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Carg03853 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg03853
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr12:1650393..1653076
RNA-Seq ExpressionCarg03853
SyntenyCarg03853
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585398.1 hypothetical protein SDJN03_18131, partial [Cucurbita argyrosperma subsp. sororia]2.8e-0939.39Show/hide
Query:  MQISGIFAASNSVFLVRTLSVRVF--------------------------------------------------------------------------IF
        MQISG+FAASNSVFLVRTLSVRVF                                                                            
Subjt:  MQISGIFAASNSVFLVRTLSVRVF--------------------------------------------------------------------------IF

Query:  VMQQHQSLNISAKGKRTESCTPSWMAVDEEIT
        +++QHQSLNISAKGKRTESCTPSWMAVDEEIT
Subjt:  VMQQHQSLNISAKGKRTESCTPSWMAVDEEIT

KAG7020314.1 hypothetical protein SDJN02_16998, partial [Cucurbita argyrosperma subsp. argyrosperma]8.6e-107100Show/hide
Query:  MERVFGTHWRKPADLQWMFSQDVFLYFSRCKFLEFLQHRTPFSLFVRYPCEFSSSLRLGYRRMESIQNALEETGGSAMDVFTRRFSLLLSMQISGIFAAS
        MERVFGTHWRKPADLQWMFSQDVFLYFSRCKFLEFLQHRTPFSLFVRYPCEFSSSLRLGYRRMESIQNALEETGGSAMDVFTRRFSLLLSMQISGIFAAS
Subjt:  MERVFGTHWRKPADLQWMFSQDVFLYFSRCKFLEFLQHRTPFSLFVRYPCEFSSSLRLGYRRMESIQNALEETGGSAMDVFTRRFSLLLSMQISGIFAAS

Query:  NSVFLVRTLSVRVFIFVMQQHQSLNISAKGKRTESCTPSWMAVDEEITEHPMTTIYGGRRSWLHMSTNKGRNLMLQVMKLKQSYCSNCRHSRHTR
        NSVFLVRTLSVRVFIFVMQQHQSLNISAKGKRTESCTPSWMAVDEEITEHPMTTIYGGRRSWLHMSTNKGRNLMLQVMKLKQSYCSNCRHSRHTR
Subjt:  NSVFLVRTLSVRVFIFVMQQHQSLNISAKGKRTESCTPSWMAVDEEITEHPMTTIYGGRRSWLHMSTNKGRNLMLQVMKLKQSYCSNCRHSRHTR

XP_022950981.1 uncharacterized protein LOC111453965 [Cucurbita moschata]1.7e-0691.89Show/hide
Query:  MDVFTRRFSLLLSMQISGIFAASNSVFLVRTLSVRVF
        MDV TRRFSLL SMQISG+FAASNSVFLVRTLSVRVF
Subjt:  MDVFTRRFSLLLSMQISGIFAASNSVFLVRTLSVRVF

XP_023002550.1 uncharacterized protein LOC111496362 [Cucurbita maxima]2.8e-0486.49Show/hide
Query:  MDVFTRRFSLLLSMQISGIFAASNSVFLVRTLSVRVF
        MDVF R FS L SMQISG+FAASNSVFLVRTLSVRVF
Subjt:  MDVFTRRFSLLLSMQISGIFAASNSVFLVRTLSVRVF

TrEMBL top hitse value%identityAlignment
A0A6J1GGB0 uncharacterized protein LOC1114539658.4e-0791.89Show/hide
Query:  MDVFTRRFSLLLSMQISGIFAASNSVFLVRTLSVRVF
        MDV TRRFSLL SMQISG+FAASNSVFLVRTLSVRVF
Subjt:  MDVFTRRFSLLLSMQISGIFAASNSVFLVRTLSVRVF

A0A6J1KP95 uncharacterized protein LOC1114963621.3e-0486.49Show/hide
Query:  MDVFTRRFSLLLSMQISGIFAASNSVFLVRTLSVRVF
        MDVF R FS L SMQISG+FAASNSVFLVRTLSVRVF
Subjt:  MDVFTRRFSLLLSMQISGIFAASNSVFLVRTLSVRVF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGAGTATTCGGAACGCATTGGAGGAAACCGGCGGATCTGCAATGGATGTTTTCACAAGACGTTTTTCTCTACTTCTCTCGATGCAAATTTCTGGAGTTTTTGCA
GCATCGGACTCCGTTTTCCTTGTTCGTACGTTATCCGTGCGAGTTTTCAAGCAGCCTGCGTCTTGGTTATCGAAGAATGGAGAGTATTCAGAACGCATTGGAGGAAACCG
GCGGATCTGCAATGGATGTTTTCACAAGACGTTTTTCTCTACTTCTCTCGATGCAAATTTCTGGAATTTTTGCAGCATCGAACTCCGTTTTCCTTGTTCGTACGTTATCC
GTGCGAGTTTTCATCTTCGTGATGCAGCAGCATCAATCACTCAATATTTCAGCCAAAGGAAAACGAACTGAAAGTTGTACTCCGTCATGGATGGCGGTCGATGAGGAAAT
AACCGAGCACCCAATGACTACTATTTATGGAGGAAGAAGAAGCTGGCTTCACATGAGCACCAATAAGGGAAGGAATCTGATGCTGCAAGTAATGAAGCTGAAACAGAGTT
ATTGCAGTAATTGTCGCCACAGTCGCCATACAAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGAGTATTCGGAACGCATTGGAGGAAACCGGCGGATCTGCAATGGATGTTTTCACAAGACGTTTTTCTCTACTTCTCTCGATGCAAATTTCTGGAGTTTTTGCA
GCATCGGACTCCGTTTTCCTTGTTCGTACGTTATCCGTGCGAGTTTTCAAGCAGCCTGCGTCTTGGTTATCGAAGAATGGAGAGTATTCAGAACGCATTGGAGGAAACCG
GCGGATCTGCAATGGATGTTTTCACAAGACGTTTTTCTCTACTTCTCTCGATGCAAATTTCTGGAATTTTTGCAGCATCGAACTCCGTTTTCCTTGTTCGTACGTTATCC
GTGCGAGTTTTCATCTTCGTGATGCAGCAGCATCAATCACTCAATATTTCAGCCAAAGGAAAACGAACTGAAAGTTGTACTCCGTCATGGATGGCGGTCGATGAGGAAAT
AACCGAGCACCCAATGACTACTATTTATGGAGGAAGAAGAAGCTGGCTTCACATGAGCACCAATAAGGGAAGGAATCTGATGCTGCAAGTAATGAAGCTGAAACAGAGTT
ATTGCAGTAATTGTCGCCACAGTCGCCATACAAGGTAAGAGACTAAAATCCCGCTTAAATCACATTTTTAAATTAAAGCATGATCATTAAAATATATTAAGAACTAACGA
ATTAAAGCATTATCATTAAAATATATTAAGAACTAACAATATGGTGCGCAACCAAAATACAACATTAGTTACTCTGGAATAACATCTCTTGGAAGAATAACATCTCTAGG
AAGCAAGATCTTTTGAGTAGAGTTTAAAATTTACTCCGATAGTTCTAAACCAAAATGAGTTGCAATATCAATTAGTTTATTTTATAATGGAGTGTTTTGAAGAAGAAAGA
GAATTTGGATAAAACCAACGTTCAAATCTAATACAACTTTTTTTGCCCGAGGAATAGATTGTTACCGTTTTTTTTTTTATTCGAATCAATTTATACCAAAATATTAAAGT
GATATACATAAAACTCTAAACTAGTAATTATATTAATTTAACTCTAAATTTTCATTAGTGTGTCAATTTTAAACTATTTATTAGA
Protein sequenceShow/hide protein sequence
MERVFGTHWRKPADLQWMFSQDVFLYFSRCKFLEFLQHRTPFSLFVRYPCEFSSSLRLGYRRMESIQNALEETGGSAMDVFTRRFSLLLSMQISGIFAASNSVFLVRTLS
VRVFIFVMQQHQSLNISAKGKRTESCTPSWMAVDEEITEHPMTTIYGGRRSWLHMSTNKGRNLMLQVMKLKQSYCSNCRHSRHTR