; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg03886 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg03886
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionAminoacyl-tRNA hydrolase
Genome locationCarg_Chr12:1845845..1847459
RNA-Seq ExpressionCarg03886
SyntenyCarg03886
Gene Ontology termsGO:0004045 - aminoacyl-tRNA hydrolase activity (molecular function)
InterPro domainsIPR002833 - Peptidyl-tRNA hydrolase, PTH2
IPR023476 - Peptidyl-tRNA hydrolase II domain superfamily
IPR042237 - Putative peptidyl-tRNA hydrolase PTRHD1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585426.1 putative peptidyl-tRNA hydrolase PTRHD1, partial [Cucurbita argyrosperma subsp. sororia]7.6e-100100Show/hide
Query:  MASVISASRFTFSISNSSRLCWNARVWLPSSICLRSWNWNSISFSSASMSESGESSSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH
        MASVISASRFTFSISNSSRLCWNARVWLPSSICLRSWNWNSISFSSASMSESGESSSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MASVISASRFTFSISNSSRLCWNARVWLPSSICLRSWNWNSISFSSASMSESGESSSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKL
        ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKL
Subjt:  ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKL

KAG7020347.1 putative peptidyl-tRNA hydrolase PTRHD1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-101100Show/hide
Query:  MASVISASRFTFSISNSSRLCWNARVWLPSSICLRSWNWNSISFSSASMSESGESSSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH
        MASVISASRFTFSISNSSRLCWNARVWLPSSICLRSWNWNSISFSSASMSESGESSSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MASVISASRFTFSISNSSRLCWNARVWLPSSICLRSWNWNSISFSSASMSESGESSSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKLCK
        ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKLCK
Subjt:  ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKLCK

XP_022951520.1 putative peptidyl-tRNA hydrolase PTRHD1 isoform X1 [Cucurbita moschata]2.6e-10098.94Show/hide
Query:  MASVISASRFTFSISNSSRLCWNARVWLPSSICLRSWNWNSISFSSASMSESGESSSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH
        MASVISASRFTFSISNS RLCWNARVWLPSSICLRSWNWNSISFSSASMSESGES+SVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MASVISASRFTFSISNSSRLCWNARVWLPSSICLRSWNWNSISFSSASMSESGESSSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKLCK
        ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKLCK
Subjt:  ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKLCK

XP_022951521.1 putative peptidyl-tRNA hydrolase PTRHD1 isoform X2 [Cucurbita moschata]8.4e-9998.93Show/hide
Query:  MASVISASRFTFSISNSSRLCWNARVWLPSSICLRSWNWNSISFSSASMSESGESSSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH
        MASVISASRFTFSISNS RLCWNARVWLPSSICLRSWNWNSISFSSASMSESGES+SVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MASVISASRFTFSISNSSRLCWNARVWLPSSICLRSWNWNSISFSSASMSESGESSSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKL
        ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKL
Subjt:  ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKL

XP_023002512.1 putative peptidyl-tRNA hydrolase PTRHD1 isoform X1 [Cucurbita maxima]1.6e-9797.35Show/hide
Query:  MASVISASRFTFSISNSSRLCWNARVWLPSSICLRSWNWNSISFSSASMSESGESSSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH
        MASVISASRFTFSISNS+RLC NARVWLPSSICL SWNWNSISFSSASMSES ES+SVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MASVISASRFTFSISNSSRLCWNARVWLPSSICLRSWNWNSISFSSASMSESGESSSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKLCK
        ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKLCK
Subjt:  ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKLCK

TrEMBL top hitse value%identityAlignment
A0A6J1GHT5 Aminoacyl-tRNA hydrolase4.0e-9998.93Show/hide
Query:  MASVISASRFTFSISNSSRLCWNARVWLPSSICLRSWNWNSISFSSASMSESGESSSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH
        MASVISASRFTFSISNS RLCWNARVWLPSSICLRSWNWNSISFSSASMSESGES+SVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MASVISASRFTFSISNSSRLCWNARVWLPSSICLRSWNWNSISFSSASMSESGESSSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKL
        ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKL
Subjt:  ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKL

A0A6J1GJ11 Aminoacyl-tRNA hydrolase1.3e-10098.94Show/hide
Query:  MASVISASRFTFSISNSSRLCWNARVWLPSSICLRSWNWNSISFSSASMSESGESSSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH
        MASVISASRFTFSISNS RLCWNARVWLPSSICLRSWNWNSISFSSASMSESGES+SVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MASVISASRFTFSISNSSRLCWNARVWLPSSICLRSWNWNSISFSSASMSESGESSSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKLCK
        ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKLCK
Subjt:  ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKLCK

A0A6J1K304 Aminoacyl-tRNA hydrolase3.1e-7581.15Show/hide
Query:  MASVISASRFTFSISNSSRL--CWNARVWLPSSICLRSWNWNSISFSSASMSESGESSSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQG
        M SVISASRFTFSIS S++L  C  +RVW  SS+ LRS N NS  FSSASMSES ES+S  P DD     E+AADVL+QYVVLRRDLIDSWPLGSVVTQG
Subjt:  MASVISASRFTFSISNSSRL--CWNARVWLPSSICLRSWNWNSISFSSASMSESGESSSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQG

Query:  CHASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKLCK
        CHASVSAIWLNKDDP TSEYCSP NIDSMHKVTLEVKGETQIVNLSEKLK NSI HKLW+EQPENIPTCLA+KPYPKSVVS FFKKLKLCK
Subjt:  CHASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKLCK

A0A6J1KJQ6 Aminoacyl-tRNA hydrolase7.6e-9897.35Show/hide
Query:  MASVISASRFTFSISNSSRLCWNARVWLPSSICLRSWNWNSISFSSASMSESGESSSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH
        MASVISASRFTFSISNS+RLC NARVWLPSSICL SWNWNSISFSSASMSES ES+SVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MASVISASRFTFSISNSSRLCWNARVWLPSSICLRSWNWNSISFSSASMSESGESSSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKLCK
        ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKLCK
Subjt:  ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKLCK

A0A6J1KTS0 Aminoacyl-tRNA hydrolase2.5e-9697.33Show/hide
Query:  MASVISASRFTFSISNSSRLCWNARVWLPSSICLRSWNWNSISFSSASMSESGESSSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH
        MASVISASRFTFSISNS+RLC NARVWLPSSICL SWNWNSISFSSASMSES ES+SVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MASVISASRFTFSISNSSRLCWNARVWLPSSICLRSWNWNSISFSSASMSESGESSSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKL
        ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKL
Subjt:  ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKL

SwissProt top hitse value%identityAlignment
D3Z4S3 Putative peptidyl-tRNA hydrolase PTRHD17.5e-2648.74Show/hide
Query:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLAS
        +LVQY+VLR+DL     SWP G++V Q CHA+ +A+ L++D PHT+ Y   + +  M KV LE   ET +  L+E L+  +I H LW+EQPENI TC+A 
Subjt:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLAS

Query:  KPYPKSVVSPFFKKLKLCK
        +PYPK  VS + KK +L K
Subjt:  KPYPKSVVSPFFKKLKLCK

Q3SZ85 Putative peptidyl-tRNA hydrolase PTRHD16.1e-2851.26Show/hide
Query:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLAS
        +LVQY+VLR+DL     SWP G+VV Q CHA+ +A+ L++D PHT+ Y   + ++ M KV LE   ET +  L+E L+  +I HKLW+EQPENIPTC+A 
Subjt:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLAS

Query:  KPYPKSVVSPFFKKLKLCK
        +PYPK  VS + KK +L K
Subjt:  KPYPKSVVSPFFKKLKLCK

Q6GMV3 Putative peptidyl-tRNA hydrolase PTRHD12.2e-2548.74Show/hide
Query:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLAS
        VLVQY+VLR+DL     SWP G++V Q CHA+ +A+  ++D PHT+ Y   Q +  M KV LE   ET +  L+E L+  +I H LW+EQPENI TC+A 
Subjt:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLAS

Query:  KPYPKSVVSPFFKKLKLCK
        +PYPK  V  + KK +L K
Subjt:  KPYPKSVVSPFFKKLKLCK

Arabidopsis top hitse value%identityAlignment
AT5G10700.1 Peptidyl-tRNA hydrolase II (PTH2) family protein1.5e-5360Show/hide
Query:  MASVISASRFTFSISNSSRLCWNARVWLPSSICLRSWNWNSISFSSASMS-ESGESSSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGC
        MA+ + ++ F F I          R+    S  +R  ++   + +S SMS ++GE  +V+      + AE+  DV+VQYVVLRRDLIDSWPLGSVVTQGC
Subjt:  MASVISASRFTFSISNSSRLCWNARVWLPSSICLRSWNWNSISFSSASMS-ESGESSSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGC

Query:  HASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKLCK
        HASV+AIW  KDDP T +YC PQ+IDSMHKVTLEVKGETQ++NLSEKLK   I HKLW+EQPENIPTC+A+KPYPKS VS FFKKLKLCK
Subjt:  HASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKLCK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCGGTGATTTCAGCATCTCGATTTACATTCTCCATTTCGAATTCCTCGAGGCTCTGTTGGAACGCTAGGGTTTGGCTACCTTCTTCAATTTGTCTCCGCTCTTG
GAATTGGAATTCCATTTCGTTTAGCTCGGCTTCTATGAGTGAATCTGGTGAAAGTAGTTCTGTTCTTCCACTGGACGACGGCGGAGCGAAGGCGGAGGAGGCCGCCGATG
TTTTGGTTCAGTACGTGGTGCTACGGAGAGATCTTATCGATTCGTGGCCGCTCGGAAGTGTTGTGACTCAGGGATGCCATGCTTCAGTCTCCGCCATTTGGTTGAATAAA
GACGATCCTCACACTTCGGAGTACTGTAGTCCCCAAAATATCGATTCTATGCACAAGGTTACTCTCGAGGTGAAGGGAGAAACCCAGATCGTTAACTTATCAGAGAAACT
TAAAGCAAATTCAATCGTCCATAAACTGTGGGTAGAACAGCCAGAGAACATTCCAACATGTCTTGCCTCAAAGCCCTACCCCAAATCAGTTGTATCACCATTTTTTAAAA
AGCTGAAACTCTGTAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCATCGGTGATTTCAGCATCTCGATTTACATTCTCCATTTCGAATTCCTCGAGGCTCTGTTGGAACGCTAGGGTTTGGCTACCTTCTTCAATTTGTCTCCGCTCTTG
GAATTGGAATTCCATTTCGTTTAGCTCGGCTTCTATGAGTGAATCTGGTGAAAGTAGTTCTGTTCTTCCACTGGACGACGGCGGAGCGAAGGCGGAGGAGGCCGCCGATG
TTTTGGTTCAGTACGTGGTGCTACGGAGAGATCTTATCGATTCGTGGCCGCTCGGAAGTGTTGTGACTCAGGGATGCCATGCTTCAGTCTCCGCCATTTGGTTGAATAAA
GACGATCCTCACACTTCGGAGTACTGTAGTCCCCAAAATATCGATTCTATGCACAAGGTTACTCTCGAGGTGAAGGGAGAAACCCAGATCGTTAACTTATCAGAGAAACT
TAAAGCAAATTCAATCGTCCATAAACTGTGGGTAGAACAGCCAGAGAACATTCCAACATGTCTTGCCTCAAAGCCCTACCCCAAATCAGTTGTATCACCATTTTTTAAAA
AGCTGAAACTCTGTAAGTGATGGAGTATTAAATTTTAAGGATTGATGGGCAATAATTTCCGTTTCAACGACCCTCCCCTACCCAAAAAAGTAAGAGAGAAGAACGGCTTT
CGTGAATTCGACGTTAAAAGGGCTGCTGATTATTTTTATGCACCTCTTCTAGTTCATGTTAAACTCTGAATAATTCATTCTACGTTTTGAATTCAGAACTGCAATCTATT
TCTATAGAGATCATGCAGCATACACAGTAGTTCGTAATCATAAAAGAGACGTGGAGAAAGGTCAAAATTCTCTATCCATCTTAAGGTATGTATATCAGTATATCTATTTT
TAAGATAGTA
Protein sequenceShow/hide protein sequence
MASVISASRFTFSISNSSRLCWNARVWLPSSICLRSWNWNSISFSSASMSESGESSSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCHASVSAIWLNK
DDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKLCK