; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg03878 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg03878
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionflowering-promoting factor 1-like
Genome locationCarg_Chr12:1802627..1802959
RNA-Seq ExpressionCarg03878
SyntenyCarg03878
Gene Ontology termsGO:0009909 - regulation of flower development (biological process)
GO:0010228 - vegetative to reproductive phase transition of meristem (biological process)
InterPro domainsIPR039274 - Flowering-promoting factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132061.1 flowering-promoting factor 1-like [Momordica charantia]4.8e-5493.64Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLIYLPTGQAVSSYSSLEEILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK
        MSGVWVFKNG+IRLIENPQADSDGRLGNSRRKVLI+LPTGQ VSSYSSLEEILT+LGWERYYGGDP+LFQFHKRSSIDLISLPRDFAKFNS+HMYDIVIK
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLIYLPTGQAVSSYSSLEEILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK

Query:  NPNLFHVRDV
        NPNLFHVRD+
Subjt:  NPNLFHVRDV

XP_022950996.1 flowering-promoting factor 1-like protein 2 [Cucurbita moschata]1.8e-56100Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLIYLPTGQAVSSYSSLEEILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK
        MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLIYLPTGQAVSSYSSLEEILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLIYLPTGQAVSSYSSLEEILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK

Query:  NPNLFHVRDV
        NPNLFHVRDV
Subjt:  NPNLFHVRDV

XP_022961815.1 flowering-promoting factor 1-like [Cucurbita moschata]8.1e-5494.55Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLIYLPTGQAVSSYSSLEEILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK
        MSGVWVFKNGVIRLIENPQADS+GRLGNSRRKVLIYLPTGQAVSSYS L EILTSLGWERYYGGDPELFQFHKRSSIDLISLP+D+AKFNS+HMYDIVIK
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLIYLPTGQAVSSYSSLEEILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK

Query:  NPNLFHVRDV
        NPNLFHVRDV
Subjt:  NPNLFHVRDV

XP_022997475.1 flowering-promoting factor 1-like [Cucurbita maxima]4.8e-5494.55Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLIYLPTGQAVSSYSSLEEILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK
        MSGVWVFKNGVIRLIENPQADS+GRLGNSRRKVLIYLPTGQAVSSYS L+EILTSLGWERYYGGDPELFQFHKRSSIDLISLP+D+AKFNS+HMYDIVIK
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLIYLPTGQAVSSYSSLEEILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK

Query:  NPNLFHVRDV
        NPNLFHVRDV
Subjt:  NPNLFHVRDV

XP_023546289.1 flowering-promoting factor 1-like [Cucurbita pepo subsp. pepo]1.3e-5495.45Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLIYLPTGQAVSSYSSLEEILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK
        MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLIYLPTGQAVSSYS L+EILTSLGWERYYGGDPELFQFHKRSSIDLISLP+D+AKFNS+HMYDIVIK
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLIYLPTGQAVSSYSSLEEILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK

Query:  NPNLFHVRDV
        NPNLFHVRDV
Subjt:  NPNLFHVRDV

TrEMBL top hitse value%identityAlignment
A0A6J1BR67 flowering-promoting factor 1-like2.3e-5493.64Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLIYLPTGQAVSSYSSLEEILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK
        MSGVWVFKNG+IRLIENPQADSDGRLGNSRRKVLI+LPTGQ VSSYSSLEEILT+LGWERYYGGDP+LFQFHKRSSIDLISLPRDFAKFNS+HMYDIVIK
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLIYLPTGQAVSSYSSLEEILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK

Query:  NPNLFHVRDV
        NPNLFHVRD+
Subjt:  NPNLFHVRDV

A0A6J1GGC5 flowering-promoting factor 1-like protein 28.5e-57100Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLIYLPTGQAVSSYSSLEEILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK
        MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLIYLPTGQAVSSYSSLEEILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLIYLPTGQAVSSYSSLEEILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK

Query:  NPNLFHVRDV
        NPNLFHVRDV
Subjt:  NPNLFHVRDV

A0A6J1HDA8 flowering-promoting factor 1-like3.9e-5494.55Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLIYLPTGQAVSSYSSLEEILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK
        MSGVWVFKNGVIRLIENPQADS+GRLGNSRRKVLIYLPTGQAVSSYS L EILTSLGWERYYGGDPELFQFHKRSSIDLISLP+D+AKFNS+HMYDIVIK
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLIYLPTGQAVSSYSSLEEILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK

Query:  NPNLFHVRDV
        NPNLFHVRDV
Subjt:  NPNLFHVRDV

A0A6J1K9R7 flowering-promoting factor 1-like2.3e-5494.55Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLIYLPTGQAVSSYSSLEEILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK
        MSGVWVFKNGVIRLIENPQADS+GRLGNSRRKVLIYLPTGQAVSSYS L+EILTSLGWERYYGGDPELFQFHKRSSIDLISLP+D+AKFNS+HMYDIVIK
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLIYLPTGQAVSSYSSLEEILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK

Query:  NPNLFHVRDV
        NPNLFHVRDV
Subjt:  NPNLFHVRDV

A0A6J1KTX8 flowering-promoting factor 1-like protein 28.5e-57100Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLIYLPTGQAVSSYSSLEEILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK
        MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLIYLPTGQAVSSYSSLEEILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLIYLPTGQAVSSYSSLEEILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK

Query:  NPNLFHVRDV
        NPNLFHVRDV
Subjt:  NPNLFHVRDV

SwissProt top hitse value%identityAlignment
O23624 Flowering-promoting factor 18.8e-4375.68Show/hide
Query:  MSGVWVFKNGVIRLIENP-QADSDGRLGNSRRKVLIYLPTGQAVSSYSSLEEILTSLGWERYY-GGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIV
        MSGVWVFKNGVIRL+ENP Q+ SD +   +RRKV++YLPTG+ VSSYS+LE+IL SLGWERY+ GGD +L QFHKRSSIDLISLPRDF KFNS++MYDIV
Subjt:  MSGVWVFKNGVIRLIENP-QADSDGRLGNSRRKVLIYLPTGQAVSSYSSLEEILTSLGWERYY-GGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIV

Query:  IKNPNLFHVRD
        +KNPN FHVRD
Subjt:  IKNPNLFHVRD

O24340 Flowering-promoting factor 12.0e-4273.64Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLIYLPTGQAVSSYSSLEEILTSLGWERYY-GGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
        MSGVWVFKNGVIRL+ENP  +  G   NSRRKV++YLPTG+ +SSYS+LE+IL SLGWERY+ GGD +L QFHKRSSIDLISLP+DF KF+S++MYDIV+
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLIYLPTGQAVSSYSSLEEILTSLGWERYY-GGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI

Query:  KNPNLFHVRD
        KNPN FHVRD
Subjt:  KNPNLFHVRD

Q5Q0B3 Flowering-promoting factor 1-like protein 12.2e-3864.52Show/hide
Query:  MSGVWVF-KNGVIRLIENPQADSDGRLGNS-----------RRKVLIYLPTGQAVSSYSSLEEILTSLGWERYYGGD--PELFQFHKRSSIDLISLPRDF
        MSGVWVF KNGV+RL+ENP   S G    S           RRK+L++LP+ + VSSY SLE+IL +LGWERYY GD    L QFHKR+SIDLISLPRDF
Subjt:  MSGVWVF-KNGVIRLIENPQADSDGRLGNS-----------RRKVLIYLPTGQAVSSYSSLEEILTSLGWERYYGGD--PELFQFHKRSSIDLISLPRDF

Query:  AKFNSIHMYDIVIKNPNLFHVRDV
        +KFNSIHMYDIV+KNPN+FHVRD+
Subjt:  AKFNSIHMYDIVIKNPNLFHVRDV

Q9LGE3 Flowering-promoting factor 1-like protein 15.1e-3563.3Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLIYLPTGQAVSSYSSLEEILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK
        MSGVWVFKNGV+RL+E  QA +   +   RRK L++ P+GQ VSSY++LE  LT+LGWERYY  DP LFQFHKR S+DLISLP DF+ F+S+HMYDIV+K
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLIYLPTGQAVSSYSSLEEILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK

Query:  NPNLFHVRD
        N + F V D
Subjt:  NPNLFHVRD

Q9LXB5 Flowering-promoting factor 1-like protein 26.7e-4373.64Show/hide
Query:  MSGVWVFKNGVIRLIENP-QADSDGRLGNSRRKVLIYLPTGQAVSSYSSLEEILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
        MSGVWVF NGVIRL+ENP Q+       + RR VL+YLPTG+AVSSYSSLE+IL SLGWERY+ GD +L Q+HKRSSIDLISLPRDF+KFNS++MYDIV+
Subjt:  MSGVWVFKNGVIRLIENP-QADSDGRLGNSRRKVLIYLPTGQAVSSYSSLEEILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI

Query:  KNPNLFHVRD
        KNPN FHVRD
Subjt:  KNPNLFHVRD

Arabidopsis top hitse value%identityAlignment
AT4G31380.1 FPF1-like protein 11.6e-3964.52Show/hide
Query:  MSGVWVF-KNGVIRLIENPQADSDGRLGNS-----------RRKVLIYLPTGQAVSSYSSLEEILTSLGWERYYGGD--PELFQFHKRSSIDLISLPRDF
        MSGVWVF KNGV+RL+ENP   S G    S           RRK+L++LP+ + VSSY SLE+IL +LGWERYY GD    L QFHKR+SIDLISLPRDF
Subjt:  MSGVWVF-KNGVIRLIENPQADSDGRLGNS-----------RRKVLIYLPTGQAVSSYSSLEEILTSLGWERYYGGD--PELFQFHKRSSIDLISLPRDF

Query:  AKFNSIHMYDIVIKNPNLFHVRDV
        +KFNSIHMYDIV+KNPN+FHVRD+
Subjt:  AKFNSIHMYDIVIKNPNLFHVRDV

AT5G10625.1 BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:AT5G24860.1)4.8e-4473.64Show/hide
Query:  MSGVWVFKNGVIRLIENP-QADSDGRLGNSRRKVLIYLPTGQAVSSYSSLEEILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
        MSGVWVF NGVIRL+ENP Q+       + RR VL+YLPTG+AVSSYSSLE+IL SLGWERY+ GD +L Q+HKRSSIDLISLPRDF+KFNS++MYDIV+
Subjt:  MSGVWVFKNGVIRLIENP-QADSDGRLGNSRRKVLIYLPTGQAVSSYSSLEEILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI

Query:  KNPNLFHVRD
        KNPN FHVRD
Subjt:  KNPNLFHVRD

AT5G24860.1 flowering promoting factor 16.2e-4475.68Show/hide
Query:  MSGVWVFKNGVIRLIENP-QADSDGRLGNSRRKVLIYLPTGQAVSSYSSLEEILTSLGWERYY-GGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIV
        MSGVWVFKNGVIRL+ENP Q+ SD +   +RRKV++YLPTG+ VSSYS+LE+IL SLGWERY+ GGD +L QFHKRSSIDLISLPRDF KFNS++MYDIV
Subjt:  MSGVWVFKNGVIRLIENP-QADSDGRLGNSRRKVLIYLPTGQAVSSYSSLEEILTSLGWERYY-GGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIV

Query:  IKNPNLFHVRD
        +KNPN FHVRD
Subjt:  IKNPNLFHVRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGGAGTTTGGGTTTTCAAGAACGGTGTAATTCGCTTGATTGAAAATCCTCAAGCAGATTCTGATGGAAGGCTAGGCAACTCCAGACGAAAGGTATTGATATACCT
TCCGACGGGACAAGCAGTGTCATCCTACTCTTCCCTAGAGGAAATCCTCACGTCCTTGGGATGGGAGAGATACTATGGAGGGGATCCAGAACTCTTTCAGTTTCATAAAC
GTTCTTCCATTGATCTAATTTCTCTTCCTAGGGACTTCGCCAAGTTCAACTCCATTCACATGTATGACATAGTCATTAAAAATCCCAATCTCTTCCATGTTCGAGATGTG
TGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGGAGTTTGGGTTTTCAAGAACGGTGTAATTCGCTTGATTGAAAATCCTCAAGCAGATTCTGATGGAAGGCTAGGCAACTCCAGACGAAAGGTATTGATATACCT
TCCGACGGGACAAGCAGTGTCATCCTACTCTTCCCTAGAGGAAATCCTCACGTCCTTGGGATGGGAGAGATACTATGGAGGGGATCCAGAACTCTTTCAGTTTCATAAAC
GTTCTTCCATTGATCTAATTTCTCTTCCTAGGGACTTCGCCAAGTTCAACTCCATTCACATGTATGACATAGTCATTAAAAATCCCAATCTCTTCCATGTTCGAGATGTG
TGA
Protein sequenceShow/hide protein sequence
MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLIYLPTGQAVSSYSSLEEILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIKNPNLFHVRDV