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Carg03672 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg03672
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptioncytochrome b-c1 complex subunit 9-like
Genome locationCarg_Chr14:1353000..1355499
RNA-Seq ExpressionCarg03672
SyntenyCarg03672
Gene Ontology termsGO:0006122 - mitochondrial electron transport, ubiquinol to cytochrome c (biological process)
GO:0005750 - mitochondrial respiratory chain complex III (cellular component)
InterPro domainsIPR008027 - Cytochrome b-c1 complex subunit 9
IPR036656 - Cytochrome b-c1 complex subunit 9 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580699.1 Glucosamine 6-phosphate N-acetyltransferase, partial [Cucurbita argyrosperma subsp. sororia]2.3e-64100Show/hide
Query:  MLAISIKPERFIQIVKGYCSRVESVRIGSKRSRVATNQTTPFPSSSLNQRRGKFLLTLTHRSEGKELARTSTMNSAGRRSGGGLFEGLYRVIMRRNSVYV
        MLAISIKPERFIQIVKGYCSRVESVRIGSKRSRVATNQTTPFPSSSLNQRRGKFLLTLTHRSEGKELARTSTMNSAGRRSGGGLFEGLYRVIMRRNSVYV
Subjt:  MLAISIKPERFIQIVKGYCSRVESVRIGSKRSRVATNQTTPFPSSSLNQRRGKFLLTLTHRSEGKELARTSTMNSAGRRSGGGLFEGLYRVIMRRNSVYV

Query:  TFIIAGAFLGERAVDYGVHKLWEYNNVGKR
        TFIIAGAFLGERAVDYGVHKLWEYNNVGKR
Subjt:  TFIIAGAFLGERAVDYGVHKLWEYNNVGKR

KAG6596568.1 Cytochrome b-c1 complex subunit 9, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]2.2e-3568.09Show/hide
Query:  SIKPERFIQIVKGYCSRVESVRIGSKRSRVATNQTTPFPSS-SLNQRRGKFLLTLTHRSEGKELARTSTMNSAGRRSGGGLFEGLYRVIMRRNSVYVTFI
        S KP+RF +   GY SR  +  I  K   V   +     S  S  + R  F L    RSEGKELARTSTMNSA  RS GGLFEGLYRVIMRRNSVYVTFI
Subjt:  SIKPERFIQIVKGYCSRVESVRIGSKRSRVATNQTTPFPSS-SLNQRRGKFLLTLTHRSEGKELARTSTMNSAGRRSGGGLFEGLYRVIMRRNSVYVTFI

Query:  IAGAFLGERAVDYGVHKLWEYNNVGKRYEDISVLGQRPSEE
        IAGAF+GERAVDYGVHKLWEYNNVGKRYEDISVLGQRP+EE
Subjt:  IAGAFLGERAVDYGVHKLWEYNNVGKRYEDISVLGQRPSEE

KAG7017456.1 hypothetical protein SDJN02_19321, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-72100Show/hide
Query:  MLAISIKPERFIQIVKGYCSRVESVRIGSKRSRVATNQTTPFPSSSLNQRRGKFLLTLTHRSEGKELARTSTMNSAGRRSGGGLFEGLYRVIMRRNSVYV
        MLAISIKPERFIQIVKGYCSRVESVRIGSKRSRVATNQTTPFPSSSLNQRRGKFLLTLTHRSEGKELARTSTMNSAGRRSGGGLFEGLYRVIMRRNSVYV
Subjt:  MLAISIKPERFIQIVKGYCSRVESVRIGSKRSRVATNQTTPFPSSSLNQRRGKFLLTLTHRSEGKELARTSTMNSAGRRSGGGLFEGLYRVIMRRNSVYV

Query:  TFIIAGAFLGERAVDYGVHKLWEYNNVGKRYEDISVLGQRPSEE
        TFIIAGAFLGERAVDYGVHKLWEYNNVGKRYEDISVLGQRPSEE
Subjt:  TFIIAGAFLGERAVDYGVHKLWEYNNVGKRYEDISVLGQRPSEE

PQQ06111.1 cytochrome b-c1 complex subunit 9 [Prunus yedoensis var. nudiflora]2.0e-3197.22Show/hide
Query:  MNSAGRRSGGGLFEGLYRVIMRRNSVYVTFIIAGAFLGERAVDYGVHKLWEYNNVGKRYEDISVLGQRPSEE
        MNSA RRSGGGLFEGLYRVIMRRNSVYVTF+IAGAFLGERAVDYGVHKLWEYNNVGKRYEDISVLGQRPSEE
Subjt:  MNSAGRRSGGGLFEGLYRVIMRRNSVYVTFIIAGAFLGERAVDYGVHKLWEYNNVGKRYEDISVLGQRPSEE

XP_022934205.1 cytochrome b-c1 complex subunit 9-like [Cucurbita moschata]3.0e-32100Show/hide
Query:  MNSAGRRSGGGLFEGLYRVIMRRNSVYVTFIIAGAFLGERAVDYGVHKLWEYNNVGKRYEDISVLGQRPSEE
        MNSAGRRSGGGLFEGLYRVIMRRNSVYVTFIIAGAFLGERAVDYGVHKLWEYNNVGKRYEDISVLGQRPSEE
Subjt:  MNSAGRRSGGGLFEGLYRVIMRRNSVYVTFIIAGAFLGERAVDYGVHKLWEYNNVGKRYEDISVLGQRPSEE

TrEMBL top hitse value%identityAlignment
A0A314YLX6 Cytochrome b-c1 complex subunit 99.5e-3297.22Show/hide
Query:  MNSAGRRSGGGLFEGLYRVIMRRNSVYVTFIIAGAFLGERAVDYGVHKLWEYNNVGKRYEDISVLGQRPSEE
        MNSA RRSGGGLFEGLYRVIMRRNSVYVTF+IAGAFLGERAVDYGVHKLWEYNNVGKRYEDISVLGQRPSEE
Subjt:  MNSAGRRSGGGLFEGLYRVIMRRNSVYVTFIIAGAFLGERAVDYGVHKLWEYNNVGKRYEDISVLGQRPSEE

A0A5E4F1C6 PREDICTED: cytochrome b-c1 complex subunit 91.6e-3195.83Show/hide
Query:  MNSAGRRSGGGLFEGLYRVIMRRNSVYVTFIIAGAFLGERAVDYGVHKLWEYNNVGKRYEDISVLGQRPSEE
        MNSA RRSGGGLFEG+YRVIMRRNSVYVTF+IAGAFLGERAVDYGVHKLWEYNNVGKRYEDISVLGQRPSEE
Subjt:  MNSAGRRSGGGLFEGLYRVIMRRNSVYVTFIIAGAFLGERAVDYGVHKLWEYNNVGKRYEDISVLGQRPSEE

A0A6J1F714 cytochrome b-c1 complex subunit 9-like1.5e-32100Show/hide
Query:  MNSAGRRSGGGLFEGLYRVIMRRNSVYVTFIIAGAFLGERAVDYGVHKLWEYNNVGKRYEDISVLGQRPSEE
        MNSAGRRSGGGLFEGLYRVIMRRNSVYVTFIIAGAFLGERAVDYGVHKLWEYNNVGKRYEDISVLGQRPSEE
Subjt:  MNSAGRRSGGGLFEGLYRVIMRRNSVYVTFIIAGAFLGERAVDYGVHKLWEYNNVGKRYEDISVLGQRPSEE

A0A6J1J703 cytochrome b-c1 complex subunit 9-like1.5e-32100Show/hide
Query:  MNSAGRRSGGGLFEGLYRVIMRRNSVYVTFIIAGAFLGERAVDYGVHKLWEYNNVGKRYEDISVLGQRPSEE
        MNSAGRRSGGGLFEGLYRVIMRRNSVYVTFIIAGAFLGERAVDYGVHKLWEYNNVGKRYEDISVLGQRPSEE
Subjt:  MNSAGRRSGGGLFEGLYRVIMRRNSVYVTFIIAGAFLGERAVDYGVHKLWEYNNVGKRYEDISVLGQRPSEE

M5WB59 Uncharacterized protein1.6e-3195.83Show/hide
Query:  MNSAGRRSGGGLFEGLYRVIMRRNSVYVTFIIAGAFLGERAVDYGVHKLWEYNNVGKRYEDISVLGQRPSEE
        MNSA RRSGGGLFEG+YRVIMRRNSVYVTF+IAGAFLGERAVDYGVHKLWEYNNVGKRYEDISVLGQRPSEE
Subjt:  MNSAGRRSGGGLFEGLYRVIMRRNSVYVTFIIAGAFLGERAVDYGVHKLWEYNNVGKRYEDISVLGQRPSEE

SwissProt top hitse value%identityAlignment
P46270 Cytochrome b-c1 complex subunit 97.5e-2677.78Show/hide
Query:  MNSAGRRSGGGLFEGLYRVIMRRNSVYVTFIIAGAFLGERAVDYGVHKLWEYNNVGKRYEDISVLGQRPSEE
        M SA RRSGGG+ EG YR++MRR  VYVTF+IAGA LGERAVDYGV  LWE NNVGKRYEDISVLGQRP +E
Subjt:  MNSAGRRSGGGLFEGLYRVIMRRNSVYVTFIIAGAFLGERAVDYGVHKLWEYNNVGKRYEDISVLGQRPSEE

Q7SGT7 Cytochrome b-c1 complex subunit 9, mitochondrial4.7e-0442.55Show/hide
Query:  LYRVIMRRNSVYVTFIIAGAFLGERAVDYGVHKLWEYNNVGKRYEDI
        LY +I R N+ +V  + AGAF  E A D G+ K+W+  N G++++DI
Subjt:  LYRVIMRRNSVYVTFIIAGAFLGERAVDYGVHKLWEYNNVGKRYEDI

Q9LXJ2 Cytochrome b-c1 complex subunit 9, mitochondrial6.8e-2781.94Show/hide
Query:  MNSAGRRSGGGLFEGLYRVIMRRNSVYVTFIIAGAFLGERAVDYGVHKLWEYNNVGKRYEDISVLGQRPSEE
        M  A RR+  G FEG Y++IMRRNSVYVTFIIAGAF GERAVDYGVHKLWE NNVGKRYEDISVLGQRP EE
Subjt:  MNSAGRRSGGGLFEGLYRVIMRRNSVYVTFIIAGAFLGERAVDYGVHKLWEYNNVGKRYEDISVLGQRPSEE

Arabidopsis top hitse value%identityAlignment
AT3G52730.1 ubiquinol-cytochrome C reductase UQCRX/QCR9-like family protein4.8e-2881.94Show/hide
Query:  MNSAGRRSGGGLFEGLYRVIMRRNSVYVTFIIAGAFLGERAVDYGVHKLWEYNNVGKRYEDISVLGQRPSEE
        M  A RR+  G FEG Y++IMRRNSVYVTFIIAGAF GERAVDYGVHKLWE NNVGKRYEDISVLGQRP EE
Subjt:  MNSAGRRSGGGLFEGLYRVIMRRNSVYVTFIIAGAFLGERAVDYGVHKLWEYNNVGKRYEDISVLGQRPSEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCGCTATTTCAATTAAACCGGAGCGGTTCATCCAGATCGTTAAGGGTTATTGCAGCAGAGTCGAGTCGGTTCGAATCGGTTCGAAGCGGTCAAGAGTTGCAACAAA
TCAAACTACTCCATTCCCGTCTTCTTCTCTCAACCAAAGGCGCGGGAAGTTTCTACTAACCCTAACGCATCGATCAGAAGGCAAAGAACTCGCGAGAACATCGACAATGA
ACTCAGCAGGTCGAAGAAGCGGAGGAGGCCTTTTCGAAGGTCTGTACAGAGTGATTATGCGCCGTAATTCTGTTTACGTCACCTTCATCATCGCCGGTGCTTTTCTCGGA
GAGCGGGCTGTGGATTATGGAGTTCACAAGCTCTGGGAGTACAACAATGTTGGGAAGCGGTATGAAGACATTTCAGTTTTGGGGCAAAGACCGTCGGAAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCGCTATTTCAATTAAACCGGAGCGGTTCATCCAGATCGTTAAGGGTTATTGCAGCAGAGTCGAGTCGGTTCGAATCGGTTCGAAGCGGTCAAGAGTTGCAACAAA
TCAAACTACTCCATTCCCGTCTTCTTCTCTCAACCAAAGGCGCGGGAAGTTTCTACTAACCCTAACGCATCGATCAGAAGGCAAAGAACTCGCGAGAACATCGACAATGA
ACTCAGCAGGTCGAAGAAGCGGAGGAGGCCTTTTCGAAGGTCTGTACAGAGTGATTATGCGCCGTAATTCTGTTTACGTCACCTTCATCATCGCCGGTGCTTTTCTCGGA
GAGCGGGCTGTGGATTATGGAGTTCACAAGCTCTGGGAGTACAACAATGTTGGGAAGCGGTATGAAGACATTTCAGTTTTGGGGCAAAGACCGTCGGAAGAATGAACTTG
TCAGCCGCCAATTGAAAGCTTACACAATCATGGACACGAGGTAAAAAGAACTGGTGGCTTAGGATGGTAAATGAGAATGTATTTCCAATGGAAAAAAACGTTCTTTCTTT
TCAGTCTGGAAAGTTTGTGTTTCTTCATGAGATTCTAATCATATTTTATTTGATTAAGTTCGGAGTTCCGAGGTTTCGTATATTACCTTTGATTTTGATCATCGAGAATA
CATGAAAAGCAAATTGTTAAGAGTACTAATTACAAAGTTATTAGGATATGAGCAGTGGCATAATGGTGTTACCCTTAGGTTGTAACTTTTGTACATAGATGGAGTTTAGA
GAACTTGAGACAATTTAAAGAAACTTTGCAAATTAGTCAGTCTATAGGGGATTGGGGGAGGAAGATAGCTCTCTCGAAAAGTTATCGTCTTTGTCGTTTCTCTATAGTTT
CGGTGCTGAAACCGAAGAGGGAGGCTCTCGGAATTTTGCAAGAGAAGTAGAGGGGTTGTTTTGTTAGAGAGAAGAAA
Protein sequenceShow/hide protein sequence
MLAISIKPERFIQIVKGYCSRVESVRIGSKRSRVATNQTTPFPSSSLNQRRGKFLLTLTHRSEGKELARTSTMNSAGRRSGGGLFEGLYRVIMRRNSVYVTFIIAGAFLG
ERAVDYGVHKLWEYNNVGKRYEDISVLGQRPSEE