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Carg04034 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04034
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionnucleolar protein 14 isoform X1
Genome locationCarg_Chr12:2731410..2731957
RNA-Seq ExpressionCarg04034
SyntenyCarg04034
Gene Ontology termsGO:0030490 - maturation of SSU-rRNA (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0030692 - Noc4p-Nop14p complex (cellular component)
GO:0032040 - small-subunit processome (cellular component)
InterPro domainsIPR007276 - Nucleolar protein 14


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064777.1 nucleolar protein 14 isoform X1 [Cucumis melo var. makuwa]5.9e-1274.07Show/hide
Query:  ERKGEEHRIGLARSLAIGKRKMMLLMEYEKSGKATEFSDERIGEWDEELGNLTR
        +RKGEE RIGLARSLAI KRK  LL EYE+S K+TEFSD+RIGEWDEELG   +
Subjt:  ERKGEEHRIGLARSLAIGKRKMMLLMEYEKSGKATEFSDERIGEWDEELGNLTR
KAG7020493.1 hypothetical protein SDJN02_17178 [Cucurbita argyrosperma subsp. argyrosperma]1.7e-27100Show/hide
Query:  MERKGEEHRIGLARSLAIGKRKMMLLMEYEKSGKATEFSDERIGEWDEELGNLTRLFYVRSANGR
        MERKGEEHRIGLARSLAIGKRKMMLLMEYEKSGKATEFSDERIGEWDEELGNLTRLFYVRSANGR
Subjt:  MERKGEEHRIGLARSLAIGKRKMMLLMEYEKSGKATEFSDERIGEWDEELGNLTRLFYVRSANGR
XP_008445433.1 PREDICTED: nucleolar protein 14 isoform X1 [Cucumis melo]5.9e-1274.07Show/hide
Query:  ERKGEEHRIGLARSLAIGKRKMMLLMEYEKSGKATEFSDERIGEWDEELGNLTR
        +RKGEE RIGLARSLAI KRK  LL EYE+S K+TEFSD+RIGEWDEELG   +
Subjt:  ERKGEEHRIGLARSLAIGKRKMMLLMEYEKSGKATEFSDERIGEWDEELGNLTR
XP_011657408.1 nucleolar protein 14 isoform X1 [Cucumis sativus]5.9e-1274.07Show/hide
Query:  ERKGEEHRIGLARSLAIGKRKMMLLMEYEKSGKATEFSDERIGEWDEELGNLTR
        +RKGEE RIGLARSLAI KRK  LL EYE+S K+TEFSD+RIGEWDEELG   +
Subjt:  ERKGEEHRIGLARSLAIGKRKMMLLMEYEKSGKATEFSDERIGEWDEELGNLTR
XP_011657409.1 nucleolar protein 14 isoform X2 [Cucumis sativus]5.9e-1274.07Show/hide
Query:  ERKGEEHRIGLARSLAIGKRKMMLLMEYEKSGKATEFSDERIGEWDEELGNLTR
        +RKGEE RIGLARSLAI KRK  LL EYE+S K+TEFSD+RIGEWDEELG   +
Subjt:  ERKGEEHRIGLARSLAIGKRKMMLLMEYEKSGKATEFSDERIGEWDEELGNLTR
TrEMBL top hitse value%identityAlignment
A0A0A0KD89 Uncharacterized protein2.9e-1274.07Show/hide
Query:  ERKGEEHRIGLARSLAIGKRKMMLLMEYEKSGKATEFSDERIGEWDEELGNLTR
        +RKGEE RIGLARSLAI KRK  LL EYE+S K+TEFSD+RIGEWDEELG   +
Subjt:  ERKGEEHRIGLARSLAIGKRKMMLLMEYEKSGKATEFSDERIGEWDEELGNLTR
A0A1S3BC88 nucleolar protein 14 isoform X22.9e-1274.07Show/hide
Query:  ERKGEEHRIGLARSLAIGKRKMMLLMEYEKSGKATEFSDERIGEWDEELGNLTR
        +RKGEE RIGLARSLAI KRK  LL EYE+S K+TEFSD+RIGEWDEELG   +
Subjt:  ERKGEEHRIGLARSLAIGKRKMMLLMEYEKSGKATEFSDERIGEWDEELGNLTR
A0A1S3BDK2 nucleolar protein 14 isoform X12.9e-1274.07Show/hide
Query:  ERKGEEHRIGLARSLAIGKRKMMLLMEYEKSGKATEFSDERIGEWDEELGNLTR
        +RKGEE RIGLARSLAI KRK  LL EYE+S K+TEFSD+RIGEWDEELG   +
Subjt:  ERKGEEHRIGLARSLAIGKRKMMLLMEYEKSGKATEFSDERIGEWDEELGNLTR
A0A5A7VCP6 Nucleolar protein 14 isoform X12.9e-1274.07Show/hide
Query:  ERKGEEHRIGLARSLAIGKRKMMLLMEYEKSGKATEFSDERIGEWDEELGNLTR
        +RKGEE RIGLARSLAI KRK  LL EYE+S K+TEFSD+RIGEWDEELG   +
Subjt:  ERKGEEHRIGLARSLAIGKRKMMLLMEYEKSGKATEFSDERIGEWDEELGNLTR
A0A6J1KKH7 nucleolar protein 14 isoform X11.4e-1174.07Show/hide
Query:  ERKGEEHRIGLARSLAIGKRKMMLLMEYEKSGKATEFSDERIGEWDEELGNLTR
        +RKGEE RIGLARSLAI KRK  LL EYE+SGK+TEFSD+RIGE DEELG   +
Subjt:  ERKGEEHRIGLARSLAIGKRKMMLLMEYEKSGKATEFSDERIGEWDEELGNLTR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G69070.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nop14-like protein (InterPro:IPR007276); Has 69842 Blast hits to 35213 proteins in 1572 species: Archae - 363; Bacteria - 20593; Metazoa - 20851; Fungi - 8010; Plants - 2912; Viruses - 517; Other Eukaryotes - 16596 (source: NCBI BLink).8.0e-0746.3Show/hide
Query:  ERKGEEHRIGLARSLAIGKRKMMLLMEYEKSGKATEFSDERIGEWDEELGNLTR
        +RKGEE  + ++R+ A+ KRK  L  EYE+S K++ F D+RIGE ++ELG   +
Subjt:  ERKGEEHRIGLARSLAIGKRKMMLLMEYEKSGKATEFSDERIGEWDEELGNLTR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACGTAAGGGAGAAGAGCATCGTATTGGCCTGGCTCGTTCACTCGCGATTGGAAAGAGGAAAATGATGCTGTTGATGGAGTACGAGAAAAGCGGTAAGGCTACGGA
ATTTTCCGATGAGCGAATTGGGGAATGGGACGAAGAGCTTGGGAATTTGACGAGGCTATTTTACGTTCGCAGTGCGAATGGAAGGTGA
mRNA sequenceShow/hide mRNA sequence
TAACGGACCCGGTCTCATTTTCTCAGATTGTTGATTCTTTGGTTTTGCTGGGATCTTGTCGATCTTTATTTGGTGAATCCATGGCGGAGTTATCAAACCTTGGTTCAAGC
AACAATGAAATGAAGAACAAGAAGAAGAGTGCTGTTGTGAAAGCCTTCTCGATGAAAGTCGTGCGCTGAAGGAGAATCCATTCGATGGAACGTAAGGGAGAAGAGCATCG
TATTGGCCTGGCTCGTTCACTCGCGATTGGAAAGAGGAAAATGATGCTGTTGATGGAGTACGAGAAAAGCGGTAAGGCTACGGAATTTTCCGATGAGCGAATTGGGGAAT
GGGACGAAGAGCTTGGGAATTTGACGAGGCTATTTTACGTTCGCAGTGCGAATGGAAGGTGAGTGCGTTGGTCTGTTTCGAGCATTTGGTTCT
Protein sequenceShow/hide protein sequence
MERKGEEHRIGLARSLAIGKRKMMLLMEYEKSGKATEFSDERIGEWDEELGNLTRLFYVRSANGR