; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg03984 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg03984
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionSec-independent protein translocase protein TATC
Genome locationCarg_Chr12:2404860..2405429
RNA-Seq ExpressionCarg03984
SyntenyCarg03984
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585532.1 hypothetical protein SDJN03_18265, partial [Cucurbita argyrosperma subsp. sororia]1.7e-5466.84Show/hide
Query:  MEAVLIPHNFSP-------AAPAVTFYSHRRRHRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCRELPVEMTAEALIVD
        MEAVLIPHNFS         A AV        +R         FPL RR                           K S+   +  ELPVEMTAEALIVD
Subjt:  MEAVLIPHNFSP-------AAPAVTFYSHRRRHRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCRELPVEMTAEALIVD

Query:  STNRMGPEPSHVPKDLWVVLGLRLPPPSPPPWEGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRKMNCNVQAAAGIDAGATDNLRRLLRLR
        STNRMGPEPSHVPKDLWVVLGLRLPPPSPPPWEGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRK+NCNVQAAAGIDAGATDNLRRLLRLR
Subjt:  STNRMGPEPSHVPKDLWVVLGLRLPPPSPPPWEGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRKMNCNVQAAAGIDAGATDNLRRLLRLR

KAG7020445.1 hypothetical protein SDJN02_17129, partial [Cucurbita argyrosperma subsp. argyrosperma]8.1e-102100Show/hide
Query:  MEAVLIPHNFSPAAPAVTFYSHRRRHRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCRELPVEMTAEALIVDSTNRMGP
        MEAVLIPHNFSPAAPAVTFYSHRRRHRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCRELPVEMTAEALIVDSTNRMGP
Subjt:  MEAVLIPHNFSPAAPAVTFYSHRRRHRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCRELPVEMTAEALIVDSTNRMGP

Query:  EPSHVPKDLWVVLGLRLPPPSPPPWEGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRKMNCNVQAAAGIDAGATDNLRRLLRLR
        EPSHVPKDLWVVLGLRLPPPSPPPWEGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRKMNCNVQAAAGIDAGATDNLRRLLRLR
Subjt:  EPSHVPKDLWVVLGLRLPPPSPPPWEGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRKMNCNVQAAAGIDAGATDNLRRLLRLR

XP_022951686.1 uncharacterized protein LOC111454434 [Cucurbita moschata]4.0e-9395.24Show/hide
Query:  MEAVLIPHNFSPAAPAVTFYSHRRRHRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCRELPVEMTAEALIVDSTNRMGP
        MEAVLIPHNFSPAAPAVTFYS    HRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCRELPVEMTAEALIVDSTNRMGP
Subjt:  MEAVLIPHNFSPAAPAVTFYSHRRRHRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCRELPVEMTAEALIVDSTNRMGP

Query:  EPSHVPKDLWVVLGLRLPPPSPPPWEGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRKMNCNVQAAAGIDAGATDNLRRLLRLR
        EPSHVPKDL VVLGLRLPPPS PP EGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRK+NCNV+AAAGIDAGATDNLRRLLRLR
Subjt:  EPSHVPKDLWVVLGLRLPPPSPPPWEGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRKMNCNVQAAAGIDAGATDNLRRLLRLR

XP_023002514.1 uncharacterized protein LOC111496332 [Cucurbita maxima]1.9e-9091.53Show/hide
Query:  MEAVLIPHNFSPAAPAVTFYSHRRRHRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCRELPVEMTAEALIVDSTNRMGP
        MEAVLIPHNFSPAAPAVTFYS    HRRRHRRQPPRFPLPRRSFPPS AEAQPSC PKGVRFRDQSLAPKKSKSIKRCRELPVEMTAEALIVDSTNR+GP
Subjt:  MEAVLIPHNFSPAAPAVTFYSHRRRHRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCRELPVEMTAEALIVDSTNRMGP

Query:  EPSHVPKDLWVVLGLRLPPPSPPPWEGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRKMNCNVQAAAGIDAGATDNLRRLLRLR
        EPSHVPKDLWVVLGLRLPPP P PWE SRSLGVAAEIEFSGSAF+VSPPPSSVPLPNF LMRK+NCNV+AAAGID GAT+NLRRLLRLR
Subjt:  EPSHVPKDLWVVLGLRLPPPSPPPWEGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRKMNCNVQAAAGIDAGATDNLRRLLRLR

XP_023538239.1 uncharacterized protein LOC111799074 [Cucurbita pepo subsp. pepo]4.1e-9896.3Show/hide
Query:  MEAVLIPHNFSPAAPAVTFYSHRRRHRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCRELPVEMTAEALIVDSTNRMGP
        MEAVLIPHNFSPAAPAVTFYSHRRRHRRRHRRQPPRFP PRRSFPPSAAE+QPSCRPKGVRFRDQSLAPKK KSIKRCRELPVEMTAEALIVDSTNRMGP
Subjt:  MEAVLIPHNFSPAAPAVTFYSHRRRHRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCRELPVEMTAEALIVDSTNRMGP

Query:  EPSHVPKDLWVVLGLRLPPPSPPPWEGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRKMNCNVQAAAGIDAGATDNLRRLLRLR
        EPSHVPKDLWVVLGLRLPPP PPPWEGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNF LMRK+NCNV+AAAGIDAGATDNLRRLLRLR
Subjt:  EPSHVPKDLWVVLGLRLPPPSPPPWEGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRKMNCNVQAAAGIDAGATDNLRRLLRLR

TrEMBL top hitse value%identityAlignment
A0A0A0LN70 Uncharacterized protein3.7e-4458.46Show/hide
Query:  PHNFSPA----------APAVTFYSHRRRHRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCRELP-VEMTAEALIVDST
        P NFSPA           P +++ S R+       +QPP  PLPRR  PPS   A  S RPK + FRDQSL PKKSK IKR R  P  + T E +IVDST
Subjt:  PHNFSPA----------APAVTFYSHRRRHRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCRELP-VEMTAEALIVDST

Query:  NRMGPEPSHVPKDLWVVLGLRLPPPSPPPWEGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRK-MNCNVQAAAGIDAGATDNLRRLLRLR
        NR+GPEPSHVPKDL  +LGLR   PS P  E +RS   AAEIEFSGSA++ SPPPSSVPLP F L RK + CNV+ A+G+DAGATDNLRRLLR+R
Subjt:  NRMGPEPSHVPKDLWVVLGLRLPPPSPPPWEGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRK-MNCNVQAAAGIDAGATDNLRRLLRLR

A0A6J1GI76 uncharacterized protein LOC1114544341.9e-9395.24Show/hide
Query:  MEAVLIPHNFSPAAPAVTFYSHRRRHRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCRELPVEMTAEALIVDSTNRMGP
        MEAVLIPHNFSPAAPAVTFYS    HRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCRELPVEMTAEALIVDSTNRMGP
Subjt:  MEAVLIPHNFSPAAPAVTFYSHRRRHRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCRELPVEMTAEALIVDSTNRMGP

Query:  EPSHVPKDLWVVLGLRLPPPSPPPWEGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRKMNCNVQAAAGIDAGATDNLRRLLRLR
        EPSHVPKDL VVLGLRLPPPS PP EGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRK+NCNV+AAAGIDAGATDNLRRLLRLR
Subjt:  EPSHVPKDLWVVLGLRLPPPSPPPWEGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRKMNCNVQAAAGIDAGATDNLRRLLRLR

A0A6J1HFM4 uncharacterized protein LOC1114630196.3e-5261.61Show/hide
Query:  MEAVLIP-----------HNFSPAA----------PAVTFYSHRRRHRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCR
        ME VLIP            NF PA           PAV  YSHR       R+QPP  PLPRR FPP+A  A PSCRPKG + RDQSL PKKSK IKR R
Subjt:  MEAVLIP-----------HNFSPAA----------PAVTFYSHRRRHRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCR

Query:  ELP-VEMTAEALIVDSTNRMGPEPSHVPKDLWVVLGLRLPPPSPPPWEGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRKMNCNVQAAAGIDAGA
          P ++ TAE +IVDSTNR+GPEPSHVPKDLW VLGLR    S PP EG R      E EFSGSAF VSPPPSSVPLP F L R+M+CNV+ AAG+DAGA
Subjt:  ELP-VEMTAEALIVDSTNRMGPEPSHVPKDLWVVLGLRLPPPSPPPWEGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRKMNCNVQAAAGIDAGA

Query:  TDNLRRLLRLR
        TDNLRRLLRLR
Subjt:  TDNLRRLLRLR

A0A6J1KEH8 uncharacterized protein LOC1114925081.3e-5261.61Show/hide
Query:  MEAVLIP-----------HNFSPAA----------PAVTFYSHRRRHRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCR
        MEAVLIP            NFSPA           PAV  YSH      RH +QPP  PLP R FPP+A    PSCRPKG + RDQSL PKKSK IKR R
Subjt:  MEAVLIP-----------HNFSPAA----------PAVTFYSHRRRHRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCR

Query:  ELP-VEMTAEALIVDSTNRMGPEPSHVPKDLWVVLGLRLPPPSPPPWEGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRKMNCNVQAAAGIDAGA
          P ++ TAE +IVDSTNR+GPEPSHVPKDLW VLGLR    S PP EG RS     E EFSGSAF VSPPPSSVPLP F L R+++CNV+ AAG+DAGA
Subjt:  ELP-VEMTAEALIVDSTNRMGPEPSHVPKDLWVVLGLRLPPPSPPPWEGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRKMNCNVQAAAGIDAGA

Query:  TDNLRRLLRLR
        TDNLRRLLRLR
Subjt:  TDNLRRLLRLR

A0A6J1KQN3 uncharacterized protein LOC1114963329.0e-9191.53Show/hide
Query:  MEAVLIPHNFSPAAPAVTFYSHRRRHRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCRELPVEMTAEALIVDSTNRMGP
        MEAVLIPHNFSPAAPAVTFYS    HRRRHRRQPPRFPLPRRSFPPS AEAQPSC PKGVRFRDQSLAPKKSKSIKRCRELPVEMTAEALIVDSTNR+GP
Subjt:  MEAVLIPHNFSPAAPAVTFYSHRRRHRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCRELPVEMTAEALIVDSTNRMGP

Query:  EPSHVPKDLWVVLGLRLPPPSPPPWEGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRKMNCNVQAAAGIDAGATDNLRRLLRLR
        EPSHVPKDLWVVLGLRLPPP P PWE SRSLGVAAEIEFSGSAF+VSPPPSSVPLPNF LMRK+NCNV+AAAGID GAT+NLRRLLRLR
Subjt:  EPSHVPKDLWVVLGLRLPPPSPPPWEGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRKMNCNVQAAAGIDAGATDNLRRLLRLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G20070.1 unknown protein6.1e-0754.55Show/hide
Query:  VSPPPSSVPLPNFPLMRKMNCNVQAAAGIDAGATDNLRRLLRLR
        +SPPPSS+P+P F +  K+ CNV+AA   D  AT+N+RR+L+LR
Subjt:  VSPPPSSVPLPNFPLMRKMNCNVQAAAGIDAGATDNLRRLLRLR

AT3G21570.1 unknown protein4.9e-0444.83Show/hide
Query:  VAAEIEFSGSA-FNVSPPPSSVPLPNFPLMRKMNCNVQAAAGIDAGATDNLRRLLRLR
        V+A+  ++GS+ F VSP PSS+PLP+F   +K   +      ID  A+ +LRRLLRL+
Subjt:  VAAEIEFSGSA-FNVSPPPSSVPLPNFPLMRKMNCNVQAAAGIDAGATDNLRRLLRLR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCGGTTTTGATTCCCCATAATTTCTCTCCGGCCGCCCCGGCTGTCACGTTTTATAGCCATCGCCGTCGCCATCGCCGTCGCCATCGCCGGCAACCGCCTCGCTT
CCCTCTGCCCCGTCGTTCATTTCCCCCTTCAGCGGCGGAAGCCCAGCCGTCGTGCCGCCCAAAGGGTGTGAGATTCAGAGACCAATCTCTTGCCCCAAAGAAATCAAAAT
CAATTAAACGATGCAGAGAGCTGCCGGTTGAGATGACGGCGGAGGCTTTGATCGTTGATTCCACAAATCGAATGGGGCCGGAGCCGAGCCATGTTCCTAAAGATTTATGG
GTCGTTTTAGGATTACGTTTGCCGCCGCCGTCGCCACCGCCCTGGGAAGGTAGCAGGAGTTTGGGGGTGGCGGCAGAGATTGAATTTTCTGGTTCGGCGTTTAACGTTTC
GCCGCCGCCGAGTAGCGTGCCGCTTCCGAATTTCCCTCTGATGCGGAAGATGAATTGTAATGTACAGGCCGCTGCCGGAATTGACGCCGGAGCCACCGACAATCTCCGGC
GACTTCTACGCCTCCGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGCGGTTTTGATTCCCCATAATTTCTCTCCGGCCGCCCCGGCTGTCACGTTTTATAGCCATCGCCGTCGCCATCGCCGTCGCCATCGCCGGCAACCGCCTCGCTT
CCCTCTGCCCCGTCGTTCATTTCCCCCTTCAGCGGCGGAAGCCCAGCCGTCGTGCCGCCCAAAGGGTGTGAGATTCAGAGACCAATCTCTTGCCCCAAAGAAATCAAAAT
CAATTAAACGATGCAGAGAGCTGCCGGTTGAGATGACGGCGGAGGCTTTGATCGTTGATTCCACAAATCGAATGGGGCCGGAGCCGAGCCATGTTCCTAAAGATTTATGG
GTCGTTTTAGGATTACGTTTGCCGCCGCCGTCGCCACCGCCCTGGGAAGGTAGCAGGAGTTTGGGGGTGGCGGCAGAGATTGAATTTTCTGGTTCGGCGTTTAACGTTTC
GCCGCCGCCGAGTAGCGTGCCGCTTCCGAATTTCCCTCTGATGCGGAAGATGAATTGTAATGTACAGGCCGCTGCCGGAATTGACGCCGGAGCCACCGACAATCTCCGGC
GACTTCTACGCCTCCGATGA
Protein sequenceShow/hide protein sequence
MEAVLIPHNFSPAAPAVTFYSHRRRHRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCRELPVEMTAEALIVDSTNRMGPEPSHVPKDLW
VVLGLRLPPPSPPPWEGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRKMNCNVQAAAGIDAGATDNLRRLLRLR