKMEAKQTLKMPFIVSSVIAAVAVVAFAIVKNLREN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGCTCAGGCAGAGATGGCGGAGTAACCAGTGCAGCAGGTTCCCGGTTTCCGGGCGTGGACGGTGAGAGAGAGTTAAATCCCAGCCATAACAAGCACGTTGACGT
GGATCCCATTTCCTCGGAAGCTGCTGCATCTTTGGATATTAAGGAGCAGGAGAAGAGAAAAGCAGCGGAAGAAGAACGAAACCGGGCGAAGAAGATGGAAGCGAAGCAGA
CATTGAAGATGCCGTTCATCGTCTCCAGCGTCATTGCCGCCGTAGCGGTGGTCGCCTTCGCCATTGTTAAGAACTTACGAGAAAACTAA
mRNA sequenceShow/hide mRNA sequence
TTTGATTTTTTTTAGTGAGAAAAAAAGAAAAATATATATATGGCGAGCTCAGGCAGAGATGGCGGAGTAACCAGTGCAGCAGGTTCCCGGTTTCCGGGCGTGGACGGTGA
GAGAGAGTTAAATCCCAGCCATAACAAGCACGTTGACGTGGATCCCATTTCCTCGGAAGCTGCTGCATCTTTGGATATTAAGGAGCAGGAGAAGAGAAAAGCAGCGGAAG
AAGAACGAAACCGGGCGAAGAAGATGGAAGCGAAGCAGACATTGAAGATGCCGTTCATCGTCTCCAGCGTCATTGCCGCCGTAGCGGTGGTCGCCTTCGCCATTGTTAAG
AACTTACGAGAAAACTAATTCTCTTCCCTCTCAACTATGCTCCTCCCTCCCTCTTCTCCAGTCTTTTTTATTTTTTTATTTTGTCTTTTTTTA
Protein sequenceShow/hide protein sequence
MASSGRDGGVTSAAGSRFPGVDGERELNPSHNKHVDVDPISSEAAASLDIKEQEKRKAAEEERNRAKKMEAKQTLKMPFIVSSVIAAVAVVAFAIVKNLREN