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Carg03899 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg03899
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptioncoiled-coil domain-containing protein 93 isoform X1
Genome locationCarg_Chr12:1916625..1919563
RNA-Seq ExpressionCarg03899
SyntenyCarg03899
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585441.1 hypothetical protein SDJN03_18174, partial [Cucurbita argyrosperma subsp. sororia]1.4e-1898.21Show/hide
Query:  VDTLI-ESQKELNSVKKALASTLRDTLALKRLLMTCQPKLNSSGLLFSYYPSCFPS
        VDTLI ESQKELNSVKKALASTLRDTLALKRLLMTCQPKLNSSGLLFSYYPSCFPS
Subjt:  VDTLI-ESQKELNSVKKALASTLRDTLALKRLLMTCQPKLNSSGLLFSYYPSCFPS

KAG7020360.1 hypothetical protein SDJN02_17044 [Cucurbita argyrosperma subsp. argyrosperma]8.1e-35100Show/hide
Query:  MKLQDEIIKVEGRLIGDHDSSSFSDSVDTLIESQKELNSVKKALASTLRDTLALKRLLMTCQPKLNSSGLLFSYYPSCFPS
        MKLQDEIIKVEGRLIGDHDSSSFSDSVDTLIESQKELNSVKKALASTLRDTLALKRLLMTCQPKLNSSGLLFSYYPSCFPS
Subjt:  MKLQDEIIKVEGRLIGDHDSSSFSDSVDTLIESQKELNSVKKALASTLRDTLALKRLLMTCQPKLNSSGLLFSYYPSCFPS

XP_022131907.1 coiled-coil domain-containing protein 93 isoform X1 [Momordica charantia]2.4e-1075.86Show/hide
Query:  KLQDEIIKVEGRLIGDHDSSSFSDSVDTLI-ESQKELNSVKKALASTLRDTLALKRLL
        KLQDEII++EGRL  DHD SS  DS+D LI ESQ+ELNSVKK LAS LR+TLALKRLL
Subjt:  KLQDEIIKVEGRLIGDHDSSSFSDSVDTLI-ESQKELNSVKKALASTLRDTLALKRLL

XP_022131909.1 coiled-coil domain-containing protein 93 isoform X2 [Momordica charantia]2.4e-1075.86Show/hide
Query:  KLQDEIIKVEGRLIGDHDSSSFSDSVDTLI-ESQKELNSVKKALASTLRDTLALKRLL
        KLQDEII++EGRL  DHD SS  DS+D LI ESQ+ELNSVKK LAS LR+TLALKRLL
Subjt:  KLQDEIIKVEGRLIGDHDSSSFSDSVDTLI-ESQKELNSVKKALASTLRDTLALKRLL

XP_022131911.1 coiled-coil domain-containing protein 93 isoform X3 [Momordica charantia]2.4e-1075.86Show/hide
Query:  KLQDEIIKVEGRLIGDHDSSSFSDSVDTLI-ESQKELNSVKKALASTLRDTLALKRLL
        KLQDEII++EGRL  DHD SS  DS+D LI ESQ+ELNSVKK LAS LR+TLALKRLL
Subjt:  KLQDEIIKVEGRLIGDHDSSSFSDSVDTLI-ESQKELNSVKKALASTLRDTLALKRLL

TrEMBL top hitse value%identityAlignment
A0A6J1BQS7 coiled-coil domain-containing protein 93 isoform X31.2e-1075.86Show/hide
Query:  KLQDEIIKVEGRLIGDHDSSSFSDSVDTLI-ESQKELNSVKKALASTLRDTLALKRLL
        KLQDEII++EGRL  DHD SS  DS+D LI ESQ+ELNSVKK LAS LR+TLALKRLL
Subjt:  KLQDEIIKVEGRLIGDHDSSSFSDSVDTLI-ESQKELNSVKKALASTLRDTLALKRLL

A0A6J1BQZ9 coiled-coil domain-containing protein 93 isoform X21.2e-1075.86Show/hide
Query:  KLQDEIIKVEGRLIGDHDSSSFSDSVDTLI-ESQKELNSVKKALASTLRDTLALKRLL
        KLQDEII++EGRL  DHD SS  DS+D LI ESQ+ELNSVKK LAS LR+TLALKRLL
Subjt:  KLQDEIIKVEGRLIGDHDSSSFSDSVDTLI-ESQKELNSVKKALASTLRDTLALKRLL

A0A6J1BSB1 coiled-coil domain-containing protein 93 isoform X11.2e-1075.86Show/hide
Query:  KLQDEIIKVEGRLIGDHDSSSFSDSVDTLI-ESQKELNSVKKALASTLRDTLALKRLL
        KLQDEII++EGRL  DHD SS  DS+D LI ESQ+ELNSVKK LAS LR+TLALKRLL
Subjt:  KLQDEIIKVEGRLIGDHDSSSFSDSVDTLI-ESQKELNSVKKALASTLRDTLALKRLL

A0A6J1EP31 coiled-coil domain-containing protein 93 isoform X12.0e-1069.49Show/hide
Query:  MKLQDEIIKVEGRLIGDHDSSSFSDSVDTLI-ESQKELNSVKKALASTLRDTLALKRLL
        +KLQ EI ++EGRL GDH+ S+F DS+D  I ES++ELNSVKKALAS LR+TLALKRLL
Subjt:  MKLQDEIIKVEGRLIGDHDSSSFSDSVDTLI-ESQKELNSVKKALASTLRDTLALKRLL

A0A6J1EPR3 coiled-coil domain-containing protein 93 isoform X22.0e-1069.49Show/hide
Query:  MKLQDEIIKVEGRLIGDHDSSSFSDSVDTLI-ESQKELNSVKKALASTLRDTLALKRLL
        +KLQ EI ++EGRL GDH+ S+F DS+D  I ES++ELNSVKKALAS LR+TLALKRLL
Subjt:  MKLQDEIIKVEGRLIGDHDSSSFSDSVDTLI-ESQKELNSVKKALASTLRDTLALKRLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCTGCAAGATGAGATTATTAAGGTGGAAGGAAGATTGATAGGAGACCATGATAGCTCAAGCTTCTCAGATAGCGTAGATACTTTGATTGAATCTCAGAAGGAATT
GAATTCAGTGAAGAAGGCACTTGCATCTACATTGAGGGACACGTTAGCATTAAAGAGGCTCTTGATGACGTGCCAACCCAAACTGAACTCATCCGGTTTGTTGTTTTCTT
ATTATCCTTCCTGTTTTCCTTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTTCTTCGTCGGATAAGCTGGATTCCGGCATTTTCTGCGTCGTCTTGCGAGCAAGAGGTTTGGACTCTGAGATCTTATTTTCCTTTATGCAGTGGAGCGCCATCCG
CATAGATCCATGATCTGAATTCCTATCTATTTATAATGTGAAGCGTATGAAGCTGCAAGATGAGATTATTAAGGTGGAAGGAAGATTGATAGGAGACCATGATAGCTCAA
GCTTCTCAGATAGCGTAGATACTTTGATTGAATCTCAGAAGGAATTGAATTCAGTGAAGAAGGCACTTGCATCTACATTGAGGGACACGTTAGCATTAAAGAGGCTCTTG
ATGACGTGCCAACCCAAACTGAACTCATCCGGTTTGTTGTTTTCTTATTATCCTTCCTGTTTTCCTTCCTAAAAAT
Protein sequenceShow/hide protein sequence
MKLQDEIIKVEGRLIGDHDSSSFSDSVDTLIESQKELNSVKKALASTLRDTLALKRLLMTCQPKLNSSGLLFSYYPSCFPS