; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg03937 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg03937
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionnuclear transcription factor Y subunit gamma-like
Genome locationCarg_Chr12:2104386..2104880
RNA-Seq ExpressionCarg03937
SyntenyCarg03937
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585483.1 hypothetical protein SDJN03_18216, partial [Cucurbita argyrosperma subsp. sororia]1.3e-8499.39Show/hide
Query:  MNNETSGPVLRPLPAGGGGGFHSTFFHNHRRSASSRVNISSSPMFHSVRFSLGHRSIAVSNRNSPVSQPCMCSPTNHPGSFRCSLHKNGGSSRHHQMLSV
        MNNETSGPVLRPLPAGGGGGFHSTFFHNHRRSASSRVNISSSPMFHSVRFSLGHRSIAVSNRNSPVSQPCMCSPTNHPGSFRCSLHKNGGSSRHHQMLS 
Subjt:  MNNETSGPVLRPLPAGGGGGFHSTFFHNHRRSASSRVNISSSPMFHSVRFSLGHRSIAVSNRNSPVSQPCMCSPTNHPGSFRCSLHKNGGSSRHHQMLSV

Query:  YSSRRLNMRRSAMTNSLVRIGGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSENHN
        YSSRRLNMRRSAMTNSLVRIGGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSENHN
Subjt:  YSSRRLNMRRSAMTNSLVRIGGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSENHN

KAG6598561.1 Protein MEMO1, partial [Cucurbita argyrosperma subsp. sororia]2.4e-4965.96Show/hide
Query:  MNNETSGPVLRPLPAGG--------------GGGFHST---FFHNHRRSAS-SRVNISSSPMFHSVRFSLGH------RSIAVSNRNSPVSQP---CMCS
        M  ETSGPVLRPLPA G                GF ST   FFHNH RSAS +RVNISS P+  SVRFS+ H      RSIA+SNRNSPVSQP   C CS
Subjt:  MNNETSGPVLRPLPAGG--------------GGGFHST---FFHNHRRSAS-SRVNISSSPMFHSVRFSLGH------RSIAVSNRNSPVSQP---CMCS

Query:  PTNHPGSFRCSLHKNGGSSRHHQMLSVYSSRRLNMRRSAMTNSLVRIGGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSE
        PT HPGSFRCSLH+N G+  HHQ    +SS  LNMRRSAMTNSLVRIGGVEGD V RALTALIRPSSHQ RRRANF+ RPSRLS +S+
Subjt:  PTNHPGSFRCSLHKNGGSSRHHQMLSVYSSRRLNMRRSAMTNSLVRIGGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSE

KAG7020398.1 hypothetical protein SDJN02_17082, partial [Cucurbita argyrosperma subsp. argyrosperma]4.6e-85100Show/hide
Query:  MNNETSGPVLRPLPAGGGGGFHSTFFHNHRRSASSRVNISSSPMFHSVRFSLGHRSIAVSNRNSPVSQPCMCSPTNHPGSFRCSLHKNGGSSRHHQMLSV
        MNNETSGPVLRPLPAGGGGGFHSTFFHNHRRSASSRVNISSSPMFHSVRFSLGHRSIAVSNRNSPVSQPCMCSPTNHPGSFRCSLHKNGGSSRHHQMLSV
Subjt:  MNNETSGPVLRPLPAGGGGGFHSTFFHNHRRSASSRVNISSSPMFHSVRFSLGHRSIAVSNRNSPVSQPCMCSPTNHPGSFRCSLHKNGGSSRHHQMLSV

Query:  YSSRRLNMRRSAMTNSLVRIGGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSENHN
        YSSRRLNMRRSAMTNSLVRIGGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSENHN
Subjt:  YSSRRLNMRRSAMTNSLVRIGGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSENHN

XP_022951456.1 uncharacterized protein LOC111454267 [Cucurbita moschata]3.6e-8297.56Show/hide
Query:  MNNETSGPVLRPLPAGGGGGFHSTFFHNHRRSASSRVNISSSPMFHSVRFSLGHRSIAVSNRNSPVSQPCMCSPTNHPGSFRCSLHKNGGSSRHHQMLSV
        MNNETSGPVLRPLPAGGGGGF+STFFHNHRRSASSRVNISSSPM HSVRFSLGHRSIAVSNRNSPVSQPCMCSPTNHPGSFRCSLHKNGGSSRHHQ LS 
Subjt:  MNNETSGPVLRPLPAGGGGGFHSTFFHNHRRSASSRVNISSSPMFHSVRFSLGHRSIAVSNRNSPVSQPCMCSPTNHPGSFRCSLHKNGGSSRHHQMLSV

Query:  YSSRRLNMRRSAMTNSLVRIGGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSENHN
        YSSRRLNMRRSAMTNSLVRIGGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSENHN
Subjt:  YSSRRLNMRRSAMTNSLVRIGGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSENHN

XP_023547160.1 uncharacterized protein LOC111806049 [Cucurbita pepo subsp. pepo]8.1e-5066.84Show/hide
Query:  MNNETSGPVLRPLPAGG--------------GGGFHST---FFHNHRRSAS-SRVNISSSPMFHSVRFSLGH------RSIAVSNRNSPVSQP---CMCS
        M  ETSGPVLRPLPA G                GF ST   FFHNH RSAS +RVNISS P+  SVRFS+ H      RSIA+SNRNSPVSQP   C CS
Subjt:  MNNETSGPVLRPLPAGG--------------GGGFHST---FFHNHRRSAS-SRVNISSSPMFHSVRFSLGH------RSIAVSNRNSPVSQP---CMCS

Query:  PTNHPGSFRCSLHKNGGSSRHHQMLSVYSSRRLNMRRSAMTNSLVRIGGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMS
        PT HPGSFRCSLH+N G+  HHQ    YSS  LNMRRSAMTNSLVRIGGVEGD V RALTALIRPSSHQ RRRANF+ RPSRLS +S
Subjt:  PTNHPGSFRCSLHKNGGSSRHHQMLSVYSSRRLNMRRSAMTNSLVRIGGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMS

TrEMBL top hitse value%identityAlignment
A0A1S3BC71 nuclear transcription factor Y subunit gamma-like9.1e-4761.42Show/hide
Query:  MNNETSGPVLRPLPAGG------------------GGGF----------HSTFFHNHRRSAS-SRVNISSSPMFHSVRFSLGHRSIA--VSNRNSPVS--
        M  ETSGPVLRP PAGG                    GF          H    HNH RSAS +RVNISS+P+  SVRFS+GHRS +  +SNRNSPVS  
Subjt:  MNNETSGPVLRPLPAGG------------------GGGF----------HSTFFHNHRRSAS-SRVNISSSPMFHSVRFSLGHRSIA--VSNRNSPVS--

Query:  -QPCMCSPTNHPGSFRCSLHKNGGSS--RHHQMLSVYSSRRLNMRRSAMTNSLVRIGGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSE
         +PCMCSPT HPGSFRCSLHK  GS   +H    S YSS  LNMRRSAMTNSLVRIGGVEGD V RALTALIRPSSHQ RRRANF+ +PSRLS MS+
Subjt:  -QPCMCSPTNHPGSFRCSLHKNGGSS--RHHQMLSVYSSRRLNMRRSAMTNSLVRIGGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSE

A0A5A7VCJ2 Nuclear transcription factor Y subunit gamma-like9.1e-4761.42Show/hide
Query:  MNNETSGPVLRPLPAGG------------------GGGF----------HSTFFHNHRRSAS-SRVNISSSPMFHSVRFSLGHRSIA--VSNRNSPVS--
        M  ETSGPVLRP PAGG                    GF          H    HNH RSAS +RVNISS+P+  SVRFS+GHRS +  +SNRNSPVS  
Subjt:  MNNETSGPVLRPLPAGG------------------GGGF----------HSTFFHNHRRSAS-SRVNISSSPMFHSVRFSLGHRSIA--VSNRNSPVS--

Query:  -QPCMCSPTNHPGSFRCSLHKNGGSS--RHHQMLSVYSSRRLNMRRSAMTNSLVRIGGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSE
         +PCMCSPT HPGSFRCSLHK  GS   +H    S YSS  LNMRRSAMTNSLVRIGGVEGD V RALTALIRPSSHQ RRRANF+ +PSRLS MS+
Subjt:  -QPCMCSPTNHPGSFRCSLHKNGGSS--RHHQMLSVYSSRRLNMRRSAMTNSLVRIGGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSE

A0A6J1GHM5 uncharacterized protein LOC1114542671.8e-8297.56Show/hide
Query:  MNNETSGPVLRPLPAGGGGGFHSTFFHNHRRSASSRVNISSSPMFHSVRFSLGHRSIAVSNRNSPVSQPCMCSPTNHPGSFRCSLHKNGGSSRHHQMLSV
        MNNETSGPVLRPLPAGGGGGF+STFFHNHRRSASSRVNISSSPM HSVRFSLGHRSIAVSNRNSPVSQPCMCSPTNHPGSFRCSLHKNGGSSRHHQ LS 
Subjt:  MNNETSGPVLRPLPAGGGGGFHSTFFHNHRRSASSRVNISSSPMFHSVRFSLGHRSIAVSNRNSPVSQPCMCSPTNHPGSFRCSLHKNGGSSRHHQMLSV

Query:  YSSRRLNMRRSAMTNSLVRIGGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSENHN
        YSSRRLNMRRSAMTNSLVRIGGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSENHN
Subjt:  YSSRRLNMRRSAMTNSLVRIGGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSENHN

A0A6J1HGM5 uncharacterized protein LOC1114627802.6e-4965.96Show/hide
Query:  MNNETSGPVLRPLPAGG--------------GGGFHST---FFHNHRRSAS-SRVNISSSPMFHSVRFSLGH------RSIAVSNRNSPVSQP---CMCS
        M  ETSGPVLRPLPA G                GF ST   FFHN  RSAS +RVNISS P+  SVRFS+ H      RSIA+SNRNSPVSQP   C CS
Subjt:  MNNETSGPVLRPLPAGG--------------GGGFHST---FFHNHRRSAS-SRVNISSSPMFHSVRFSLGH------RSIAVSNRNSPVSQP---CMCS

Query:  PTNHPGSFRCSLHKNGGSSRHHQMLSVYSSRRLNMRRSAMTNSLVRIGGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSE
        PT HPGSFRCSLH+N G+  HHQ    YSS  LNMRRSAMTNSLVRIGGVEGD V RALTALIRPSSHQ RRRANF+ RPSRLS +S+
Subjt:  PTNHPGSFRCSLHKNGGSSRHHQMLSVYSSRRLNMRRSAMTNSLVRIGGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSE

A0A6J1K7C8 uncharacterized protein LOC1114918132.6e-4967.78Show/hide
Query:  MNNETSGPVLRPLPAGG------GGGFHST---FFHNHRRSAS-SRVNISSSPMFHSVRFSLGH------RSIAVSNRNSPVSQP---CMCSPTNHPGSF
        M  ETSGPVLRPLPA G        GF ST   FFHNH R+AS +RVNISSSP+  SVRFS+ H      RSI +SNRNSPVS P   C CSPT HPGSF
Subjt:  MNNETSGPVLRPLPAGG------GGGFHST---FFHNHRRSAS-SRVNISSSPMFHSVRFSLGH------RSIAVSNRNSPVSQP---CMCSPTNHPGSF

Query:  RCSLHKNGGSSRHHQMLSVYSSRRLNMRRSAMTNSLVRIGGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSE
        RCSLH+N G+  HHQ    YSS  LNMRRSAM NSLVRIGGVEGD V RALTALIRPSSHQ RRRANF+ RPSRLS +S+
Subjt:  RCSLHKNGGSSRHHQMLSVYSSRRLNMRRSAMTNSLVRIGGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G11090.1 serine-rich protein-related2.3e-3452.02Show/hide
Query:  NETSGPVLRPLPAGGGGGFHSTFFHNHRRSAS-SRVNI-SSSPMFHSVRFSLGHRSIAVSNR------------NSPVSQPCMCSPTNHPGSFRCSLHKN
        + TS     P  A      H    H+H RSAS +RVN+ ++ PM  S R+SL  RSI+ +N+            N  +S+ CMCSPT HPGSFRCSLHKN
Subjt:  NETSGPVLRPLPAGGGGGFHSTFFHNHRRSAS-SRVNI-SSSPMFHSVRFSLGHRSIAVSNR------------NSPVSQPCMCSPTNHPGSFRCSLHKN

Query:  GGSSRHHQMLSVYSSRRLNMRRSAMTNSLVRIGGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSE
          ++ H Q  + Y++  LNMRRSAMTNSLVRIGGVEG+ V RALT LIRPSSH  +RRA +Q RPSRLS M++
Subjt:  GGSSRHHQMLSVYSSRRLNMRRSAMTNSLVRIGGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSE

AT5G20370.1 serine-rich protein-related2.9e-1334.34Show/hide
Query:  TSGPVLRPLPAGGGGGFHSTFFHNHRRSASS--RVNISSSPMFHSVRFSLGHRSIAVSNRNSPVSQPCMCSPTNHPGSFRCSLHKNGGSSRHHQMLSVYS
        +S  VLRPL        H+   H+HR+ + S    N++    F+S   S+   S+   + N    + C+CSPT HPGSFRCS H+     +   + S   
Subjt:  TSGPVLRPLPAGGGGGFHSTFFHNHRRSASS--RVNISSSPMFHSVRFSLGHRSIAVSNRNSPVSQPCMCSPTNHPGSFRCSLHKNGGSSRHHQMLSVYS

Query:  SRR------------LNMRRSAMTNSLVRIGGVEGDLVNRALTA-LIRPSSHQQRRRANFQSRPSR
         R             LN+R+ A+ NSL +IG VE +   R+L A L +PSS    RR  F+ R SR
Subjt:  SRR------------LNMRRSAMTNSLVRIGGVEGDLVNRALTA-LIRPSSHQQRRRANFQSRPSR

AT5G25280.1 serine-rich protein-related8.1e-3254Show/hide
Query:  HNHRRSASSRVNI-SSSPMFHSVRFSLGHRSIAVSNRNSPVS--------------QPCMCSPTNHPGSFRCSLHKNGGSSRHHQMLSVYSSRRLNMRRS
        H HR ++ +RVN+ +S+PM  S R+S+ +RSI+  NR+  VS              + CMCSPT HPGSFRCSLHKN  ++ H Q  + Y++  LNMRRS
Subjt:  HNHRRSASSRVNI-SSSPMFHSVRFSLGHRSIAVSNRNSPVS--------------QPCMCSPTNHPGSFRCSLHKNGGSSRHHQMLSVYSSRRLNMRRS

Query:  AMTNSLVRIGGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSE
        AMTNSLVRIGGVEG+ V RALT LIRPSSHQ +RR+ ++ R SRL++MS+
Subjt:  AMTNSLVRIGGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSE

AT5G25280.2 serine-rich protein-related8.1e-3254Show/hide
Query:  HNHRRSASSRVNI-SSSPMFHSVRFSLGHRSIAVSNRNSPVS--------------QPCMCSPTNHPGSFRCSLHKNGGSSRHHQMLSVYSSRRLNMRRS
        H HR ++ +RVN+ +S+PM  S R+S+ +RSI+  NR+  VS              + CMCSPT HPGSFRCSLHKN  ++ H Q  + Y++  LNMRRS
Subjt:  HNHRRSASSRVNI-SSSPMFHSVRFSLGHRSIAVSNRNSPVS--------------QPCMCSPTNHPGSFRCSLHKNGGSSRHHQMLSVYSSRRLNMRRS

Query:  AMTNSLVRIGGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSE
        AMTNSLVRIGGVEG+ V RALT LIRPSSHQ +RR+ ++ R SRL++MS+
Subjt:  AMTNSLVRIGGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAACGAAACAAGCGGCCCTGTTCTCCGGCCACTTCCCGCCGGCGGCGGCGGCGGATTTCACTCCACGTTCTTCCACAACCACCGTCGATCTGCTTCTTCTCGAGT
GAACATCTCTTCCTCTCCCATGTTTCACTCTGTTCGATTTTCCCTAGGTCACCGGTCCATCGCCGTCTCAAATCGGAACTCGCCGGTTTCTCAGCCGTGTATGTGTTCGC
CGACGAACCACCCCGGCTCCTTCCGGTGCAGTCTGCATAAAAATGGCGGCAGTAGCCGACACCATCAGATGTTGTCGGTGTATTCGTCGAGGCGTTTGAATATGCGGCGG
TCTGCAATGACGAACTCGCTTGTGAGAATCGGTGGCGTTGAAGGAGACTTGGTCAACCGAGCGTTGACTGCTTTGATTCGACCTTCTTCGCACCAACAGCGACGGAGAGC
CAATTTTCAGTCGCGCCCCAGCCGGCTTTCGGCCATGTCCGAAAATCATAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACAACGAAACAAGCGGCCCTGTTCTCCGGCCACTTCCCGCCGGCGGCGGCGGCGGATTTCACTCCACGTTCTTCCACAACCACCGTCGATCTGCTTCTTCTCGAGT
GAACATCTCTTCCTCTCCCATGTTTCACTCTGTTCGATTTTCCCTAGGTCACCGGTCCATCGCCGTCTCAAATCGGAACTCGCCGGTTTCTCAGCCGTGTATGTGTTCGC
CGACGAACCACCCCGGCTCCTTCCGGTGCAGTCTGCATAAAAATGGCGGCAGTAGCCGACACCATCAGATGTTGTCGGTGTATTCGTCGAGGCGTTTGAATATGCGGCGG
TCTGCAATGACGAACTCGCTTGTGAGAATCGGTGGCGTTGAAGGAGACTTGGTCAACCGAGCGTTGACTGCTTTGATTCGACCTTCTTCGCACCAACAGCGACGGAGAGC
CAATTTTCAGTCGCGCCCCAGCCGGCTTTCGGCCATGTCCGAAAATCATAATTGA
Protein sequenceShow/hide protein sequence
MNNETSGPVLRPLPAGGGGGFHSTFFHNHRRSASSRVNISSSPMFHSVRFSLGHRSIAVSNRNSPVSQPCMCSPTNHPGSFRCSLHKNGGSSRHHQMLSVYSSRRLNMRR
SAMTNSLVRIGGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSENHN