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Carg03965 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg03965
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTransmembrane protein
Genome locationCarg_Chr12:2270391..2273667
RNA-Seq ExpressionCarg03965
SyntenyCarg03965
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EYU22029.1 hypothetical protein MIMGU_mgv11b017472mg [Erythranthe guttata]2.1e-1272.55Show/hide
Query:  MANEQRSSIGPWFLEAIPLVIVLLIAAHVFALVYWIYRLATQKQPPRTKTH
        MAN Q++SI PWFLE +PL++V LI AHV ALVYWIYRLAT+KQP RTK H
Subjt:  MANEQRSSIGPWFLEAIPLVIVLLIAAHVFALVYWIYRLATQKQPPRTKTH
KAG7020426.1 hypothetical protein SDJN02_17110 [Cucurbita argyrosperma subsp. argyrosperma]1.0e-19100Show/hide
Query:  MANEQRSSIGPWFLEAIPLVIVLLIAAHVFALVYWIYRLATQKQPPRTKTH
        MANEQRSSIGPWFLEAIPLVIVLLIAAHVFALVYWIYRLATQKQPPRTKTH
Subjt:  MANEQRSSIGPWFLEAIPLVIVLLIAAHVFALVYWIYRLATQKQPPRTKTH
KAG7029467.1 hypothetical protein SDJN02_07806 [Cucurbita argyrosperma subsp. argyrosperma]1.0e-1478.43Show/hide
Query:  MANEQRSSIGPWFLEAIPLVIVLLIAAHVFALVYWIYRLATQKQPPRTKTH
        MANE+RSS GPW LEA+P ++VLLIAAHVFALVYWIY+LA QKQPPR K H
Subjt:  MANEQRSSIGPWFLEAIPLVIVLLIAAHVFALVYWIYRLATQKQPPRTKTH
PON73170.1 Transmembrane protein [Parasponia andersonii]6.1e-1270.59Show/hide
Query:  MANEQRSSIGPWFLEAIPLVIVLLIAAHVFALVYWIYRLATQKQPPRTKTH
        MANEQ S   PW L+ +PL++VLLIA HVFALVYWIYRLAT+KQP R K H
Subjt:  MANEQRSSIGPWFLEAIPLVIVLLIAAHVFALVYWIYRLATQKQPPRTKTH
PON94578.1 Transmembrane protein [Trema orientale]1.2e-1274.51Show/hide
Query:  MANEQRSSIGPWFLEAIPLVIVLLIAAHVFALVYWIYRLATQKQPPRTKTH
        MANEQ S   PW L+A+PL++VLLIAAHVFALVYWIYRLAT+KQP R K H
Subjt:  MANEQRSSIGPWFLEAIPLVIVLLIAAHVFALVYWIYRLATQKQPPRTKTH
TrEMBL top hitse value%identityAlignment
A0A022Q329 Uncharacterized protein1.0e-1272.55Show/hide
Query:  MANEQRSSIGPWFLEAIPLVIVLLIAAHVFALVYWIYRLATQKQPPRTKTH
        MAN Q++SI PWFLE +PL++V LI AHV ALVYWIYRLAT+KQP RTK H
Subjt:  MANEQRSSIGPWFLEAIPLVIVLLIAAHVFALVYWIYRLATQKQPPRTKTH
A0A2N9FKX1 Uncharacterized protein1.0e-1273.08Show/hide
Query:  MANEQR-SSIGPWFLEAIPLVIVLLIAAHVFALVYWIYRLATQKQPPRTKTH
        MANEQ+ SS+ PWFL+ +PL++V+LIAAHVFALVYWIYRLAT+KQP R K H
Subjt:  MANEQR-SSIGPWFLEAIPLVIVLLIAAHVFALVYWIYRLATQKQPPRTKTH
A0A2P5DIT2 Transmembrane protein2.9e-1270.59Show/hide
Query:  MANEQRSSIGPWFLEAIPLVIVLLIAAHVFALVYWIYRLATQKQPPRTKTH
        MANEQ S   PW L+ +PL++VLLIA HVFALVYWIYRLAT+KQP R K H
Subjt:  MANEQRSSIGPWFLEAIPLVIVLLIAAHVFALVYWIYRLATQKQPPRTKTH
A0A2P5F9W8 Transmembrane protein5.9e-1374.51Show/hide
Query:  MANEQRSSIGPWFLEAIPLVIVLLIAAHVFALVYWIYRLATQKQPPRTKTH
        MANEQ S   PW L+A+PL++VLLIAAHVFALVYWIYRLAT+KQP R K H
Subjt:  MANEQRSSIGPWFLEAIPLVIVLLIAAHVFALVYWIYRLATQKQPPRTKTH
V4UGZ6 Uncharacterized protein5.0e-1272.55Show/hide
Query:  MANEQRSSIGPWFLEAIPLVIVLLIAAHVFALVYWIYRLATQKQPPRTKTH
        MANEQ  ++ PWFL+ +PL++VLLIAAHVFALVYWIYRLAT+KQP R K H
Subjt:  MANEQRSSIGPWFLEAIPLVIVLLIAAHVFALVYWIYRLATQKQPPRTKTH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G10745.1 unknown protein1.1e-0856.6Show/hide
Query:  MANEQRSSIGPWFLEAIPLVIVLLIAAHVFALVYWIYRLATQK--QPPRTKTH
        MA EQ   + PWFL+ +P ++VLL AAHV AL YWIYRLAT +  Q  R K H
Subjt:  MANEQRSSIGPWFLEAIPLVIVLLIAAHVFALVYWIYRLATQK--QPPRTKTH
AT5G24980.1 unknown protein5.9e-0552.78Show/hide
Query:  LEAIPLVIVLLIAAHVFALVYWIYRLATQKQPPRTK
        ++ +P ++V L A HV ALVYWIYRLA+ + P R K
Subjt:  LEAIPLVIVLLIAAHVFALVYWIYRLATQKQPPRTK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAACGAGCAACGGTCATCGATAGGGCCCTGGTTCCTCGAAGCGATACCCTTAGTTATTGTTCTTCTCATAGCAGCTCACGTCTTCGCTTTGGTGTATTGGATTTA
TAGGTTAGCGACTCAAAAACAACCTCCCAGGACGAAGACTCACTGA
mRNA sequenceShow/hide mRNA sequence
GAGGTAAATTTGTAAAATCCTCGATTTCGGTTTTGTATTGTTCATTCCTTCGGTCTCCTCACCGATCTTTCTCCGGCGAAAATGGCGAACGAGCAACGGTCATCGATAGG
GCCCTGGTTCCTCGAAGCGATACCCTTAGTTATTGTTCTTCTCATAGCAGCTCACGTCTTCGCTTTGGTGTATTGGATTTATAGGTTAGCGACTCAAAAACAACCTCCCA
GGACGAAGACTCACTGATTACTCTAAGGCAGATCCCAGGAATTATGACCTCAATAGATGCTTTTTTCACCATTGGCGTTTACCATGTCGAAGGACGAACGTATTAGTACA
TTACTGCGGTAAATTTCTTTTTCTTTAGCTATGAAATCCTGAGTGTTTCGTTAGAAGTTTTATTCCTGTAGTATGAGGAAACCATATGCTAGTTTCTTTTTGAAAACAGA
GGAAACTTTCTGCTGCTCGTGTTTTTGTTTTCTTTACTCGTTTGATTTTACTAATCTAATTCTAAGAAAATTCTGAGAAAATGGGAGGATTTCACCCGGAGCTGGTTGCT
TCCTCTTGGTATCAATTCTAAAGATAGGTTGATATTAGTTTCATCACATTTTTGTATCAATGTGGTAATCAGTTCGACTCGGCCGGGTTTGGAGGTTTAATCAAAAGCAA
AACCAATTGAATCTAGAGAAGTATTAAGTCGAGAATCTCTCATTACCCG
Protein sequenceShow/hide protein sequence
MANEQRSSIGPWFLEAIPLVIVLLIAAHVFALVYWIYRLATQKQPPRTKTH