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Carg04023 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04023
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionthioredoxin H1-like
Genome locationCarg_Chr12:2649762..2651118
RNA-Seq ExpressionCarg04023
SyntenyCarg04023
Gene Ontology termsNA
InterPro domainsIPR013766 - Thioredoxin domain
IPR017937 - Thioredoxin, conserved site
IPR036249 - Thioredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585568.1 putative cysteine protease RD21C, partial [Cucurbita argyrosperma subsp. sororia]1.6e-58100Show/hide
Query:  MAVEGQVIPLRDAKEFDVIIDKEKESGKLIVIDFTASWCPPCRIIAPVFAELAKAHVNVTFLKVDVDNVKEIAERFEVNAMPTFVFLKGGKEVHRIVGAD
        MAVEGQVIPLRDAKEFDVIIDKEKESGKLIVIDFTASWCPPCRIIAPVFAELAKAHVNVTFLKVDVDNVKEIAERFEVNAMPTFVFLKGGKEVHRIVGAD
Subjt:  MAVEGQVIPLRDAKEFDVIIDKEKESGKLIVIDFTASWCPPCRIIAPVFAELAKAHVNVTFLKVDVDNVKEIAERFEVNAMPTFVFLKGGKEVHRIVGAD

Query:  KVELGVKVLELSAAPATSAA
        KVELGVKVLELSAAPATSAA
Subjt:  KVELGVKVLELSAAPATSAA

XP_022951329.1 thioredoxin H1-like [Cucurbita moschata]1.6e-58100Show/hide
Query:  MAVEGQVIPLRDAKEFDVIIDKEKESGKLIVIDFTASWCPPCRIIAPVFAELAKAHVNVTFLKVDVDNVKEIAERFEVNAMPTFVFLKGGKEVHRIVGAD
        MAVEGQVIPLRDAKEFDVIIDKEKESGKLIVIDFTASWCPPCRIIAPVFAELAKAHVNVTFLKVDVDNVKEIAERFEVNAMPTFVFLKGGKEVHRIVGAD
Subjt:  MAVEGQVIPLRDAKEFDVIIDKEKESGKLIVIDFTASWCPPCRIIAPVFAELAKAHVNVTFLKVDVDNVKEIAERFEVNAMPTFVFLKGGKEVHRIVGAD

Query:  KVELGVKVLELSAAPATSAA
        KVELGVKVLELSAAPATSAA
Subjt:  KVELGVKVLELSAAPATSAA

XP_022962605.1 thioredoxin H5-like [Cucurbita moschata]2.4e-4375.83Show/hide
Query:  MAVEGQVIPLRDAKEFDVIIDKEKESGKLIVIDFTASWCPPCRIIAPVFAELAKAHVNVTFLKVDVDNVKEIAERFEVNAMPTFVFLKGGKEVHRIVGAD
        MA EGQVI +R  +EFD ++ +  E+GKLIV+DFTASWCPPCR IAPVFAE+AKAHVNV FLKVDVD++KEIA++FEV AMPTFVFLKGG EVHRIVGAD
Subjt:  MAVEGQVIPLRDAKEFDVIIDKEKESGKLIVIDFTASWCPPCRIIAPVFAELAKAHVNVTFLKVDVDNVKEIAERFEVNAMPTFVFLKGGKEVHRIVGAD

Query:  KVELGVKVLELSAAPATSAA
        KVELG KVLEL A  ATS+A
Subjt:  KVELGVKVLELSAAPATSAA

XP_023002552.1 thioredoxin H1-like [Cucurbita maxima]1.5e-5391.67Show/hide
Query:  MAVEGQVIPLRDAKEFDVIIDKEKESGKLIVIDFTASWCPPCRIIAPVFAELAKAHVNVTFLKVDVDNVKEIAERFEVNAMPTFVFLKGGKEVHRIVGAD
        MAVEGQVIPLRDA+EFD IIDKEKESG+LIVIDFTASWCPPCR IAPVFAELAKAHV+VTFLKVDVDNVKEIA+RFEV AMPTFVFLKGG EVHRIVGAD
Subjt:  MAVEGQVIPLRDAKEFDVIIDKEKESGKLIVIDFTASWCPPCRIIAPVFAELAKAHVNVTFLKVDVDNVKEIAERFEVNAMPTFVFLKGGKEVHRIVGAD

Query:  KVELGVKVLELSAAPATSAA
        KVELGVKVLELSAAPAT A+
Subjt:  KVELGVKVLELSAAPATSAA

XP_023536799.1 thioredoxin H1-like [Cucurbita pepo subsp. pepo]1.0e-5494.17Show/hide
Query:  MAVEGQVIPLRDAKEFDVIIDKEKESGKLIVIDFTASWCPPCRIIAPVFAELAKAHVNVTFLKVDVDNVKEIAERFEVNAMPTFVFLKGGKEVHRIVGAD
        MAVEGQVI LRDAKEFD I+DKEKESGKLIVIDFTASWCPPCR IAPVFAELAKAHVNVTFLKVDVDNVKEIAE+FEV AMPTFVFLKGG EVHRIVGAD
Subjt:  MAVEGQVIPLRDAKEFDVIIDKEKESGKLIVIDFTASWCPPCRIIAPVFAELAKAHVNVTFLKVDVDNVKEIAERFEVNAMPTFVFLKGGKEVHRIVGAD

Query:  KVELGVKVLELSAAPATSAA
        KVELGVKVLELSAAPATSAA
Subjt:  KVELGVKVLELSAAPATSAA

TrEMBL top hitse value%identityAlignment
A0A6J1CST8 thioredoxin H-type 1-like9.6e-3871.54Show/hide
Query:  MAVEGQVIPLRDAKEFDVIIDKEKESGKLIVIDFTASWCPPCRIIAPVFAELAKAHVNVTFLKVDVDNVKEIAERFEVNAMPTFVFLKGGKEV--HRIVG
        MA EGQVI + + + FD ++ K  ESGKLIV+DFTASWCPPCR IAP+FAELAKAH+ V FLKVDVD VKE++E+FEV AMPTFVFLK G EV   RIVG
Subjt:  MAVEGQVIPLRDAKEFDVIIDKEKESGKLIVIDFTASWCPPCRIIAPVFAELAKAHVNVTFLKVDVDNVKEIAERFEVNAMPTFVFLKGGKEV--HRIVG

Query:  ADKVELGVKVLELSA-APATSAA
        ADKVELG +VL LSA A ATSAA
Subjt:  ADKVELGVKVLELSA-APATSAA

A0A6J1GID1 thioredoxin H1-like7.6e-59100Show/hide
Query:  MAVEGQVIPLRDAKEFDVIIDKEKESGKLIVIDFTASWCPPCRIIAPVFAELAKAHVNVTFLKVDVDNVKEIAERFEVNAMPTFVFLKGGKEVHRIVGAD
        MAVEGQVIPLRDAKEFDVIIDKEKESGKLIVIDFTASWCPPCRIIAPVFAELAKAHVNVTFLKVDVDNVKEIAERFEVNAMPTFVFLKGGKEVHRIVGAD
Subjt:  MAVEGQVIPLRDAKEFDVIIDKEKESGKLIVIDFTASWCPPCRIIAPVFAELAKAHVNVTFLKVDVDNVKEIAERFEVNAMPTFVFLKGGKEVHRIVGAD

Query:  KVELGVKVLELSAAPATSAA
        KVELGVKVLELSAAPATSAA
Subjt:  KVELGVKVLELSAAPATSAA

A0A6J1HFK3 thioredoxin H5-like1.2e-4375.83Show/hide
Query:  MAVEGQVIPLRDAKEFDVIIDKEKESGKLIVIDFTASWCPPCRIIAPVFAELAKAHVNVTFLKVDVDNVKEIAERFEVNAMPTFVFLKGGKEVHRIVGAD
        MA EGQVI +R  +EFD ++ +  E+GKLIV+DFTASWCPPCR IAPVFAE+AKAHVNV FLKVDVD++KEIA++FEV AMPTFVFLKGG EVHRIVGAD
Subjt:  MAVEGQVIPLRDAKEFDVIIDKEKESGKLIVIDFTASWCPPCRIIAPVFAELAKAHVNVTFLKVDVDNVKEIAERFEVNAMPTFVFLKGGKEVHRIVGAD

Query:  KVELGVKVLELSAAPATSAA
        KVELG KVLEL A  ATS+A
Subjt:  KVELGVKVLELSAAPATSAA

A0A6J1KB35 thioredoxin H5-like6.4e-4273.33Show/hide
Query:  MAVEGQVIPLRDAKEFDVIIDKEKESGKLIVIDFTASWCPPCRIIAPVFAELAKAHVNVTFLKVDVDNVKEIAERFEVNAMPTFVFLKGGKEVHRIVGAD
        MA EGQ I +R   EFD ++ +  E+GKLIV+DFTASWCPPCR IAPVFAE+AKAH NV FLKVDVD++KEIA++FEV AMPTFVFLKGG EV+RIVGAD
Subjt:  MAVEGQVIPLRDAKEFDVIIDKEKESGKLIVIDFTASWCPPCRIIAPVFAELAKAHVNVTFLKVDVDNVKEIAERFEVNAMPTFVFLKGGKEVHRIVGAD

Query:  KVELGVKVLELSAAPATSAA
        KVELG KVLEL A  ATS+A
Subjt:  KVELGVKVLELSAAPATSAA

Q8H9E2 Thioredoxin h7.3e-5491.67Show/hide
Query:  MAVEGQVIPLRDAKEFDVIIDKEKESGKLIVIDFTASWCPPCRIIAPVFAELAKAHVNVTFLKVDVDNVKEIAERFEVNAMPTFVFLKGGKEVHRIVGAD
        MAVEGQVIPLRDA+EFD IIDKEKESG+LIVIDFTASWCPPCR IAPVFAELAKAHV+VTFLKVDVDNVKEIA+RFEV AMPTFVFLKGG EVHRIVGAD
Subjt:  MAVEGQVIPLRDAKEFDVIIDKEKESGKLIVIDFTASWCPPCRIIAPVFAELAKAHVNVTFLKVDVDNVKEIAERFEVNAMPTFVFLKGGKEVHRIVGAD

Query:  KVELGVKVLELSAAPATSAA
        KVELGVKVLELSAAPAT A+
Subjt:  KVELGVKVLELSAAPATSAA

SwissProt top hitse value%identityAlignment
A2YIW7 Thioredoxin H-type1.0e-2852.94Show/hide
Query:  AVEGQVIPLRDAKEFDVIIDKEKESGKLIVIDFTASWCPPCRIIAPVFAELAKAHVNVTFLKVDVDNVKEIAERFEVNAMPTFVFLKGGKEVHRIVGADK
        A EG VI   +  EFD  + K KE+GK+++IDFTASWC PCR IAPVFAE AK      FLKVDVD +KE+AE++ V AMPTF+F+K G E  ++VGA K
Subjt:  AVEGQVIPLRDAKEFDVIIDKEKESGKLIVIDFTASWCPPCRIIAPVFAELAKAHVNVTFLKVDVDNVKEIAERFEVNAMPTFVFLKGGKEVHRIVGADK

Query:  VELGVKVLELSAAPATSAA
         +L   +++   A A SA+
Subjt:  VELGVKVLELSAAPATSAA

P68177 Thioredoxin H-type 14.3e-2750.89Show/hide
Query:  GQVIPLRDAKEFDVIIDKEKESGKLIVIDFTASWCPPCRIIAPVFAELAKAHVNVTFLKVDVDNVKEIAERFEVNAMPTFVFLKGGKEVHRIVGADKVEL
        G+VI     ++++  +   KES KLIVIDFTA WCPPCR IAP+F ELAK H++V F KVDVD +  +A+ F+V AMPTFV++KG +++ ++VGA K E+
Subjt:  GQVIPLRDAKEFDVIIDKEKESGKLIVIDFTASWCPPCRIIAPVFAELAKAHVNVTFLKVDVDNVKEIAERFEVNAMPTFVFLKGGKEVHRIVGADKVEL

Query:  GVKVLELSAAPA
          K+L+ S   A
Subjt:  GVKVLELSAAPA

Q0D840 Thioredoxin H11.0e-2852.94Show/hide
Query:  AVEGQVIPLRDAKEFDVIIDKEKESGKLIVIDFTASWCPPCRIIAPVFAELAKAHVNVTFLKVDVDNVKEIAERFEVNAMPTFVFLKGGKEVHRIVGADK
        A EG VI   +  EFD  + K KE+GK+++IDFTASWC PCR IAPVFAE AK      FLKVDVD +KE+AE++ V AMPTF+F+K G E  ++VGA K
Subjt:  AVEGQVIPLRDAKEFDVIIDKEKESGKLIVIDFTASWCPPCRIIAPVFAELAKAHVNVTFLKVDVDNVKEIAERFEVNAMPTFVFLKGGKEVHRIVGADK

Query:  VELGVKVLELSAAPATSAA
         +L   +++   A A SA+
Subjt:  VELGVKVLELSAAPATSAA

Q39241 Thioredoxin H51.5e-2753.64Show/hide
Query:  MAVEGQVIPLRDAKEFDVIIDKEKESGKLIVIDFTASWCPPCRIIAPVFAELAKAHVNVTFLKVDVDNVKEIAERFEVNAMPTFVFLKGGKEVHRIVGAD
        MA EG+VI     + ++  +    ES KLIVIDFTASWCPPCR IAPVFAE+AK   NV F K+DVD ++ +A+ F+V AMPTFVF+K G  + R+VGA 
Subjt:  MAVEGQVIPLRDAKEFDVIIDKEKESGKLIVIDFTASWCPPCRIIAPVFAELAKAHVNVTFLKVDVDNVKEIAERFEVNAMPTFVFLKGGKEVHRIVGAD

Query:  KVELGVKVLE
        K E+  K+++
Subjt:  KVELGVKVLE

Q96419 Thioredoxin H-type1.9e-2757.41Show/hide
Query:  MAVEGQVIPLRDAKEFDVIIDKEKESGKLIVIDFTASWCPPCRIIAPVFAELAKAHVNVTFLKVDVDNVKEIAERFEVNAMPTFVFLKGGKEVHRIVGAD
        MA E QVI     +E++    K K+SGKLIVIDFTASWC PCR+I P  +ELAK   +V F KVDVD++K++AE ++V AMP+FV LK G+EV RIVGA 
Subjt:  MAVEGQVIPLRDAKEFDVIIDKEKESGKLIVIDFTASWCPPCRIIAPVFAELAKAHVNVTFLKVDVDNVKEIAERFEVNAMPTFVFLKGGKEVHRIVGAD

Query:  KVELGVKV
        K EL  K+
Subjt:  KVELGVKV

Arabidopsis top hitse value%identityAlignment
AT1G19730.1 Thioredoxin superfamily protein6.8e-2854.55Show/hide
Query:  AVEGQVIPLRDAKEFDVIIDKEKESGKLIVIDFTASWCPPCRIIAPVFAELAKAHV-NVTFLKVDVDNVKEIAERFEVNAMPTFVFLKGGKEVHRIVGAD
        A EGQVI       + V +DK KES KLIVIDFTASWCPPCR+IAP+F +LAK  + +  F KVDVD ++ +A+ F V AMPTFVF+K G+ V ++VGA+
Subjt:  AVEGQVIPLRDAKEFDVIIDKEKESGKLIVIDFTASWCPPCRIIAPVFAELAKAHV-NVTFLKVDVDNVKEIAERFEVNAMPTFVFLKGGKEVHRIVGAD

Query:  KVELGVKVLE
        K +L  K+++
Subjt:  KVELGVKVLE

AT1G45145.1 thioredoxin H-type 51.1e-2853.64Show/hide
Query:  MAVEGQVIPLRDAKEFDVIIDKEKESGKLIVIDFTASWCPPCRIIAPVFAELAKAHVNVTFLKVDVDNVKEIAERFEVNAMPTFVFLKGGKEVHRIVGAD
        MA EG+VI     + ++  +    ES KLIVIDFTASWCPPCR IAPVFAE+AK   NV F K+DVD ++ +A+ F+V AMPTFVF+K G  + R+VGA 
Subjt:  MAVEGQVIPLRDAKEFDVIIDKEKESGKLIVIDFTASWCPPCRIIAPVFAELAKAHVNVTFLKVDVDNVKEIAERFEVNAMPTFVFLKGGKEVHRIVGAD

Query:  KVELGVKVLE
        K E+  K+++
Subjt:  KVELGVKVLE

AT3G51030.1 thioredoxin H-type 19.2e-2553.47Show/hide
Query:  EGQVIPLRDAKEFDVIIDKEKESGKLIVIDFTASWCPPCRIIAPVFAELAKAHVNVTFLKVDVDNVKEIAERFEVNAMPTFVFLKGGKEVHRIVGADKVE
        EGQVI     + ++  + K  ES  L+V+DFTASWC PCR IAP FA+LAK   NV FLKVD D +K +A  + + AMPTF+FLK GK + ++VGA K E
Subjt:  EGQVIPLRDAKEFDVIIDKEKESGKLIVIDFTASWCPPCRIIAPVFAELAKAHVNVTFLKVDVDNVKEIAERFEVNAMPTFVFLKGGKEVHRIVGADKVE

Query:  L
        L
Subjt:  L

AT5G39950.1 thioredoxin 22.5e-2245.37Show/hide
Query:  QVIPLRDAKEFDVIIDKEKESGKLIVIDFTASWCPPCRIIAPVFAELAKAHVNVTFLKVDVDNVKEIAERFEVNAMPTFVFLKGGKEVHRIVGADKVELG
        +V+    +  + +  ++ KES KL+V+DF+ASWC PCR+I P    +A    +V F+K+DVD + ++A+ F V AMPTFV +K GKE+ RI+GA K EL 
Subjt:  QVIPLRDAKEFDVIIDKEKESGKLIVIDFTASWCPPCRIIAPVFAELAKAHVNVTFLKVDVDNVKEIAERFEVNAMPTFVFLKGGKEVHRIVGADKVELG

Query:  VKVLELSA
         KV +L A
Subjt:  VKVLELSA

AT5G42980.1 thioredoxin 36.8e-2854.81Show/hide
Query:  MAVEGQVIPLRDAKEFDVIIDKEKESGKLIVIDFTASWCPPCRIIAPVFAELAKAHVNVTFLKVDVDNVKEIAERFEVNAMPTFVFLKGGKEVHRIVGAD
        MA EG+VI     +++   +    ES KLIVIDFTA+WCPPCR IAPVFA+LAK H++V F KVDVD +  +AE F+V AMPTF+F+K G+    +VGA 
Subjt:  MAVEGQVIPLRDAKEFDVIIDKEKESGKLIVIDFTASWCPPCRIIAPVFAELAKAHVNVTFLKVDVDNVKEIAERFEVNAMPTFVFLKGGKEVHRIVGAD

Query:  KVEL
        K E+
Subjt:  KVEL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTTGAAGGTCAAGTGATTCCACTTCGCGATGCTAAAGAATTCGATGTGATAATCGATAAAGAGAAGGAATCTGGAAAACTAATTGTGATCGATTTTACTGCTTC
CTGGTGCCCGCCATGCCGTATCATTGCTCCAGTATTCGCAGAGTTGGCTAAGGCGCACGTCAATGTCACTTTCTTGAAAGTGGACGTCGATAATGTCAAGGAAATTGCTG
AGAGGTTCGAGGTGAATGCGATGCCGACCTTTGTTTTCCTGAAAGGAGGAAAAGAAGTTCACAGGATTGTTGGTGCCGACAAGGTGGAGCTAGGGGTTAAAGTACTGGAG
TTAAGCGCTGCACCTGCTACTTCTGCTGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATCGCTTCGTTTTCAAATACAGTGAGACCTTTGCAGGATACACACTCGTTTTTCTTTGAAGCAATGGCTGTTGAAGGTCAAGTGATTCCACTTCGCGATGCTAAAGAATT
CGATGTGATAATCGATAAAGAGAAGGAATCTGGAAAACTAATTGTGATCGATTTTACTGCTTCCTGGTGCCCGCCATGCCGTATCATTGCTCCAGTATTCGCAGAGTTGG
CTAAGGCGCACGTCAATGTCACTTTCTTGAAAGTGGACGTCGATAATGTCAAGGAAATTGCTGAGAGGTTCGAGGTGAATGCGATGCCGACCTTTGTTTTCCTGAAAGGA
GGAAAAGAAGTTCACAGGATTGTTGGTGCCGACAAGGTGGAGCTAGGGGTTAAAGTACTGGAGTTAAGCGCTGCACCTGCTACTTCTGCTGCTTAGATGGTCAGCTTTGA
TGATCATTTTCCCTCTTAATATTATCATTATGTTGTAATAACGATTCTGGTTTTGGGGTTTGTTGTTCTTGTGGATTCCATGACAGTATCTCTCTGTGATGCTTACTTGT
GTTAAGAATGTTTGTAAACGATATATGTAGAATAAGATTTAATGTTTCATAATGTATCTCTGCTCATCAAGCTTTTGAATTCAGTGATTGTTGCCTCAATGTTCACAGAT
TACTTAAGAACAGCTTACTTTTTCACCTTTTTTCTCTCATGTTTAGAAATGTCTTGATTCTGAAAAGGGTTTTAAGTTTTATGATTGGTTGAATTTGTCAACTTTGTCAA
TTTTGTTCTTGGCTCTCCAATGTTGTTCTTTATGCTTACTTAGGTTGGGTAAGGATTTTGGGGCCCTTTGTTCATATGGGAATGAGAAT
Protein sequenceShow/hide protein sequence
MAVEGQVIPLRDAKEFDVIIDKEKESGKLIVIDFTASWCPPCRIIAPVFAELAKAHVNVTFLKVDVDNVKEIAERFEVNAMPTFVFLKGGKEVHRIVGADKVELGVKVLE
LSAAPATSAA