; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg03873 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg03873
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr12:1776733..1777977
RNA-Seq ExpressionCarg03873
SyntenyCarg03873
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585415.1 hypothetical protein SDJN03_18148, partial [Cucurbita argyrosperma subsp. sororia]4.4e-4887.29Show/hide
Query:  RGPSSSTLYSALGVCCQSLEHWRCYRESRGLSNSVDANYIRDELVTQVNEVVVVLVKETVRSTLEDVYRRWRCVIRVGAMGGIGYCAGAIGPMTRVVLPE
        RGPSSSTLYSALGVCCQSLEHWRCYRESRGLSNSVDANYIRDELVTQVNEVVVVLVKETVRSTL D    +      G  GGIGYCAGAIGPMTRVVL E
Subjt:  RGPSSSTLYSALGVCCQSLEHWRCYRESRGLSNSVDANYIRDELVTQVNEVVVVLVKETVRSTLEDVYRRWRCVIRVGAMGGIGYCAGAIGPMTRVVLPE

Query:  VWRTVFCSNGYTAKDSSG
        VWRTVFCSNGYTAKDSSG
Subjt:  VWRTVFCSNGYTAKDSSG
KAG7020334.1 hypothetical protein SDJN02_17018, partial [Cucurbita argyrosperma subsp. argyrosperma]5.7e-64100Show/hide
Query:  MCSSSRGPSSSTLYSALGVCCQSLEHWRCYRESRGLSNSVDANYIRDELVTQVNEVVVVLVKETVRSTLEDVYRRWRCVIRVGAMGGIGYCAGAIGPMTR
        MCSSSRGPSSSTLYSALGVCCQSLEHWRCYRESRGLSNSVDANYIRDELVTQVNEVVVVLVKETVRSTLEDVYRRWRCVIRVGAMGGIGYCAGAIGPMTR
Subjt:  MCSSSRGPSSSTLYSALGVCCQSLEHWRCYRESRGLSNSVDANYIRDELVTQVNEVVVVLVKETVRSTLEDVYRRWRCVIRVGAMGGIGYCAGAIGPMTR

Query:  VVLPEVWRTVFCSNGYTAKDSSG
        VVLPEVWRTVFCSNGYTAKDSSG
Subjt:  VVLPEVWRTVFCSNGYTAKDSSG
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCTCCTCCTCAAGGGGACCATCTAGCAGTACGCTTTACAGTGCCCTTGGTGTATGCTGTCAAAGCCTGGAACACTGGCGATGCTACAGAGAAAGTCGTGGTTTGAG
TAACAGTGTTGATGCCAATTACATTAGAGATGAACTGGTGACTCAAGTTAATGAAGTTGTGGTGGTGTTGGTGAAAGAGACAGTTCGTTCGACCCTCGAGGACGTGTACA
GGAGATGGCGATGTGTCATACGAGTCGGGGCAATGGGGGGGATCGGATATTGCGCCGGGGCTATCGGACCAATGACTCGTGTTGTTCTCCCTGAAGTTTGGAGGACGGTT
TTCTGTAGCAATGGGTATACTGCCAAGGATTCCTCAGGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGCTCCTCCTCAAGGGGACCATCTAGCAGTACGCTTTACAGTGCCCTTGGTGTATGCTGTCAAAGCCTGGAACACTGGCGATGCTACAGAGAAAGTCGTGGTTTGAG
TAACAGTGTTGATGCCAATTACATTAGAGATGAACTGGTGACTCAAGTTAATGAAGTTGTGGTGGTGTTGGTGAAAGAGACAGTTCGTTCGACCCTCGAGGACGTGTACA
GGAGATGGCGATGTGTCATACGAGTCGGGGCAATGGGGGGGATCGGATATTGCGCCGGGGCTATCGGACCAATGACTCGTGTTGTTCTCCCTGAAGTTTGGAGGACGGTT
TTCTGTAGCAATGGGTATACTGCCAAGGATTCCTCAGGGTAA
Protein sequenceShow/hide protein sequence
MCSSSRGPSSSTLYSALGVCCQSLEHWRCYRESRGLSNSVDANYIRDELVTQVNEVVVVLVKETVRSTLEDVYRRWRCVIRVGAMGGIGYCAGAIGPMTRVVLPEVWRTV
FCSNGYTAKDSSG