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Carg03684 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg03684
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein LITTLE ZIPPER 4
Genome locationCarg_Chr14:1308569..1308787
RNA-Seq ExpressionCarg03684
SyntenyCarg03684
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039312 - Protein LITTLE ZIPPER


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_007027705.2 PREDICTED: protein LITTLE ZIPPER 4 isoform X3 [Theobroma cacao]1.7e-2086.49Show/hide
Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGSSKANSSKSIPDLNLSSA---NPSNSS
        MERLNS LYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKG+SK NS+ +IPDLNLSS+   NPSNSS
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGSSKANSSKSIPDLNLSSA---NPSNSS
XP_008442826.1 PREDICTED: protein LITTLE ZIPPER 4 [Cucumis melo]6.8e-2597.22Show/hide
Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGSSKANSSKSIPDLNLSSANPSNSSN
        MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKG+SKAN+SKSIPDLNLSSANPSNSSN
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGSSKANSSKSIPDLNLSSANPSNSSN
XP_017976698.1 PREDICTED: protein LITTLE ZIPPER 4 isoform X1 [Theobroma cacao]1.7e-2086.49Show/hide
Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGSSKANSSKSIPDLNLSSA---NPSNSS
        MERLNS LYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKG+SK NS+ +IPDLNLSS+   NPSNSS
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGSSKANSSKSIPDLNLSSA---NPSNSS
XP_022144704.1 protein LITTLE ZIPPER 4 [Momordica charantia]3.5e-2189.47Show/hide
Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGSSKAN-SSKSIPDLNLSSA---NPSNSSN
        MERLNS+LYLQNCYIMKENERLRKKAQ+LNQENQALLSELKQKLSKGSSK N SSKSIPDLNLSSA   NPSNS+N
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGSSKAN-SSKSIPDLNLSSA---NPSNSSN
XP_022935644.1 protein LITTLE ZIPPER 4 [Cucurbita moschata]1.4e-25100Show/hide
Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGSSKANSSKSIPDLNLSSANPSNSSN
        MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGSSKANSSKSIPDLNLSSANPSNSSN
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGSSKANSSKSIPDLNLSSANPSNSSN
TrEMBL top hitse value%identityAlignment
A0A0A0LE03 Uncharacterized protein3.3e-2597.22Show/hide
Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGSSKANSSKSIPDLNLSSANPSNSSN
        MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKG+SKAN+SKSIPDLNLSSANPSNSSN
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGSSKANSSKSIPDLNLSSANPSNSSN
A0A1S3B7E3 protein LITTLE ZIPPER 43.3e-2597.22Show/hide
Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGSSKANSSKSIPDLNLSSANPSNSSN
        MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKG+SKAN+SKSIPDLNLSSANPSNSSN
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGSSKANSSKSIPDLNLSSANPSNSSN
A0A6J1CT31 protein LITTLE ZIPPER 41.7e-2189.47Show/hide
Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGSSKAN-SSKSIPDLNLSSA---NPSNSSN
        MERLNS+LYLQNCYIMKENERLRKKAQ+LNQENQALLSELKQKLSKGSSK N SSKSIPDLNLSSA   NPSNS+N
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGSSKAN-SSKSIPDLNLSSA---NPSNSSN
A0A6J1F606 protein LITTLE ZIPPER 46.6e-26100Show/hide
Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGSSKANSSKSIPDLNLSSANPSNSSN
        MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGSSKANSSKSIPDLNLSSANPSNSSN
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGSSKANSSKSIPDLNLSSANPSNSSN
A0A6J1J6J7 protein LITTLE ZIPPER 46.6e-26100Show/hide
Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGSSKANSSKSIPDLNLSSANPSNSSN
        MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGSSKANSSKSIPDLNLSSANPSNSSN
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGSSKANSSKSIPDLNLSSANPSNSSN
SwissProt top hitse value%identityAlignment
Q56WL5 Protein LITTLE ZIPPER 49.5e-1467.61Show/hide
Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLS--KGSSKANSSKSIPDLNLSSANPSN
        MERLNS+LYLQNCYI+KENERLRKKAQ+LNQENQ LL ELKQKLS  K SS +N   +  + NLSS++ ++
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLS--KGSSKANSSKSIPDLNLSSANPSN
Q9LXI8 Protein LITTLE ZIPPER 33.1e-1266.67Show/hide
Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGSSKANSSKSIPDLNLSSAN
        MERLNS+L+++NCYIMKENERLRKKA+LLNQENQ LL +LKQKLSK  +  N S +  D   SSA+
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGSSKANSSKSIPDLNLSSAN
Arabidopsis top hitse value%identityAlignment
AT2G45450.1 protein binding1.4e-0453.49Show/hide
Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQK
        ME +N +LY++N  I++ENE+L+KKA LL+QEN+ L S L+ K
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQK
AT3G52770.1 protein binding2.2e-1366.67Show/hide
Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGSSKANSSKSIPDLNLSSAN
        MERLNS+L+++NCYIMKENERLRKKA+LLNQENQ LL +LKQKLSK  +  N S +  D   SSA+
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGSSKANSSKSIPDLNLSSAN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGGCTAAACTCAGAGCTGTACTTGCAGAACTGTTACATAATGAAGGAAAATGAGAGACTGAGGAAGAAAGCTCAACTTTTGAACCAAGAAAATCAAGCACTGCT
TTCGGAACTGAAGCAGAAATTATCTAAAGGAAGTTCAAAGGCCAATTCCTCAAAATCAATCCCTGATCTTAATCTCTCCTCTGCAAATCCTTCAAATTCTTCCAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGGCTAAACTCAGAGCTGTACTTGCAGAACTGTTACATAATGAAGGAAAATGAGAGACTGAGGAAGAAAGCTCAACTTTTGAACCAAGAAAATCAAGCACTGCT
TTCGGAACTGAAGCAGAAATTATCTAAAGGAAGTTCAAAGGCCAATTCCTCAAAATCAATCCCTGATCTTAATCTCTCCTCTGCAAATCCTTCAAATTCTTCCAACTGA
Protein sequenceShow/hide protein sequence
MERLNSELYLQNCYIMKENERLRKKAQLLNQENQALLSELKQKLSKGSSKANSSKSIPDLNLSSANPSNSSN