; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg03911 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg03911
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptiontRNA (Cytosine(38)-C(5))-methyltransferase
Genome locationCarg_Chr12:1987601..1990753
RNA-Seq ExpressionCarg03911
SyntenyCarg03911
Gene Ontology termsNA
InterPro domainsIPR029063 - S-adenosyl-L-methionine-dependent methyltransferase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585457.1 tRNA (cytosine(38)-C(5))-methyltransferase 2, partial [Cucurbita argyrosperma subsp. sororia]8.0e-75100Show/hide
Query:  MENVGFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFCLAKRRLLSFQRQSYNNQLLWRPSPLLENDAISYYRYVKGTGSPLSPFKAEMVD
        MENVGFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFCLAKRRLLSFQRQSYNNQLLWRPSPLLENDAISYYRYVKGTGSPLSPFKAEMVD
Subjt:  MENVGFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFCLAKRRLLSFQRQSYNNQLLWRPSPLLENDAISYYRYVKGTGSPLSPFKAEMVD

Query:  KAHSLKEGTLRYCTPREVANLHSFPEDSQFPQHIGLRQ
        KAHSLKEGTLRYCTPREVANLHSFPEDSQFPQHIGLRQ
Subjt:  KAHSLKEGTLRYCTPREVANLHSFPEDSQFPQHIGLRQ

KAG7020372.1 tRNA (cytosine(38)-C(5))-methyltransferase, partial [Cucurbita argyrosperma subsp. argyrosperma]8.0e-75100Show/hide
Query:  MENVGFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFCLAKRRLLSFQRQSYNNQLLWRPSPLLENDAISYYRYVKGTGSPLSPFKAEMVD
        MENVGFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFCLAKRRLLSFQRQSYNNQLLWRPSPLLENDAISYYRYVKGTGSPLSPFKAEMVD
Subjt:  MENVGFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFCLAKRRLLSFQRQSYNNQLLWRPSPLLENDAISYYRYVKGTGSPLSPFKAEMVD

Query:  KAHSLKEGTLRYCTPREVANLHSFPEDSQFPQHIGLRQ
        KAHSLKEGTLRYCTPREVANLHSFPEDSQFPQHIGLRQ
Subjt:  KAHSLKEGTLRYCTPREVANLHSFPEDSQFPQHIGLRQ

XP_022132298.1 DNA (cytosine-5)-methyltransferase isoform X1 [Momordica charantia]7.1e-4750.21Show/hide
Query:  MEN-VGFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFCLAKRRLLSFQRQSYNNQLLWRPSPLLEND-----------------------
        MEN VGFETSDTHTKM++ILEKADFSRQEFILSPM FGVPYSRPRYFCLAKRR LSF R  YNNQLLW PSPLLEND                       
Subjt:  MEN-VGFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFCLAKRRLLSFQRQSYNNQLLWRPSPLLEND-----------------------

Query:  -----------------------------------------------------------------------AISYYRYVKGTGSPLSPFKAEMVDKAHSL
                                                                                 SYYRYVKGTGS L+PF+ E + KAHSL
Subjt:  -----------------------------------------------------------------------AISYYRYVKGTGSPLSPFKAEMVDKAHSL

Query:  KEGTLRYCTPREVANLHSFPEDSQFPQHIGLRQ
        KE  LRY TPREVANLHSFPED QFPQHIGLRQ
Subjt:  KEGTLRYCTPREVANLHSFPEDSQFPQHIGLRQ

XP_022132299.1 tRNA (cytosine(38)-C(5))-methyltransferase isoform X2 [Momordica charantia]7.1e-4750.21Show/hide
Query:  MEN-VGFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFCLAKRRLLSFQRQSYNNQLLWRPSPLLEND-----------------------
        MEN VGFETSDTHTKM++ILEKADFSRQEFILSPM FGVPYSRPRYFCLAKRR LSF R  YNNQLLW PSPLLEND                       
Subjt:  MEN-VGFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFCLAKRRLLSFQRQSYNNQLLWRPSPLLEND-----------------------

Query:  -----------------------------------------------------------------------AISYYRYVKGTGSPLSPFKAEMVDKAHSL
                                                                                 SYYRYVKGTGS L+PF+ E + KAHSL
Subjt:  -----------------------------------------------------------------------AISYYRYVKGTGSPLSPFKAEMVDKAHSL

Query:  KEGTLRYCTPREVANLHSFPEDSQFPQHIGLRQ
        KE  LRY TPREVANLHSFPED QFPQHIGLRQ
Subjt:  KEGTLRYCTPREVANLHSFPEDSQFPQHIGLRQ

XP_038884641.1 tRNA (cytosine(38)-C(5))-methyltransferase 2 isoform X2 [Benincasa hispida]1.2e-4649.36Show/hide
Query:  MEN-VGFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFCLAKRRLLSFQRQSYNNQLLWRPSPLLENDA----------------------
        MEN VGFETSDTHTKM++ILEKA FSRQEFILSPM FGVPYSRPRYFCLAKR+ LSFQ+Q YN+QLLW PSPLLENDA                      
Subjt:  MEN-VGFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFCLAKRRLLSFQRQSYNNQLLWRPSPLLENDA----------------------

Query:  --------------------------------------------------------------------------ISYYRYVKGTGSPLSPFKAEMVDKAH
                                                                                   SYYRYVKGTGS L+PF+AE + KAH
Subjt:  --------------------------------------------------------------------------ISYYRYVKGTGSPLSPFKAEMVDKAH

Query:  SLKEGTLRYCTPREVANLHSFPEDSQFPQHIGLRQ
        SLKE  LRY TPREVANLHSFPED QFP+HIGLRQ
Subjt:  SLKEGTLRYCTPREVANLHSFPEDSQFPQHIGLRQ

TrEMBL top hitse value%identityAlignment
A0A1S3BC07 tRNA (Cytosine(38)-C(5))-methyltransferase isoform X16.5e-4648.72Show/hide
Query:  MEN-VGFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFCLAKRRLLSFQRQSYNNQLLWRPSPLLENDA----------------------
        MEN VGFETSDTHTKM++ILEKA FS QEFILSPM FGVPYSRPRYFCLAKR+ LSFQ+Q +NNQLLW PSPLL+NDA                      
Subjt:  MEN-VGFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFCLAKRRLLSFQRQSYNNQLLWRPSPLLENDA----------------------

Query:  -------------------------------------------------------------------------ISYYRYVKGTGSPLSPFKAEMVDKAHS
                                                                                  SYYRYVKGTGS L+PF+AE + KAHS
Subjt:  -------------------------------------------------------------------------ISYYRYVKGTGSPLSPFKAEMVDKAHS

Query:  LKEGTLRYCTPREVANLHSFPEDSQFPQHIGLRQ
        LKE  LRY TPREVANLHSFP+D QFPQHIGLRQ
Subjt:  LKEGTLRYCTPREVANLHSFPEDSQFPQHIGLRQ

A0A1S3BC14 tRNA (Cytosine(38)-C(5))-methyltransferase isoform X26.5e-4648.72Show/hide
Query:  MEN-VGFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFCLAKRRLLSFQRQSYNNQLLWRPSPLLENDA----------------------
        MEN VGFETSDTHTKM++ILEKA FS QEFILSPM FGVPYSRPRYFCLAKR+ LSFQ+Q +NNQLLW PSPLL+NDA                      
Subjt:  MEN-VGFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFCLAKRRLLSFQRQSYNNQLLWRPSPLLENDA----------------------

Query:  -------------------------------------------------------------------------ISYYRYVKGTGSPLSPFKAEMVDKAHS
                                                                                  SYYRYVKGTGS L+PF+AE + KAHS
Subjt:  -------------------------------------------------------------------------ISYYRYVKGTGSPLSPFKAEMVDKAHS

Query:  LKEGTLRYCTPREVANLHSFPEDSQFPQHIGLRQ
        LKE  LRY TPREVANLHSFP+D QFPQHIGLRQ
Subjt:  LKEGTLRYCTPREVANLHSFPEDSQFPQHIGLRQ

A0A5A7VCE7 tRNA (Cytosine(38)-C(5))-methyltransferase isoform X16.5e-4648.72Show/hide
Query:  MEN-VGFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFCLAKRRLLSFQRQSYNNQLLWRPSPLLENDA----------------------
        MEN VGFETSDTHTKM++ILEKA FS QEFILSPM FGVPYSRPRYFCLAKR+ LSFQ+Q +NNQLLW PSPLL+NDA                      
Subjt:  MEN-VGFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFCLAKRRLLSFQRQSYNNQLLWRPSPLLENDA----------------------

Query:  -------------------------------------------------------------------------ISYYRYVKGTGSPLSPFKAEMVDKAHS
                                                                                  SYYRYVKGTGS L+PF+AE + KAHS
Subjt:  -------------------------------------------------------------------------ISYYRYVKGTGSPLSPFKAEMVDKAHS

Query:  LKEGTLRYCTPREVANLHSFPEDSQFPQHIGLRQ
        LKE  LRY TPREVANLHSFP+D QFPQHIGLRQ
Subjt:  LKEGTLRYCTPREVANLHSFPEDSQFPQHIGLRQ

A0A6J1BSP1 tRNA (Cytosine(38)-C(5))-methyltransferase isoform X23.4e-4750.21Show/hide
Query:  MEN-VGFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFCLAKRRLLSFQRQSYNNQLLWRPSPLLEND-----------------------
        MEN VGFETSDTHTKM++ILEKADFSRQEFILSPM FGVPYSRPRYFCLAKRR LSF R  YNNQLLW PSPLLEND                       
Subjt:  MEN-VGFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFCLAKRRLLSFQRQSYNNQLLWRPSPLLEND-----------------------

Query:  -----------------------------------------------------------------------AISYYRYVKGTGSPLSPFKAEMVDKAHSL
                                                                                 SYYRYVKGTGS L+PF+ E + KAHSL
Subjt:  -----------------------------------------------------------------------AISYYRYVKGTGSPLSPFKAEMVDKAHSL

Query:  KEGTLRYCTPREVANLHSFPEDSQFPQHIGLRQ
        KE  LRY TPREVANLHSFPED QFPQHIGLRQ
Subjt:  KEGTLRYCTPREVANLHSFPEDSQFPQHIGLRQ

A0A6J1BVV7 DNA (Cytosine-5)-methyltransferase isoform X13.4e-4750.21Show/hide
Query:  MEN-VGFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFCLAKRRLLSFQRQSYNNQLLWRPSPLLEND-----------------------
        MEN VGFETSDTHTKM++ILEKADFSRQEFILSPM FGVPYSRPRYFCLAKRR LSF R  YNNQLLW PSPLLEND                       
Subjt:  MEN-VGFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFCLAKRRLLSFQRQSYNNQLLWRPSPLLEND-----------------------

Query:  -----------------------------------------------------------------------AISYYRYVKGTGSPLSPFKAEMVDKAHSL
                                                                                 SYYRYVKGTGS L+PF+ E + KAHSL
Subjt:  -----------------------------------------------------------------------AISYYRYVKGTGSPLSPFKAEMVDKAHSL

Query:  KEGTLRYCTPREVANLHSFPEDSQFPQHIGLRQ
        KE  LRY TPREVANLHSFPED QFPQHIGLRQ
Subjt:  KEGTLRYCTPREVANLHSFPEDSQFPQHIGLRQ

SwissProt top hitse value%identityAlignment
A0A2H1VE33 tRNA (cytosine(38)-C(5))-methyltransferase5.5e-1027.32Show/hide
Query:  MENV-GFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFCLAKRRLLSFQRQSYNNQLLWRP---------SPLLEND--------------
        MENV GFE S      +D L++ +F  QEF+L P   GVP SR RY+C A+R  L++  +  +  +   P           ++E D              
Subjt:  MENV-GFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFCLAKRRLLSFQRQSYNNQLLWRP---------SPLLEND--------------

Query:  -----------------AISYYRYVKGTGSPLSPFKAEMVDKAHS---------------LKEGTLRYCTPREVANLHSFPEDSQFPQHIGLRQ
                           +Y  Y  GTGS  +    E+V K +                 KE  LRY TP+EV  +  FP+    P +I ++Q
Subjt:  -----------------AISYYRYVKGTGSPLSPFKAEMVDKAHS---------------LKEGTLRYCTPREVANLHSFPEDSQFPQHIGLRQ

F4JWT7 tRNA (cytosine(38)-C(5))-methyltransferase 22.7e-3338.6Show/hide
Query:  VGFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFCLAKRRLLSFQRQSYNNQLLWRPSPLL------------------------------
        VGFETSDTH +M+  L K D+  QEFILSP+ FGVPYSRPRYFCLAKR+ L F+ Q  NN+LLW P PL                               
Subjt:  VGFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFCLAKRRLLSFQRQSYNNQLLWRPSPLL------------------------------

Query:  ---------------------------ENDAI------------------------------------SYYRYVKGTGSPLSPFKAEMVDKAHSLKEGTL
                                   E D++                                    SYYRYVKGTGS L+  + ++  K   LKE  L
Subjt:  ---------------------------ENDAI------------------------------------SYYRYVKGTGSPLSPFKAEMVDKAHSLKEGTL

Query:  RYCTPREVANLHSFPEDSQFPQHIGLRQ
        RY TPREVAN HSFPED +FP+HI LRQ
Subjt:  RYCTPREVANLHSFPEDSQFPQHIGLRQ

O14717 tRNA (cytosine(38)-C(5))-methyltransferase1.1e-0549.02Show/hide
Query:  MENV-GFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFCLAK
        +ENV GFE S T   ++  +E   F  QEF+LSP   G+P SR RYF +AK
Subjt:  MENV-GFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFCLAK

O55055 tRNA (cytosine(38)-C(5))-methyltransferase1.4e-0541.43Show/hide
Query:  MENV-GFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFCLAKRRLLSFQRQSYNNQLLWRP
        +ENV GFE S T   ++  +E   F  QEF+LSP   G+P SR RYF +AK +   F  Q+    L+  P
Subjt:  MENV-GFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFCLAKRRLLSFQRQSYNNQLLWRP

Q7YS61 tRNA (cytosine(38)-C(5))-methyltransferase1.1e-0541.43Show/hide
Query:  MENV-GFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFCLAKRRLLSFQRQSYNNQLLWRP
        +ENV GFE S T   ++  +E   F  QEF+LSP   G+P SR RYF +AK +   F  Q+    L+  P
Subjt:  MENV-GFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFCLAKRRLLSFQRQSYNNQLLWRP

Arabidopsis top hitse value%identityAlignment
AT5G25480.1 DNA methyltransferase-21.9e-3438.6Show/hide
Query:  VGFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFCLAKRRLLSFQRQSYNNQLLWRPSPLL------------------------------
        VGFETSDTH +M+  L K D+  QEFILSP+ FGVPYSRPRYFCLAKR+ L F+ Q  NN+LLW P PL                               
Subjt:  VGFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFCLAKRRLLSFQRQSYNNQLLWRPSPLL------------------------------

Query:  ---------------------------ENDAI------------------------------------SYYRYVKGTGSPLSPFKAEMVDKAHSLKEGTL
                                   E D++                                    SYYRYVKGTGS L+  + ++  K   LKE  L
Subjt:  ---------------------------ENDAI------------------------------------SYYRYVKGTGSPLSPFKAEMVDKAHSLKEGTL

Query:  RYCTPREVANLHSFPEDSQFPQHIGLRQ
        RY TPREVAN HSFPED +FP+HI LRQ
Subjt:  RYCTPREVANLHSFPEDSQFPQHIGLRQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAATGTTGGATTTGAGACATCTGACACACATACAAAAATGGTTGATATATTGGAAAAAGCTGATTTTTCTAGGCAGGAGTTCATTTTAAGCCCAATGCATTTTGG
TGTTCCATATTCCAGACCACGATACTTCTGCCTGGCTAAAAGGAGGCTTTTATCCTTTCAAAGGCAATCATACAATAATCAACTTCTTTGGCGTCCCAGTCCATTACTCG
AGAATGATGCGATAAGCTACTACCGATACGTGAAGGGCACCGGCTCTCCTTTGTCACCTTTTAAGGCGGAAATGGTGGATAAGGCTCATTCTCTGAAAGAGGGGACGCTC
AGATATTGTACTCCTAGAGAGGTTGCTAACTTGCATTCCTTTCCGGAAGATTCTCAATTTCCACAGCATATTGGCCTTAGGCAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAATGTTGGATTTGAGACATCTGACACACATACAAAAATGGTTGATATATTGGAAAAAGCTGATTTTTCTAGGCAGGAGTTCATTTTAAGCCCAATGCATTTTGG
TGTTCCATATTCCAGACCACGATACTTCTGCCTGGCTAAAAGGAGGCTTTTATCCTTTCAAAGGCAATCATACAATAATCAACTTCTTTGGCGTCCCAGTCCATTACTCG
AGAATGATGCGATAAGCTACTACCGATACGTGAAGGGCACCGGCTCTCCTTTGTCACCTTTTAAGGCGGAAATGGTGGATAAGGCTCATTCTCTGAAAGAGGGGACGCTC
AGATATTGTACTCCTAGAGAGGTTGCTAACTTGCATTCCTTTCCGGAAGATTCTCAATTTCCACAGCATATTGGCCTTAGGCAA
Protein sequenceShow/hide protein sequence
MENVGFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFCLAKRRLLSFQRQSYNNQLLWRPSPLLENDAISYYRYVKGTGSPLSPFKAEMVDKAHSLKEGTL
RYCTPREVANLHSFPEDSQFPQHIGLRQ