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Carg03920 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg03920
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionExpansin-like EG45 domain-containing protein
Genome locationCarg_Chr12:2027342..2027874
RNA-Seq ExpressionCarg03920
SyntenyCarg03920
Gene Ontology termsNA
InterPro domainsIPR007112 - Expansin/pollen allergen, DPBB domain
IPR009009 - RlpA-like protein, double-psi beta-barrel domain
IPR036908 - RlpA-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585463.1 EG45-like domain containing protein, partial [Cucurbita argyrosperma subsp. sororia]2.5e-67100Show/hide
Query:  MAVLVVVFFFTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAACGRRYRLRCLSGRNHPCKTDIIEVQVVNFCPKSPCPSS
        MAVLVVVFFFTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAACGRRYRLRCLSGRNHPCKTDIIEVQVVNFCPKSPCPSS
Subjt:  MAVLVVVFFFTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAACGRRYRLRCLSGRNHPCKTDIIEVQVVNFCPKSPCPSS

Query:  FLMSKEAFAAISRLPNARLNVEYIE
        FLMSKEAFAAISRLPNARLNVEYIE
Subjt:  FLMSKEAFAAISRLPNARLNVEYIE

KAG7020381.1 EG45-like domain containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]8.7e-68100Show/hide
Query:  MAVLVVVFFFTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAACGRRYRLRCLSGRNHPCKTDIIEVQVVNFCPKSPCPSS
        MAVLVVVFFFTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAACGRRYRLRCLSGRNHPCKTDIIEVQVVNFCPKSPCPSS
Subjt:  MAVLVVVFFFTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAACGRRYRLRCLSGRNHPCKTDIIEVQVVNFCPKSPCPSS

Query:  FLMSKEAFAAISRLPNARLNVEYIEI
        FLMSKEAFAAISRLPNARLNVEYIEI
Subjt:  FLMSKEAFAAISRLPNARLNVEYIEI

XP_022951412.1 EG45-like domain containing protein [Cucurbita moschata]4.3e-6798.41Show/hide
Query:  MAVLVVVFFFTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAACGRRYRLRCLSGRNHPCKTDIIEVQVVNFCPKSPCPSS
        MA+L+VVFFFTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAACGRRYRLRCLSGRNHPCKTDIIEVQVVNFCPKSPCPSS
Subjt:  MAVLVVVFFFTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAACGRRYRLRCLSGRNHPCKTDIIEVQVVNFCPKSPCPSS

Query:  FLMSKEAFAAISRLPNARLNVEYIEI
        FLMSKEAFAAISRLPNARLNVEYIEI
Subjt:  FLMSKEAFAAISRLPNARLNVEYIEI

XP_023002547.1 EG45-like domain containing protein [Cucurbita maxima]1.9e-6293.5Show/hide
Query:  LVVVFFFTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAACGRRYRLRCLSGRNHPCKTDIIEVQVVNFCPKSPCPSSFLM
        L+VVFFF HISMARGDIG AT YGPPYLPTLCNGNR+DQFPPGNLFVAVNEGLWDNGAACGRRYR+RCLSGRNHPCKTDIIEVQVVN CPKSPCPSSFLM
Subjt:  LVVVFFFTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAACGRRYRLRCLSGRNHPCKTDIIEVQVVNFCPKSPCPSSFLM

Query:  SKEAFAAISRLPNARLNVEYIEI
        SKEAF AISRLPNARLNVEYIEI
Subjt:  SKEAFAAISRLPNARLNVEYIEI

XP_023537855.1 EG45-like domain containing protein [Cucurbita pepo subsp. pepo]1.1e-6597.56Show/hide
Query:  VLVVVFFFTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAACGRRYRLRCLSGRNHPCKTDIIEVQVVNFCPKSPCPSSFL
        ++VVVFFFTH+SMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAACGRRYRLRCLSGRNHPCKTDIIEVQVVNFCPKSPCPSSFL
Subjt:  VLVVVFFFTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAACGRRYRLRCLSGRNHPCKTDIIEVQVVNFCPKSPCPSSFL

Query:  MSKEAFAAISRLPNARLNVEYIE
        MSKEAFAAISRLPNARLNVEYIE
Subjt:  MSKEAFAAISRLPNARLNVEYIE

TrEMBL top hitse value%identityAlignment
A0A1S3BC30 EG45-like domain containing protein5.7e-5783.72Show/hide
Query:  MAVLVVVFF---FTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAACGRRYRLRCLSGRNHPCKTDIIEVQVVNFCPKSPC
        MA+    FF   F H+SMA  DIGTAT YGPPYLPT CNGN ++QFPPGNLFVAVNEGLWDNGAACGRRYRLRCLSGRN PCKTDIIEVQVVNFCPKSPC
Subjt:  MAVLVVVFF---FTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAACGRRYRLRCLSGRNHPCKTDIIEVQVVNFCPKSPC

Query:  PSSFLMSKEAFAAISRLPNARLNVEYIEI
        PSSFLMSKEAF+AISR PNA+LNVEYIEI
Subjt:  PSSFLMSKEAFAAISRLPNARLNVEYIEI

A0A5A7V9U1 EG45-like domain containing protein1.3e-5688.79Show/hide
Query:  FTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAACGRRYRLRCLSGRNHPCKTDIIEVQVVNFCPKSPCPSSFLMSKEAFA
        F H+SMA  DIGTAT YGPPYLPT CNGN ++QFPPGNLFVAVNEGLWDNGAACGRRYRLRCLSGRN PCKTDIIEVQVVNFCPKSPCPSSFLMSKEAF+
Subjt:  FTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAACGRRYRLRCLSGRNHPCKTDIIEVQVVNFCPKSPCPSSFLMSKEAFA

Query:  AISRLPNARLNVEYIE
        AISR PNA+LNVEYIE
Subjt:  AISRLPNARLNVEYIE

A0A6J1BR12 EG45-like domain containing protein1.4e-5891.6Show/hide
Query:  FFFTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAACGRRYRLRCLSGRNHPCKTDIIEVQVVNFCPKSPCPSSFLMSKEA
        FFF HISMA  D+GTATAYGPPYLPTLCNGN V QFPPGNLFVAVNEGLWDNGAACGRRYRLRCLSGRN PCK DIIEVQVVN CPKSPCPSSFLMSKEA
Subjt:  FFFTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAACGRRYRLRCLSGRNHPCKTDIIEVQVVNFCPKSPCPSSFLMSKEA

Query:  FAAISRLPNARLNVEYIEI
        F AISRLPNARLNVEYIEI
Subjt:  FAAISRLPNARLNVEYIEI

A0A6J1GHJ6 EG45-like domain containing protein2.1e-6798.41Show/hide
Query:  MAVLVVVFFFTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAACGRRYRLRCLSGRNHPCKTDIIEVQVVNFCPKSPCPSS
        MA+L+VVFFFTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAACGRRYRLRCLSGRNHPCKTDIIEVQVVNFCPKSPCPSS
Subjt:  MAVLVVVFFFTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAACGRRYRLRCLSGRNHPCKTDIIEVQVVNFCPKSPCPSS

Query:  FLMSKEAFAAISRLPNARLNVEYIEI
        FLMSKEAFAAISRLPNARLNVEYIEI
Subjt:  FLMSKEAFAAISRLPNARLNVEYIEI

A0A6J1KJT8 EG45-like domain containing protein9.1e-6393.5Show/hide
Query:  LVVVFFFTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAACGRRYRLRCLSGRNHPCKTDIIEVQVVNFCPKSPCPSSFLM
        L+VVFFF HISMARGDIG AT YGPPYLPTLCNGNR+DQFPPGNLFVAVNEGLWDNGAACGRRYR+RCLSGRNHPCKTDIIEVQVVN CPKSPCPSSFLM
Subjt:  LVVVFFFTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAACGRRYRLRCLSGRNHPCKTDIIEVQVVNFCPKSPCPSSFLM

Query:  SKEAFAAISRLPNARLNVEYIEI
        SKEAF AISRLPNARLNVEYIEI
Subjt:  SKEAFAAISRLPNARLNVEYIEI

SwissProt top hitse value%identityAlignment
Q9M0C2 Putative EG45-like domain containing protein 14.5e-1132.79Show/hide
Query:  VVVFFFTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAACGRRYRLRCLSGRN---HPCKTDIIEVQVVNFCPKSPCPSSF
        V+VF F+      G     T+Y P Y  T            G +  A ++ LWDNG  CG+ + ++C   RN   HPC    ++V++V+ CP S C S+ 
Subjt:  VVVFFFTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAACGRRYRLRCLSGRN---HPCKTDIIEVQVVNFCPKSPCPSSF

Query:  LMSKEAFAAISRLPNARLNVEY
         +S+EAFA I+      +N++Y
Subjt:  LMSKEAFAAISRLPNARLNVEY

Q9ZP41 EG45-like domain containing protein8.0e-1634.21Show/hide
Query:  SMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAACGRRYRLRCLSGRN----HPCKTDIIEVQVVNFCPKSPCPSSFLMSKEAFA
        S A    GTAT Y PPY+P+ CNG + D    G +  A +  +W+NGA C + +R++C    N    HPC+   + V++V+ CP + C ++  +S+EAF+
Subjt:  SMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAACGRRYRLRCLSGRN----HPCKTDIIEVQVVNFCPKSPCPSSFLMSKEAFA

Query:  AISRLPNARLNVEY
         I+     ++ +E+
Subjt:  AISRLPNARLNVEY

Q9ZV52 EG45-like domain containing protein 29.8e-1433.86Show/hide
Query:  VLVVVFFFTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAACGRRYRLRCLSGR---NHPCKTDIIEVQVVNFCPKSPCPS
        V+++VF      +A    G A  Y PPY  + C G + +      L V V   LW NG ACGRRYR+RC+      +  C    ++V+VV+FC + PC  
Subjt:  VLVVVFFFTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAACGRRYRLRCLSGR---NHPCKTDIIEVQVVNFCPKSPCPS

Query:  SFLMSKEAFAAISRLPNARLNVEYIEI
           +S++AF  I+      + V Y  I
Subjt:  SFLMSKEAFAAISRLPNARLNVEYIEI

Arabidopsis top hitse value%identityAlignment
AT2G18660.1 plant natriuretic peptide A7.0e-1533.86Show/hide
Query:  VLVVVFFFTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAACGRRYRLRCLSGR---NHPCKTDIIEVQVVNFCPKSPCPS
        V+++VF      +A    G A  Y PPY  + C G + +      L V V   LW NG ACGRRYR+RC+      +  C    ++V+VV+FC + PC  
Subjt:  VLVVVFFFTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAACGRRYRLRCLSGR---NHPCKTDIIEVQVVNFCPKSPCPS

Query:  SFLMSKEAFAAISRLPNARLNVEYIEI
           +S++AF  I+      + V Y  I
Subjt:  SFLMSKEAFAAISRLPNARLNVEYIEI

AT4G30380.1 Barwin-related endoglucanase3.2e-1232.79Show/hide
Query:  VVVFFFTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAACGRRYRLRCLSGRN---HPCKTDIIEVQVVNFCPKSPCPSSF
        V+VF F+      G     T+Y P Y  T            G +  A ++ LWDNG  CG+ + ++C   RN   HPC    ++V++V+ CP S C S+ 
Subjt:  VVVFFFTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAACGRRYRLRCLSGRN---HPCKTDIIEVQVVNFCPKSPCPSSF

Query:  LMSKEAFAAISRLPNARLNVEY
         +S+EAFA I+      +N++Y
Subjt:  LMSKEAFAAISRLPNARLNVEY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTCCTCGTCGTCGTCTTCTTCTTCACGCACATTTCCATGGCTCGAGGAGACATTGGCACGGCCACAGCCTATGGCCCTCCATATCTACCCACCCTATGTAATGG
GAACCGCGTCGATCAGTTCCCACCTGGCAACCTCTTCGTGGCAGTGAATGAAGGGCTCTGGGACAACGGCGCTGCTTGCGGTCGACGTTATAGATTAAGATGTTTGAGCG
GACGAAACCACCCATGCAAGACTGATATCATTGAAGTTCAGGTGGTGAACTTCTGCCCCAAGTCCCCGTGCCCCTCTTCCTTTCTCATGTCCAAAGAGGCCTTCGCAGCT
ATCTCTCGCCTCCCCAATGCTAGACTCAACGTCGAGTATATCGAAATATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGTCCTCGTCGTCGTCTTCTTCTTCACGCACATTTCCATGGCTCGAGGAGACATTGGCACGGCCACAGCCTATGGCCCTCCATATCTACCCACCCTATGTAATGG
GAACCGCGTCGATCAGTTCCCACCTGGCAACCTCTTCGTGGCAGTGAATGAAGGGCTCTGGGACAACGGCGCTGCTTGCGGTCGACGTTATAGATTAAGATGTTTGAGCG
GACGAAACCACCCATGCAAGACTGATATCATTGAAGTTCAGGTGGTGAACTTCTGCCCCAAGTCCCCGTGCCCCTCTTCCTTTCTCATGTCCAAAGAGGCCTTCGCAGCT
ATCTCTCGCCTCCCCAATGCTAGACTCAACGTCGAGTATATCGAAATATAA
Protein sequenceShow/hide protein sequence
MAVLVVVFFFTHISMARGDIGTATAYGPPYLPTLCNGNRVDQFPPGNLFVAVNEGLWDNGAACGRRYRLRCLSGRNHPCKTDIIEVQVVNFCPKSPCPSSFLMSKEAFAA
ISRLPNARLNVEYIEI