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Carg03994 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg03994
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTransmembrane protein
Genome locationCarg_Chr12:2462800..2463228
RNA-Seq ExpressionCarg03994
SyntenyCarg03994
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598502.1 hypothetical protein SDJN03_08280, partial [Cucurbita argyrosperma subsp. sororia]4.7e-6286.62Show/hide
Query:  MGWLIRERRGPSWKQGWAEQALASIAPPPRPLLAVLGILVILLSVSSYSSYRSQVKRTKVNFKIFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV
        MGWLIRERRGP+WKQGWAEQA+ASI PPP+PLLA+LGILVILLSVSS+SS+RSQVK T++NFK+FFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV
Subjt:  MGWLIRERRGPSWKQGWAEQALASIAPPPRPLLAVLGILVILLSVSSYSSYRSQVKRTKVNFKIFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV

Query:  AEGTAASPWGAAALLVVLLVLISYQPYFHSKWFPSIWRPYYY
         + T ASP G A LLVVLLVLISYQPYFHSKWFP+IWRPYYY
Subjt:  AEGTAASPWGAAALLVVLLVLISYQPYFHSKWFPSIWRPYYY

KAG7020455.1 hypothetical protein SDJN02_17139, partial [Cucurbita argyrosperma subsp. argyrosperma]3.8e-72100Show/hide
Query:  MGWLIRERRGPSWKQGWAEQALASIAPPPRPLLAVLGILVILLSVSSYSSYRSQVKRTKVNFKIFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV
        MGWLIRERRGPSWKQGWAEQALASIAPPPRPLLAVLGILVILLSVSSYSSYRSQVKRTKVNFKIFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV
Subjt:  MGWLIRERRGPSWKQGWAEQALASIAPPPRPLLAVLGILVILLSVSSYSSYRSQVKRTKVNFKIFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV

Query:  AEGTAASPWGAAALLVVLLVLISYQPYFHSKWFPSIWRPYYY
        AEGTAASPWGAAALLVVLLVLISYQPYFHSKWFPSIWRPYYY
Subjt:  AEGTAASPWGAAALLVVLLVLISYQPYFHSKWFPSIWRPYYY

KAG7029438.1 hypothetical protein SDJN02_07777, partial [Cucurbita argyrosperma subsp. argyrosperma]4.0e-6185.92Show/hide
Query:  MGWLIRERRGPSWKQGWAEQALASIAPPPRPLLAVLGILVILLSVSSYSSYRSQVKRTKVNFKIFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV
        MGWLIRERRGP+WKQGWAEQA+ASI PPP+PLLA+LGILVILLSVSS+S++RSQVK T +NFK+FFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV
Subjt:  MGWLIRERRGPSWKQGWAEQALASIAPPPRPLLAVLGILVILLSVSSYSSYRSQVKRTKVNFKIFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV

Query:  AEGTAASPWGAAALLVVLLVLISYQPYFHSKWFPSIWRPYYY
         + T ASP G A LLVVLLVLISYQPYFHSKWFP+IWRPYYY
Subjt:  AEGTAASPWGAAALLVVLLVLISYQPYFHSKWFPSIWRPYYY

XP_031737284.1 uncharacterized protein LOC116402215 [Cucumis sativus]2.4e-6690.21Show/hide
Query:  MGWLIRERRGPSWKQGWAEQALASIAPPPRPLLAVLGILVILLSVSSYSSYRSQVKRTKVNFKIFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV
        MGWLIRERRGP+WKQGWAEQAL+SI PPPRPLLA+LGILVILLSVSSYSSYRSQVK+T++NFK+FFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV
Subjt:  MGWLIRERRGPSWKQGWAEQALASIAPPPRPLLAVLGILVILLSVSSYSSYRSQVKRTKVNFKIFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV

Query:  AEGTA-ASPWGAAALLVVLLVLISYQPYFHSKWFPSIWRPYYY
         EG A ASPWGAA LLVVLLVL+SYQPYFHSKWFP+IWRPYYY
Subjt:  AEGTA-ASPWGAAALLVVLLVLISYQPYFHSKWFPSIWRPYYY

XP_041018444.1 uncharacterized protein LOC121260573 [Juglans microcarpa x Juglans regia]6.6e-4055Show/hide
Query:  MGWLIRERRGPSWKQGWAEQALASIAPPPRPLLAVLGILVILLSVSSYSSYRSQVKRTKVNFKIFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV
        MGW +RERRGP+WK GW EQ LASI+PPP PL+A+ GI+V+LL ++SY++YRSQ+++T + FK+F  LLP++ +F+ +SI +YGR+VI  P TK + V+ 
Subjt:  MGWLIRERRGPSWKQGWAEQALASIAPPPRPLLAVLGILVILLSVSSYSSYRSQVKRTKVNFKIFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV

Query:  AEGTAASPWGAAALLVVLLVLISYQPYFHSKWFPSIWRPY
        AE     PWG A L++VL++++SYQPYFHS W+P IW  Y
Subjt:  AEGTAASPWGAAALLVVLLVLISYQPYFHSKWFPSIWRPY

TrEMBL top hitse value%identityAlignment
A0A0A0LNS9 Uncharacterized protein1.2e-6690.21Show/hide
Query:  MGWLIRERRGPSWKQGWAEQALASIAPPPRPLLAVLGILVILLSVSSYSSYRSQVKRTKVNFKIFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV
        MGWLIRERRGP+WKQGWAEQAL+SI PPPRPLLA+LGILVILLSVSSYSSYRSQVK+T++NFK+FFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV
Subjt:  MGWLIRERRGPSWKQGWAEQALASIAPPPRPLLAVLGILVILLSVSSYSSYRSQVKRTKVNFKIFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV

Query:  AEGTA-ASPWGAAALLVVLLVLISYQPYFHSKWFPSIWRPYYY
         EG A ASPWGAA LLVVLLVL+SYQPYFHSKWFP+IWRPYYY
Subjt:  AEGTA-ASPWGAAALLVVLLVLISYQPYFHSKWFPSIWRPYYY

A0A2P5DBR5 Transmembrane protein1.3e-3854.29Show/hide
Query:  MGWLIRERRGPSWKQGWAEQALASIAPPPRPLLAVLGILVILLSVSSYSSYRSQVKRTKVNFKIFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV
        MGW +RE    SWK GW E+ LAS++ PP PL+A++GI+V+LLS+SSY++Y+SQV++T + FK+F L LPL+ +F+ NS+ +YG L II+P TK EP   
Subjt:  MGWLIRERRGPSWKQGWAEQALASIAPPPRPLLAVLGILVILLSVSSYSSYRSQVKRTKVNFKIFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV

Query:  AEGTAASPWGAAALLVVLLVLISYQPYFHSKWFPSIWRPY
        ++G   SPWG A LL++L+VLISY+ YFHSKW+P +W  Y
Subjt:  AEGTAASPWGAAALLVVLLVLISYQPYFHSKWFPSIWRPY

A0A5A7VAG3 Uncharacterized protein1.2e-6690.21Show/hide
Query:  MGWLIRERRGPSWKQGWAEQALASIAPPPRPLLAVLGILVILLSVSSYSSYRSQVKRTKVNFKIFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV
        MGWLIRERRGP+WKQGWAEQAL+SI PPPRPLLA+LGILVILLSVSSYSSYRSQVK+T++NFK+FFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV
Subjt:  MGWLIRERRGPSWKQGWAEQALASIAPPPRPLLAVLGILVILLSVSSYSSYRSQVKRTKVNFKIFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV

Query:  AEGTA-ASPWGAAALLVVLLVLISYQPYFHSKWFPSIWRPYYY
         EG A ASPWGAA LLVVLLVL+SYQPYFHSKWFP+IWRPYYY
Subjt:  AEGTA-ASPWGAAALLVVLLVLISYQPYFHSKWFPSIWRPYYY

A0A5N6R8L3 Uncharacterized protein4.2e-4054.93Show/hide
Query:  MGWLIRERRGPSWKQGWAEQALASIAPPPRPLLAVLGILVILLSVSSYSSYRSQVKRTKVNFKIFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV
        MGW +RERRGP+WKQGW EQ L SI+PPP PLL + GI+V+LL +SSY++Y+SQ+ +T +NFK F  LLPL+ +FV + I +YGR+VI+ P TK++ V+ 
Subjt:  MGWLIRERRGPSWKQGWAEQALASIAPPPRPLLAVLGILVILLSVSSYSSYRSQVKRTKVNFKIFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV

Query:  AEGTAASPWGAAALLVVLLVLISYQPYFHSKWFPSIWRPYYY
        A+     PWG   LL++L++++SYQ YFHSKW+P IW   YY
Subjt:  AEGTAASPWGAAALLVVLLVLISYQPYFHSKWFPSIWRPYYY

A0A6P9DT84 uncharacterized protein LOC1183438142.7e-3954.29Show/hide
Query:  MGWLIRERRGPSWKQGWAEQALASIAPPPRPLLAVLGILVILLSVSSYSSYRSQVKRTKVNFKIFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV
        MGW  RERRGP+WK GW EQ LASI+PPP PL+A+ GI+V+LL ++SY +YRSQ+++T + FK+F  +LP++ +F+ +SI +YGR+VI  P TK + V+ 
Subjt:  MGWLIRERRGPSWKQGWAEQALASIAPPPRPLLAVLGILVILLSVSSYSSYRSQVKRTKVNFKIFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYV

Query:  AEGTAASPWGAAALLVVLLVLISYQPYFHSKWFPSIWRPY
        AE     PWG A L++VL++++SYQPYFHS W+P IW  Y
Subjt:  AEGTAASPWGAAALLVVLLVLISYQPYFHSKWFPSIWRPY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G21180.1 unknown protein8.7e-0630.17Show/hide
Query:  SIAPPPRPLLAVLGILVILLSVSSYSSYRSQVKRTKVNFKIFFLLLPLVFVF-------VGNSIVRYGRLVIITPRTKLEPVYVAEGTAASPWGAAALLV
        S++P P P+L +L +  + L  S Y S     +  +       LL+PL  +        + N     G        T + P    +G  +SPWG AAL+V
Subjt:  SIAPPPRPLLAVLGILVILLSVSSYSSYRSQVKRTKVNFKIFFLLLPLVFVF-------VGNSIVRYGRLVIITPRTKLEPVYVAEGTAASPWGAAALLV

Query:  VLLVLISYQPYFHSKW
        +LLVL+ YQ  F   W
Subjt:  VLLVLISYQPYFHSKW

AT5G19875.1 unknown protein6.0e-0732.71Show/hide
Query:  PRPLLAVLGILV-ILLSVSSYSSYRSQVKRTKVNFKIFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYVAEGTAASPWGAAALLVVLLVLISYQPY
        P P L  L I+V  +LS + Y ++ S ++ T  + K+ F+  PL  + + +     G L    P  + + ++ A    +SPWG AA+LV++L ++SYQ  
Subjt:  PRPLLAVLGILV-ILLSVSSYSSYRSQVKRTKVNFKIFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYVAEGTAASPWGAAALLVVLLVLISYQPY

Query:  FHSKWFP
        F  +WFP
Subjt:  FHSKWFP

AT5G42146.1 unknown protein2.6e-2643.07Show/hide
Query:  MGWLIRERRGPSWKQGWAEQALASIAPPPRPLLAVLGILVILLSVSSYSSYRSQVKRTKVNFKIFFLLLPLVFVFVGNSIVRYGRLVIITP-RTKLEPVY
        MGW I+ERRG SWK+GW E+ L + + PP  LLA+L I+ +LL +SSY  Y+ +V++T  N K+F L LP++FVFV  S+    RL+  +    +     
Subjt:  MGWLIRERRGPSWKQGWAEQALASIAPPPRPLLAVLGILVILLSVSSYSSYRSQVKRTKVNFKIFFLLLPLVFVFVGNSIVRYGRLVIITP-RTKLEPVY

Query:  VAEGTAASPWGAAALLVVLLVLISYQPYFHSKWFPSI
           G    PWG   +L++LL+L+S Q YFHS W+P++
Subjt:  VAEGTAASPWGAAALLVVLLVLISYQPYFHSKWFPSI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTGGTTGATAAGAGAGAGGAGAGGCCCATCATGGAAACAAGGATGGGCAGAGCAGGCCTTGGCCTCCATAGCTCCTCCGCCAAGGCCTCTGCTTGCTGTTCTTGG
AATCTTGGTCATTTTGCTATCTGTGTCATCATATTCAAGCTACAGATCCCAGGTGAAAAGAACAAAGGTCAATTTCAAGATCTTTTTCTTGTTATTACCTCTAGTGTTTG
TGTTTGTTGGAAACTCGATTGTTAGATATGGTCGTCTTGTAATCATCACTCCGAGAACAAAGCTCGAGCCGGTTTACGTTGCAGAAGGCACTGCTGCCTCACCTTGGGGT
GCGGCGGCGTTGCTGGTGGTGTTGTTGGTTTTGATATCTTATCAGCCTTACTTCCACTCTAAATGGTTTCCATCAATATGGAGACCGTATTATTATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTTGGTTGATAAGAGAGAGGAGAGGCCCATCATGGAAACAAGGATGGGCAGAGCAGGCCTTGGCCTCCATAGCTCCTCCGCCAAGGCCTCTGCTTGCTGTTCTTGG
AATCTTGGTCATTTTGCTATCTGTGTCATCATATTCAAGCTACAGATCCCAGGTGAAAAGAACAAAGGTCAATTTCAAGATCTTTTTCTTGTTATTACCTCTAGTGTTTG
TGTTTGTTGGAAACTCGATTGTTAGATATGGTCGTCTTGTAATCATCACTCCGAGAACAAAGCTCGAGCCGGTTTACGTTGCAGAAGGCACTGCTGCCTCACCTTGGGGT
GCGGCGGCGTTGCTGGTGGTGTTGTTGGTTTTGATATCTTATCAGCCTTACTTCCACTCTAAATGGTTTCCATCAATATGGAGACCGTATTATTATTAG
Protein sequenceShow/hide protein sequence
MGWLIRERRGPSWKQGWAEQALASIAPPPRPLLAVLGILVILLSVSSYSSYRSQVKRTKVNFKIFFLLLPLVFVFVGNSIVRYGRLVIITPRTKLEPVYVAEGTAASPWG
AAALLVVLLVLISYQPYFHSKWFPSIWRPYYY