; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg03877 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg03877
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionselenoprotein H-like
Genome locationCarg_Chr12:1791766..1794452
RNA-Seq ExpressionCarg03877
SyntenyCarg03877
Gene Ontology termsGO:0005794 - Golgi apparatus (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585418.1 Fasciclin-like arabinogalactan protein 5, partial [Cucurbita argyrosperma subsp. sororia]1.5e-7785.49Show/hide
Query:  MAPKKRSKIQEDETAAAKPVPASSRVTRRSPRLAANSKADLMVEEPVVKLPKRKKAKRGPKENGKAEEVENEGEDLDAASEKLGVEAKNRAVVIEHCKQC
        MAPKKRSKIQEDETAAAKPVPASSRVTRRSPRLAANSKADLMVEEPVVKLPKRKKAKRGPKENGKAEEVENEGEDLDAASEKLGVEAKNRAVVIEHCKQC
Subjt:  MAPKKRSKIQEDETAAAKPVPASSRVTRRSPRLAANSKADLMVEEPVVKLPKRKKAKRGPKENGKAEEVENEGEDLDAASEKLGVEAKNRAVVIEHCKQC

Query:  QSFKKRAMEVQNGLEKGVPGITVLLNPDKSHSEVEVLEGNLEFATLGLGFSADSRAKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEE
        QSFKKRAMEVQNGLEKGVPGITVLLNPD                            KPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEE
Subjt:  QSFKKRAMEVQNGLEKGVPGITVLLNPDKSHSEVEVLEGNLEFATLGLGFSADSRAKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEE

KAG7020338.1 hypothetical protein SDJN02_17022 [Cucurbita argyrosperma subsp. argyrosperma]3.2e-104100Show/hide
Query:  MAPKKRSKIQEDETAAAKPVPASSRVTRRSPRLAANSKADLMVEEPVVKLPKRKKAKRGPKENGKAEEVENEGEDLDAASEKLGVEAKNRAVVIEHCKQC
        MAPKKRSKIQEDETAAAKPVPASSRVTRRSPRLAANSKADLMVEEPVVKLPKRKKAKRGPKENGKAEEVENEGEDLDAASEKLGVEAKNRAVVIEHCKQC
Subjt:  MAPKKRSKIQEDETAAAKPVPASSRVTRRSPRLAANSKADLMVEEPVVKLPKRKKAKRGPKENGKAEEVENEGEDLDAASEKLGVEAKNRAVVIEHCKQC

Query:  QSFKKRAMEVQNGLEKGVPGITVLLNPDKSHSEVEVLEGNLEFATLGLGFSADSRAKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIE
        QSFKKRAMEVQNGLEKGVPGITVLLNPDKSHSEVEVLEGNLEFATLGLGFSADSRAKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIE
Subjt:  QSFKKRAMEVQNGLEKGVPGITVLLNPDKSHSEVEVLEGNLEFATLGLGFSADSRAKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIE

Query:  KIKG
        KIKG
Subjt:  KIKG

XP_022950994.1 selenoprotein H-like isoform X1 [Cucurbita moschata]6.5e-8184.31Show/hide
Query:  MAPKKRSKIQEDETAAAKPVPASSRVTRRSPRLAANSKADLMVEEPVVKLPKRKKAKRGPKENGKAEEVENEGEDLDAASEKLGVEAKNRAVVIEHCKQC
        MAPKKRSKIQEDETA AKPVPASSRVTRRSPRLA NSKADL VEE VVKLPKRKKAKRGPKENGKAEEVENEGEDLDAASEKLGVEAKNRAVVIEHCKQC
Subjt:  MAPKKRSKIQEDETAAAKPVPASSRVTRRSPRLAANSKADLMVEEPVVKLPKRKKAKRGPKENGKAEEVENEGEDLDAASEKLGVEAKNRAVVIEHCKQC

Query:  QSFKKRAMEVQNGLEKGVPGITVLLNPDKSHSEVEVLEGNLEFATLGLGFSADSRAKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIE
        QSFKKRAMEVQNGLEKGVPGITVLLNPD                            KPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIE
Subjt:  QSFKKRAMEVQNGLEKGVPGITVLLNPDKSHSEVEVLEGNLEFATLGLGFSADSRAKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIE

Query:  KIKG
        KIKG
Subjt:  KIKG

XP_023002520.1 selenoprotein H-like isoform X1 [Cucurbita maxima]1.6e-7983.33Show/hide
Query:  MAPKKRSKIQEDETAAAKPVPASSRVTRRSPRLAANSKADLMVEEPVVKLPKRKKAKRGPKENGKAEEVENEGEDLDAASEKLGVEAKNRAVVIEHCKQC
        MAPKKRSKIQEDETAAAKPVP SSRVTRRSPRLAANSKADL VEEPVVKLPK+KKAKR PKEN KAEEVENEGEDLDAASEKLGVEAKNRAVVIEHCKQC
Subjt:  MAPKKRSKIQEDETAAAKPVPASSRVTRRSPRLAANSKADLMVEEPVVKLPKRKKAKRGPKENGKAEEVENEGEDLDAASEKLGVEAKNRAVVIEHCKQC

Query:  QSFKKRAMEVQNGLEKGVPGITVLLNPDKSHSEVEVLEGNLEFATLGLGFSADSRAKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIE
        QSFKKRAMEVQNGLEKGVPGITVLLNPDKS                            RRGCFEIRSEDGEKFISLLDMKRPFT+MKELDMEEVISDIIE
Subjt:  QSFKKRAMEVQNGLEKGVPGITVLLNPDKSHSEVEVLEGNLEFATLGLGFSADSRAKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIE

Query:  KIKG
        KIKG
Subjt:  KIKG

XP_023536837.1 selenoprotein H-like [Cucurbita pepo subsp. pepo]3.8e-8184.31Show/hide
Query:  MAPKKRSKIQEDETAAAKPVPASSRVTRRSPRLAANSKADLMVEEPVVKLPKRKKAKRGPKENGKAEEVENEGEDLDAASEKLGVEAKNRAVVIEHCKQC
        MAPKKRSKIQEDETAAAKPVPASSR TRRSPRLAANSKADL VEEPVVKLPKRKKAKR PKENGKAEEVENEGEDLDAASEKLGVEAKNRAVVIEHCKQC
Subjt:  MAPKKRSKIQEDETAAAKPVPASSRVTRRSPRLAANSKADLMVEEPVVKLPKRKKAKRGPKENGKAEEVENEGEDLDAASEKLGVEAKNRAVVIEHCKQC

Query:  QSFKKRAMEVQNGLEKGVPGITVLLNPDKSHSEVEVLEGNLEFATLGLGFSADSRAKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIE
        QSFKKRA+EVQNGLEKGVPGITVLLNPD                            KPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIE
Subjt:  QSFKKRAMEVQNGLEKGVPGITVLLNPDKSHSEVEVLEGNLEFATLGLGFSADSRAKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIE

Query:  KIKG
        KIKG
Subjt:  KIKG

TrEMBL top hitse value%identityAlignment
A0A6J1GHC6 selenoprotein H-like isoform X28.3e-6681.92Show/hide
Query:  MAPKKRSKIQEDETAAAKPVPASSRVTRRSPRLAANSKADLMVEEPVVKLPKRKKAKRGPKENGKAEEVENEGEDLDAASEKLGVEAKNRAVVIEHCKQC
        MAPKKRSKIQEDETA AKPVPASSRVTRRSPRLA NSKADL VEE VVKLPKRKKAKRGPKENGKAEEVENEGEDLDAASEKLGVEAKNRAVVIEHCKQC
Subjt:  MAPKKRSKIQEDETAAAKPVPASSRVTRRSPRLAANSKADLMVEEPVVKLPKRKKAKRGPKENGKAEEVENEGEDLDAASEKLGVEAKNRAVVIEHCKQC

Query:  QSFKKRAMEVQNGLEKGVPGITVLLNPDKSHSEVEVLEGNLEFATLGLGFSADSRAKPRRGCFEIRSEDGEKFISLL
        QSFKKRAMEVQNGLEKGVPGITVLLNPD                            KPRRGCFEIRSEDGEKFISLL
Subjt:  QSFKKRAMEVQNGLEKGVPGITVLLNPDKSHSEVEVLEGNLEFATLGLGFSADSRAKPRRGCFEIRSEDGEKFISLL

A0A6J1GHF7 selenoprotein H-like isoform X13.1e-8184.31Show/hide
Query:  MAPKKRSKIQEDETAAAKPVPASSRVTRRSPRLAANSKADLMVEEPVVKLPKRKKAKRGPKENGKAEEVENEGEDLDAASEKLGVEAKNRAVVIEHCKQC
        MAPKKRSKIQEDETA AKPVPASSRVTRRSPRLA NSKADL VEE VVKLPKRKKAKRGPKENGKAEEVENEGEDLDAASEKLGVEAKNRAVVIEHCKQC
Subjt:  MAPKKRSKIQEDETAAAKPVPASSRVTRRSPRLAANSKADLMVEEPVVKLPKRKKAKRGPKENGKAEEVENEGEDLDAASEKLGVEAKNRAVVIEHCKQC

Query:  QSFKKRAMEVQNGLEKGVPGITVLLNPDKSHSEVEVLEGNLEFATLGLGFSADSRAKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIE
        QSFKKRAMEVQNGLEKGVPGITVLLNPD                            KPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIE
Subjt:  QSFKKRAMEVQNGLEKGVPGITVLLNPDKSHSEVEVLEGNLEFATLGLGFSADSRAKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIE

Query:  KIKG
        KIKG
Subjt:  KIKG

A0A6J1K9R2 selenoprotein H-like1.9e-6268.12Show/hide
Query:  MAPKKRSKIQEDETAAA---KPVPASSRVTRRSPRLAANSKADLMVEEPVVKLPKRKKAKRGPKENGKAEEVENEGEDLDAASEKLGVEAKNRAVVIEHC
        MAP+KRSK QED+ AAA   KP P SS VTRRSPRLA NS ADL+VEE V +LPK KK KR PKENGKA+EV NEGE++DAAS+KL  +AKNR VVIE C
Subjt:  MAPKKRSKIQEDETAAA---KPVPASSRVTRRSPRLAANSKADLMVEEPVVKLPKRKKAKRGPKENGKAEEVENEGEDLDAASEKLGVEAKNRAVVIEHC

Query:  KQCQSFKKRAMEVQNGLEKGVPGITVLLNPDKSHSEVEVLEGNLEFATLGLGFSADSRAKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISD
        KQCQSFKKRA++VQ+GLE GV GITVLLNP+                            KPR+GCFEIRS+DGEKFISLLDMKRPFTRMKEL+MEEVISD
Subjt:  KQCQSFKKRAMEVQNGLEKGVPGITVLLNPDKSHSEVEVLEGNLEFATLGLGFSADSRAKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISD

Query:  IIEKIKG
        IIEKIKG
Subjt:  IIEKIKG

A0A6J1KLJ2 uncharacterized protein LOC111496337 isoform X29.2e-6581.36Show/hide
Query:  MAPKKRSKIQEDETAAAKPVPASSRVTRRSPRLAANSKADLMVEEPVVKLPKRKKAKRGPKENGKAEEVENEGEDLDAASEKLGVEAKNRAVVIEHCKQC
        MAPKKRSKIQEDETAAAKPVP SSRVTRRSPRLAANSKADL VEEPVVKLPK+KKAKR PKEN KAEEVENEGEDLDAASEKLGVEAKNRAVVIEHCKQC
Subjt:  MAPKKRSKIQEDETAAAKPVPASSRVTRRSPRLAANSKADLMVEEPVVKLPKRKKAKRGPKENGKAEEVENEGEDLDAASEKLGVEAKNRAVVIEHCKQC

Query:  QSFKKRAMEVQNGLEKGVPGITVLLNPDKSHSEVEVLEGNLEFATLGLGFSADSRAKPRRGCFEIRSEDGEKFISLL
        QSFKKRAMEVQNGLEKGVPGITVLLNPDKS                            RRGCFEIRSEDGEKFISLL
Subjt:  QSFKKRAMEVQNGLEKGVPGITVLLNPDKSHSEVEVLEGNLEFATLGLGFSADSRAKPRRGCFEIRSEDGEKFISLL

A0A6J1KP64 selenoprotein H-like isoform X17.7e-8083.33Show/hide
Query:  MAPKKRSKIQEDETAAAKPVPASSRVTRRSPRLAANSKADLMVEEPVVKLPKRKKAKRGPKENGKAEEVENEGEDLDAASEKLGVEAKNRAVVIEHCKQC
        MAPKKRSKIQEDETAAAKPVP SSRVTRRSPRLAANSKADL VEEPVVKLPK+KKAKR PKEN KAEEVENEGEDLDAASEKLGVEAKNRAVVIEHCKQC
Subjt:  MAPKKRSKIQEDETAAAKPVPASSRVTRRSPRLAANSKADLMVEEPVVKLPKRKKAKRGPKENGKAEEVENEGEDLDAASEKLGVEAKNRAVVIEHCKQC

Query:  QSFKKRAMEVQNGLEKGVPGITVLLNPDKSHSEVEVLEGNLEFATLGLGFSADSRAKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIE
        QSFKKRAMEVQNGLEKGVPGITVLLNPDKS                            RRGCFEIRSEDGEKFISLLDMKRPFT+MKELDMEEVISDIIE
Subjt:  QSFKKRAMEVQNGLEKGVPGITVLLNPDKSHSEVEVLEGNLEFATLGLGFSADSRAKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIE

Query:  KIKG
        KIKG
Subjt:  KIKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G24440.1 selenium binding5.0e-3144.9Show/hide
Query:  AAAKPVPASSRVTRRSPRLAANSKADLMVEEPVVKLPKRKKAKR--GPKENGKAEEV-----ENEGEDLDAASEKLGVEAKNRAVVIEHCKQCQSFKKRA
        A  + + +  R TR   +   +S   + +E P  K  K  KAK     K+  K EEV     + E ED DAA ++   ++  + +VIEHCKQC+SFK+RA
Subjt:  AAAKPVPASSRVTRRSPRLAANSKADLMVEEPVVKLPKRKKAKR--GPKENGKAEEV-----ENEGEDLDAASEKLGVEAKNRAVVIEHCKQCQSFKKRA

Query:  MEVQNGLEKGVPGITVLLNPDKSHSEVEVLEGNLEFATLGLGFSADSRAKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIEKIK
         EV+ GLE+ VPGI V +NPD                            KPRRGCFEIR E GE FISLL MKRPFT MKEL+MEEVI+DI+EKIK
Subjt:  MEVQNGLEKGVPGITVLLNPDKSHSEVEVLEGNLEFATLGLGFSADSRAKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIEKIK

AT4G31360.1 selenium binding5.6e-3043.32Show/hide
Query:  PKKRSKIQEDETAAAKPVPASSRVTR------RSPRLAANSKADLMVEEPVVKLPKRK-------KAKRGPKENGKAEEVENEGEDLDAASEKLGVEAKN
        P K+SK   +E A      ASSRVTR      RS      +KA     +P  K  KRK       +AK+G KE    EEVE   E ++   EK   E ++
Subjt:  PKKRSKIQEDETAAAKPVPASSRVTR------RSPRLAANSKADLMVEEPVVKLPKRK-------KAKRGPKENGKAEEVENEGEDLDAASEKLGVEAKN

Query:  ---RAVVIEHCKQCQSFKKRAMEVQNGLEKGVPGITVLLNPDKSHSEVEVLEGNLEFATLGLGFSADSRAKPRRGCFEIRSEDGEKFISLLDMKRPFTRM
             +VIEHCKQC +FK RA++V+  LE  VPG+TV LNP+                            KPRRGCFEIR E G+ FISLL+MKRPF  M
Subjt:  ---RAVVIEHCKQCQSFKKRAMEVQNGLEKGVPGITVLLNPDKSHSEVEVLEGNLEFATLGLGFSADSRAKPRRGCFEIRSEDGEKFISLLDMKRPFTRM

Query:  KELDMEEVISDIIEKIK
        K LDMEEVI DII+K+K
Subjt:  KELDMEEVISDIIEKIK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCCGAAAAAGCGAAGCAAGATCCAGGAAGACGAGACGGCGGCGGCGAAGCCGGTCCCGGCGTCGTCGAGGGTGACGAGAAGGTCGCCCCGACTGGCGGCGAACTC
GAAGGCCGATTTGATGGTGGAGGAGCCTGTGGTGAAGTTGCCGAAGAGGAAGAAGGCGAAACGTGGTCCGAAGGAGAATGGGAAGGCGGAGGAGGTTGAAAATGAGGGAG
AGGATCTTGACGCTGCCTCGGAGAAGCTTGGCGTGGAAGCTAAGAACAGAGCGGTTGTGATAGAACATTGTAAGCAGTGCCAATCGTTCAAGAAAAGGGCGATGGAGGTG
CAGAATGGTCTAGAGAAGGGTGTTCCTGGAATCACTGTTCTTCTCAACCCTGATAAGAGTCATAGTGAGGTGGAGGTTCTAGAGGGAAATCTTGAGTTTGCGACTTTAGG
ACTCGGGTTTTCAGCTGATTCACGAGCAAAACCAAGAAGAGGGTGCTTTGAAATTCGGAGTGAAGATGGCGAGAAGTTTATCAGTCTTCTGGACATGAAGCGACCGTTTA
CACGAATGAAGGAACTGGACATGGAGGAGGTAATTTCAGATATCATTGAGAAGATAAAAGGATAA
mRNA sequenceShow/hide mRNA sequence
CAGTCAACGGCCACGATCCATTCTCATCGTCCAAATTCATTTCCACCGTCGCTTCAAAATCCCACCGCCGATAACAAAAGCGCGGGAAAGCCAAACCTAATCCATCCTAT
AAACTGTGTATCACTGCCAACCAACGGTCACATACACAACTCTCAGTGGAAGTGGAACAGATAGATTGAACTTTGGAGCCGATAAATCTCGTTTCTTCCATTACACTGAG
TTGCTCTGTGTTTTTAGGGTTTCAGGTCTTCTTCCATGGCGCCGAAAAAGCGAAGCAAGATCCAGGAAGACGAGACGGCGGCGGCGAAGCCGGTCCCGGCGTCGTCGAGG
GTGACGAGAAGGTCGCCCCGACTGGCGGCGAACTCGAAGGCCGATTTGATGGTGGAGGAGCCTGTGGTGAAGTTGCCGAAGAGGAAGAAGGCGAAACGTGGTCCGAAGGA
GAATGGGAAGGCGGAGGAGGTTGAAAATGAGGGAGAGGATCTTGACGCTGCCTCGGAGAAGCTTGGCGTGGAAGCTAAGAACAGAGCGGTTGTGATAGAACATTGTAAGC
AGTGCCAATCGTTCAAGAAAAGGGCGATGGAGGTGCAGAATGGTCTAGAGAAGGGTGTTCCTGGAATCACTGTTCTTCTCAACCCTGATAAGAGTCATAGTGAGGTGGAG
GTTCTAGAGGGAAATCTTGAGTTTGCGACTTTAGGACTCGGGTTTTCAGCTGATTCACGAGCAAAACCAAGAAGAGGGTGCTTTGAAATTCGGAGTGAAGATGGCGAGAA
GTTTATCAGTCTTCTGGACATGAAGCGACCGTTTACACGAATGAAGGAACTGGACATGGAGGAGGTAATTTCAGATATCATTGAGAAGATAAAAGGATAATGAGAAAACC
CTTGATG
Protein sequenceShow/hide protein sequence
MAPKKRSKIQEDETAAAKPVPASSRVTRRSPRLAANSKADLMVEEPVVKLPKRKKAKRGPKENGKAEEVENEGEDLDAASEKLGVEAKNRAVVIEHCKQCQSFKKRAMEV
QNGLEKGVPGITVLLNPDKSHSEVEVLEGNLEFATLGLGFSADSRAKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIEKIKG