; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg04041 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04041
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPentatricopeptide repeat-containing protein
Genome locationCarg_Chr12:2765141..2766152
RNA-Seq ExpressionCarg04041
SyntenyCarg04041
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR044657 - Pentatricopeptide repeat-containing protein NFD5-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585585.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]1.3e-16599.33Show/hide
Query:  VKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPNEKVYNSMIMAFVNA
        +KVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQP+EKVYNSMIMAFVNA
Subjt:  VKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPNEKVYNSMIMAFVNA

Query:  GQPKLGESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVA
        GQPKLGESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVA
Subjt:  GQPKLGESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVA

Query:  AYGKKNLLDKALNLLLQLEKNGFEPGVETYAALVDWLGKLQLVDEAEQLLGKIGAHREMSCLLRFILASVICTQELGSRKRRYQRSGYCYSWWLCAGC
        AYGKKNLLDKALNLLLQLEKNGFEPGVETYAALVDWLGKLQLVDEAEQLLGKIGAHREMSCLLRFILASVICTQELGSRKRRYQRSGYCYSWWLCAGC
Subjt:  AYGKKNLLDKALNLLLQLEKNGFEPGVETYAALVDWLGKLQLVDEAEQLLGKIGAHREMSCLLRFILASVICTQELGSRKRRYQRSGYCYSWWLCAGC

KAG7020500.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-168100Show/hide
Query:  MSGVKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPNEKVYNSMIMAF
        MSGVKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPNEKVYNSMIMAF
Subjt:  MSGVKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPNEKVYNSMIMAF

Query:  VNAGQPKLGESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTAS
        VNAGQPKLGESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTAS
Subjt:  VNAGQPKLGESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTAS

Query:  MVAAYGKKNLLDKALNLLLQLEKNGFEPGVETYAALVDWLGKLQLVDEAEQLLGKIGAHREMSCLLRFILASVICTQELGSRKRRYQRSGYCYSWWLCAG
        MVAAYGKKNLLDKALNLLLQLEKNGFEPGVETYAALVDWLGKLQLVDEAEQLLGKIGAHREMSCLLRFILASVICTQELGSRKRRYQRSGYCYSWWLCAG
Subjt:  MVAAYGKKNLLDKALNLLLQLEKNGFEPGVETYAALVDWLGKLQLVDEAEQLLGKIGAHREMSCLLRFILASVICTQELGSRKRRYQRSGYCYSWWLCAG

Query:  C
        C
Subjt:  C

XP_022951668.1 pentatricopeptide repeat-containing protein At1g19525-like [Cucurbita moschata]9.1e-13294.21Show/hide
Query:  VKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPNEKVYNSMIMAFVNA
        +KVA+LLLNEE FETNIRDYSKLVDVHAKENRLEDAERILKMM+EKG+TPDILTATVLVHMYSKVGNLDRAKEAFDTLRS GFQP+EKVYNSMIMAFVNA
Subjt:  VKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPNEKVYNSMIMAFVNA

Query:  GQPKLGESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVA
        GQPKLGESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVETYGLAGDPDQARNNFDYMIKIGHRPD  CTASMVA
Subjt:  GQPKLGESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVA

Query:  AYGKKNLLDKALNLLLQLEKNGFEPGVETYAALVDWLGKLQLVDEAEQLLGKIGAHREM
        AYG KNLLDKALNLLLQLEK+GFEPGVETYAALVDWLGKLQLVDEAEQLLGKIGA  ++
Subjt:  AYGKKNLLDKALNLLLQLEKNGFEPGVETYAALVDWLGKLQLVDEAEQLLGKIGAHREM

XP_022996674.1 putative pentatricopeptide repeat-containing protein At2g02150 [Cucurbita maxima]4.7e-12892.16Show/hide
Query:  VKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPNEKVYNSMIMAFVNA
        +KVAELLL+EESF+TNIRDYSKLVDVHAKENRLEDAERILK MNEKG+TPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQP+EKVYNSMIMAFVN+
Subjt:  VKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPNEKVYNSMIMAFVNA

Query:  GQPKLGESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVA
        GQPKLGES+MREMEARDIKPSKDIYMALLRSFSQRGDISGAGRI+ATMQF+G SPSLESC LLVE YG AGDPDQARNNFDYMIKIGHRPD RCTASMVA
Subjt:  GQPKLGESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVA

Query:  AYGKKNLLDKALNLLLQLEKNGFEPGVETYAALVDWLGKLQLVDEAEQLLGKIGA
        AY KKNLLDKALNLLLQLEK+GFEPGV TYA LVDWLGKLQLVDEAEQ+LGKIGA
Subjt:  AYGKKNLLDKALNLLLQLEKNGFEPGVETYAALVDWLGKLQLVDEAEQLLGKIGA

XP_023002246.1 putative pentatricopeptide repeat-containing protein At2g02150 [Cucurbita maxima]2.0e-13497.25Show/hide
Query:  VKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPNEKVYNSMIMAFVNA
        +KVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMM EKG+TPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQP+EKVYNSMIMAFVNA
Subjt:  VKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPNEKVYNSMIMAFVNA

Query:  GQPKLGESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVA
        GQPKLGESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESC LLVETYGLAGDPDQARNNFDYMIKIGHRPD RCTASMVA
Subjt:  GQPKLGESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVA

Query:  AYGKKNLLDKALNLLLQLEKNGFEPGVETYAALVDWLGKLQLVDEAEQLLGKIGA
        AYGKKNLLDKALNLLLQLEK+GFEPGVETYAALVDWLGKLQLVDEAEQLLGKIGA
Subjt:  AYGKKNLLDKALNLLLQLEKNGFEPGVETYAALVDWLGKLQLVDEAEQLLGKIGA

TrEMBL top hitse value%identityAlignment
A0A6J1CRK9 pentatricopeptide repeat-containing protein At5g397104.0e-12588.37Show/hide
Query:  VKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPNEKVYNSMIMAFVNA
        +KVAEL+L+EESF+TNIRDYSKLVD HAKENRLEDAERILK MNEKG+TPDILTATVLVHMYSKVGNLDRAKEAF+TLRSHGFQP+EKVYNSMIM  VN+
Subjt:  VKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPNEKVYNSMIMAFVNA

Query:  GQPKLGESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVA
        GQPKLGES+MREMEARDIKPSKDIYMA+LRSFSQRGDISGAGRI+ATMQF+G  PSLESC LLVETYG AGDPDQARNNFDYMIKIGHRPD RCTASMVA
Subjt:  GQPKLGESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVA

Query:  AYGKKNLLDKALNLLLQLEKNGFEPGVETYAALVDWLGKLQLVDEAEQLLGKIGAHRE
        AY KKNLLDKALNLLLQLEK+GFEPG  TYA L+DWLGKLQLVDEAEQ+LGKIGA  E
Subjt:  AYGKKNLLDKALNLLLQLEKNGFEPGVETYAALVDWLGKLQLVDEAEQLLGKIGAHRE

A0A6J1GID4 pentatricopeptide repeat-containing protein At1g19525-like4.4e-13294.21Show/hide
Query:  VKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPNEKVYNSMIMAFVNA
        +KVA+LLLNEE FETNIRDYSKLVDVHAKENRLEDAERILKMM+EKG+TPDILTATVLVHMYSKVGNLDRAKEAFDTLRS GFQP+EKVYNSMIMAFVNA
Subjt:  VKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPNEKVYNSMIMAFVNA

Query:  GQPKLGESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVA
        GQPKLGESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVETYGLAGDPDQARNNFDYMIKIGHRPD  CTASMVA
Subjt:  GQPKLGESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVA

Query:  AYGKKNLLDKALNLLLQLEKNGFEPGVETYAALVDWLGKLQLVDEAEQLLGKIGAHREM
        AYG KNLLDKALNLLLQLEK+GFEPGVETYAALVDWLGKLQLVDEAEQLLGKIGA  ++
Subjt:  AYGKKNLLDKALNLLLQLEKNGFEPGVETYAALVDWLGKLQLVDEAEQLLGKIGAHREM

A0A6J1HDE2 putative pentatricopeptide repeat-containing protein At2g021503.3e-12791.37Show/hide
Query:  VKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPNEKVYNSMIMAFVNA
        +KVAELLL+EESF+T+IRDYSKLVDVHAKENRLEDAERILK MNEKG+TPDILTA+VLVHMYSKVGNLDRAKEAFDTLRSHGFQP+EKVYNSMIMAFVNA
Subjt:  VKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPNEKVYNSMIMAFVNA

Query:  GQPKLGESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVA
        GQPKLGES+MREMEARDIKPS+DIYMALLRSFSQRGDISGAGRI+ATMQF+G SPSLESC LLVE YG AGDPDQARNNFDYMIKIGHRPD RCTASMVA
Subjt:  GQPKLGESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVA

Query:  AYGKKNLLDKALNLLLQLEKNGFEPGVETYAALVDWLGKLQLVDEAEQLLGKIGA
        AY KKNLLDKALNLLLQLEK+GFEPGV TYA LVDWLGKLQLVDEAEQ+LGKIGA
Subjt:  AYGKKNLLDKALNLLLQLEKNGFEPGVETYAALVDWLGKLQLVDEAEQLLGKIGA

A0A6J1K9D9 putative pentatricopeptide repeat-containing protein At2g021502.3e-12892.16Show/hide
Query:  VKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPNEKVYNSMIMAFVNA
        +KVAELLL+EESF+TNIRDYSKLVDVHAKENRLEDAERILK MNEKG+TPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQP+EKVYNSMIMAFVN+
Subjt:  VKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPNEKVYNSMIMAFVNA

Query:  GQPKLGESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVA
        GQPKLGES+MREMEARDIKPSKDIYMALLRSFSQRGDISGAGRI+ATMQF+G SPSLESC LLVE YG AGDPDQARNNFDYMIKIGHRPD RCTASMVA
Subjt:  GQPKLGESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVA

Query:  AYGKKNLLDKALNLLLQLEKNGFEPGVETYAALVDWLGKLQLVDEAEQLLGKIGA
        AY KKNLLDKALNLLLQLEK+GFEPGV TYA LVDWLGKLQLVDEAEQ+LGKIGA
Subjt:  AYGKKNLLDKALNLLLQLEKNGFEPGVETYAALVDWLGKLQLVDEAEQLLGKIGA

A0A6J1KKS4 putative pentatricopeptide repeat-containing protein At2g021509.5e-13597.25Show/hide
Query:  VKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPNEKVYNSMIMAFVNA
        +KVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMM EKG+TPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQP+EKVYNSMIMAFVNA
Subjt:  VKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPNEKVYNSMIMAFVNA

Query:  GQPKLGESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVA
        GQPKLGESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESC LLVETYGLAGDPDQARNNFDYMIKIGHRPD RCTASMVA
Subjt:  GQPKLGESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVA

Query:  AYGKKNLLDKALNLLLQLEKNGFEPGVETYAALVDWLGKLQLVDEAEQLLGKIGA
        AYGKKNLLDKALNLLLQLEK+GFEPGVETYAALVDWLGKLQLVDEAEQLLGKIGA
Subjt:  AYGKKNLLDKALNLLLQLEKNGFEPGVETYAALVDWLGKLQLVDEAEQLLGKIGA

SwissProt top hitse value%identityAlignment
Q0WVK7 Pentatricopeptide repeat-containing protein At1g05670, mitochondrial1.5e-2327.2Show/hide
Query:  LLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPNEKVYNSMIMAFVNAGQPKL
        LL+  + +  ++  YS +V+ + +   L+   +++++M  KGL P+      ++ +  ++  L  A+EAF  +   G  P+  VY ++I  F   G  + 
Subjt:  LLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPNEKVYNSMIMAFVNAGQPKL

Query:  GESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVAAYGKK
              EM +RDI P    Y A++  F Q GD+  AG++   M   G+ P   +   L+  Y  AG    A    ++MI+ G  P+     +++    K+
Subjt:  GESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVAAYGKK

Query:  NLLDKALNLLLQLEKNGFEPGVETYAALVDWLGKLQLVDEAEQLLGKIGA
          LD A  LL ++ K G +P + TY ++V+ L K   ++EA +L+G+  A
Subjt:  NLLDKALNLLLQLEKNGFEPGVETYAALVDWLGKLQLVDEAEQLLGKIGA

Q940Z1 Pentatricopeptide repeat-containing protein At1g195251.2e-6556.6Show/hide
Query:  MNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPNEKVYNSMIMAFVNAGQPKLGESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAG
        M++ G+ PDILTAT LVHMYSK GN +RA EAF+ L+S+G +P+EK+Y +MI+ +VNAG+PKLGE +M+EM+A+++K S+++YMALLR+++Q GD +GA 
Subjt:  MNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPNEKVYNSMIMAFVNAGQPKLGESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAG

Query:  RIAATMQFSGISP-SLESCILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVAAYGKKNLLDKALNLLLQLEKNGFEPGVETYAALVDWLGKLQ
         I+++MQ++   P S E+  L VE YG AG  D+A++NFD M K+GH+PD +C A++V AY  +N LDKAL LLLQLEK+G E GV TY  LVDW+  L 
Subjt:  RIAATMQFSGISP-SLESCILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVAAYGKKNLLDKALNLLLQLEKNGFEPGVETYAALVDWLGKLQ

Query:  LVDEAEQLLGKI
        L++EAEQLL KI
Subjt:  LVDEAEQLLGKI

Q9LPC4 Pentatricopeptide repeat-containing protein At1g019702.6e-4940.8Show/hide
Query:  VKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPNEKVYNSMIMAFVNA
        +KVAE  L ++SFE N RDY+K++  + K N++EDAER L  M  +G   D +T T +V +YSK G    A+E F+ ++  G   + + Y SMIMA++ A
Subjt:  VKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPNEKVYNSMIMAFVNA

Query:  GQPKLGESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVA
        G P+ GES++REM++++I   +++Y ALLR +S  GD  GA R+   +Q +GI+P ++ C LL+  Y ++G    AR  F+ M K G +   +C A ++A
Subjt:  GQPKLGESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVA

Query:  AYGKKNLLDKALNLLLQLEKNGFEPGVETYAALVDWLGKLQLVDEAEQLL
        AY K+  L++AL  L++LEK+    G E  A L  W  KL +V+E E LL
Subjt:  AYGKKNLLDKALNLLLQLEKNGFEPGVETYAALVDWLGKLQLVDEAEQLL

Q9LSL9 Pentatricopeptide repeat-containing protein At5g655605.6e-2325.62Show/hide
Query:  YSKLVDVHAKENRLEDAERILKMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPNEKVYNSMIMAFVNAGQPKLGESMMREMEARDIK
        Y+ L+D   +    + A R+L +MN++GL PD  T T ++    K   ++ A + FD+L   G  PN  +Y ++I  +  AG+      M+ +M +++  
Subjt:  YSKLVDVHAKENRLEDAERILKMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPNEKVYNSMIMAFVNAGQPKLGESMMREMEARDIK

Query:  PSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVAAYGKKNLLDKALNLLLQLE
        P+   + AL+      G +  A  +   M   G+ P++ +  +L+      GD D A + F  M+  G +PDA    + +  Y ++  L  A +++ ++ 
Subjt:  PSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVAAYGKKNLLDKALNLLLQLE

Query:  KNGFEPGVETYAALVDWLGKLQLVDEAEQLLGKIGAHREMSC
        +NG  P + TY++L+   G L   + A  +L ++   R+  C
Subjt:  KNGFEPGVETYAALVDWLGKLQLVDEAEQLLGKIGAHREMSC

Q9T0D6 Pentatricopeptide repeat-containing protein At4g116903.5e-2526.83Show/hide
Query:  LNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPNEKVYNSMIMAFVNAGQPKLGE
        + E     NI  Y+ L+    +E +L +A +++  M   G+ P+++T   L+  +  VG L +A      L+S G  P+   YN ++  F   G      
Subjt:  LNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPNEKVYNSMIMAFVNAGQPKLGE

Query:  SMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVAAYGKKNL
         M++EME R IKPSK  Y  L+ +F++  ++  A ++  +M+  G+ P + +  +L+  + + G  ++A   F  M++    P+     +M+  Y K+  
Subjt:  SMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVAAYGKKNL

Query:  LDKALNLLLQLEKNGFEPGVETYAALVDWLGKLQLVDEAEQLLGKI
          +AL LL ++E+    P V +Y  +++ L K +   EAE+L+ K+
Subjt:  LDKALNLLLQLEKNGFEPGVETYAALVDWLGKLQLVDEAEQLLGKI

Arabidopsis top hitse value%identityAlignment
AT1G01970.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.9e-5040.8Show/hide
Query:  VKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPNEKVYNSMIMAFVNA
        +KVAE  L ++SFE N RDY+K++  + K N++EDAER L  M  +G   D +T T +V +YSK G    A+E F+ ++  G   + + Y SMIMA++ A
Subjt:  VKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPNEKVYNSMIMAFVNA

Query:  GQPKLGESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVA
        G P+ GES++REM++++I   +++Y ALLR +S  GD  GA R+   +Q +GI+P ++ C LL+  Y ++G    AR  F+ M K G +   +C A ++A
Subjt:  GQPKLGESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVA

Query:  AYGKKNLLDKALNLLLQLEKNGFEPGVETYAALVDWLGKLQLVDEAEQLL
        AY K+  L++AL  L++LEK+    G E  A L  W  KL +V+E E LL
Subjt:  AYGKKNLLDKALNLLLQLEKNGFEPGVETYAALVDWLGKLQLVDEAEQLL

AT1G05670.1 Pentatricopeptide repeat (PPR-like) superfamily protein1.0e-2427.2Show/hide
Query:  LLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPNEKVYNSMIMAFVNAGQPKL
        LL+  + +  ++  YS +V+ + +   L+   +++++M  KGL P+      ++ +  ++  L  A+EAF  +   G  P+  VY ++I  F   G  + 
Subjt:  LLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPNEKVYNSMIMAFVNAGQPKL

Query:  GESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVAAYGKK
              EM +RDI P    Y A++  F Q GD+  AG++   M   G+ P   +   L+  Y  AG    A    ++MI+ G  P+     +++    K+
Subjt:  GESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVAAYGKK

Query:  NLLDKALNLLLQLEKNGFEPGVETYAALVDWLGKLQLVDEAEQLLGKIGA
          LD A  LL ++ K G +P + TY ++V+ L K   ++EA +L+G+  A
Subjt:  NLLDKALNLLLQLEKNGFEPGVETYAALVDWLGKLQLVDEAEQLLGKIGA

AT1G05670.2 Pentatricopeptide repeat (PPR-like) superfamily protein1.0e-2427.2Show/hide
Query:  LLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPNEKVYNSMIMAFVNAGQPKL
        LL+  + +  ++  YS +V+ + +   L+   +++++M  KGL P+      ++ +  ++  L  A+EAF  +   G  P+  VY ++I  F   G  + 
Subjt:  LLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPNEKVYNSMIMAFVNAGQPKL

Query:  GESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVAAYGKK
              EM +RDI P    Y A++  F Q GD+  AG++   M   G+ P   +   L+  Y  AG    A    ++MI+ G  P+     +++    K+
Subjt:  GESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVAAYGKK

Query:  NLLDKALNLLLQLEKNGFEPGVETYAALVDWLGKLQLVDEAEQLLGKIGA
          LD A  LL ++ K G +P + TY ++V+ L K   ++EA +L+G+  A
Subjt:  NLLDKALNLLLQLEKNGFEPGVETYAALVDWLGKLQLVDEAEQLLGKIGA

AT1G19520.1 pentatricopeptide (PPR) repeat-containing protein5.4e-8257.48Show/hide
Query:  VKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPNEKVYNSMIMAFVNA
        +KVAE +L+E+SF  +I DYSKL+ +HAKEN +ED ERILK M++ G+ PDILTAT LVHMYSK GN +RA EAF+ L+S+G +P+EK+Y +MI+ +VNA
Subjt:  VKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPNEKVYNSMIMAFVNA

Query:  GQPKLGESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISP-SLESCILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMV
        G+PKLGE +M+EM+A+++K S+++YMALLR+++Q GD +GA  I+++MQ++   P S E+  L VE YG AG  D+A++NFD M K+GH+PD +C A++V
Subjt:  GQPKLGESMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISP-SLESCILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMV

Query:  AAYGKKNLLDKALNLLLQLEKNGFEPGVETYAALVDWLGKLQLVDEAEQLLGKI
         AY  +N LDKAL LLLQLEK+G E GV TY  LVDW+  L L++EAEQLL KI
Subjt:  AAYGKKNLLDKALNLLLQLEKNGFEPGVETYAALVDWLGKLQLVDEAEQLLGKI

AT4G11690.1 Pentatricopeptide repeat (PPR-like) superfamily protein2.5e-2626.83Show/hide
Query:  LNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPNEKVYNSMIMAFVNAGQPKLGE
        + E     NI  Y+ L+    +E +L +A +++  M   G+ P+++T   L+  +  VG L +A      L+S G  P+   YN ++  F   G      
Subjt:  LNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPNEKVYNSMIMAFVNAGQPKLGE

Query:  SMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVAAYGKKNL
         M++EME R IKPSK  Y  L+ +F++  ++  A ++  +M+  G+ P + +  +L+  + + G  ++A   F  M++    P+     +M+  Y K+  
Subjt:  SMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVAAYGKKNL

Query:  LDKALNLLLQLEKNGFEPGVETYAALVDWLGKLQLVDEAEQLLGKI
          +AL LL ++E+    P V +Y  +++ L K +   EAE+L+ K+
Subjt:  LDKALNLLLQLEKNGFEPGVETYAALVDWLGKLQLVDEAEQLLGKI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGGTGTTAAGGTAGCAGAGCTTCTTTTGAATGAAGAATCGTTCGAGACCAACATCCGTGACTACTCTAAGCTTGTCGATGTCCATGCTAAAGAGAATCGTCTAGA
GGATGCTGAGAGGATTCTTAAGATGATGAATGAGAAAGGCCTTACACCGGACATTTTAACAGCCACAGTTTTGGTTCATATGTATAGCAAGGTGGGAAATCTCGATCGTG
CAAAGGAAGCGTTTGATACATTGAGGAGTCACGGCTTCCAACCCAATGAGAAGGTTTATAATTCCATGATAATGGCGTTTGTGAACGCTGGACAACCGAAGTTGGGCGAA
TCGATGATGAGAGAAATGGAAGCAAGGGACATTAAACCAAGCAAGGATATTTACATGGCATTGCTAAGGTCATTTTCGCAACGTGGTGATATCAGTGGCGCTGGAAGAAT
TGCTGCAACGATGCAATTTTCTGGCATCTCGCCAAGTTTGGAGTCGTGTATATTACTAGTTGAGACATATGGGCTAGCTGGTGATCCTGATCAGGCAAGGAACAATTTTG
ACTACATGATAAAAATCGGGCACAGGCCTGATGCCAGGTGCACTGCAAGTATGGTTGCAGCCTATGGAAAGAAGAACCTGTTGGACAAGGCTCTGAATCTTTTACTACAG
CTTGAAAAGAATGGGTTTGAGCCAGGGGTTGAAACTTATGCTGCTCTTGTAGATTGGTTAGGTAAGTTGCAGCTGGTTGACGAAGCTGAGCAGCTATTAGGCAAGATCGG
CGCGCACAGGGAGATGTCATGCCTCTTAAGGTTCATATTAGCCTCTGTGATATGTACTCAAGAGCTGGGGTCGAGAAAAAGGCGCTACCAGCGCTCGGGGTATTGTTATA
GCTGGTGGCTTTGTGCAGGATGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGGTGTTAAGGTAGCAGAGCTTCTTTTGAATGAAGAATCGTTCGAGACCAACATCCGTGACTACTCTAAGCTTGTCGATGTCCATGCTAAAGAGAATCGTCTAGA
GGATGCTGAGAGGATTCTTAAGATGATGAATGAGAAAGGCCTTACACCGGACATTTTAACAGCCACAGTTTTGGTTCATATGTATAGCAAGGTGGGAAATCTCGATCGTG
CAAAGGAAGCGTTTGATACATTGAGGAGTCACGGCTTCCAACCCAATGAGAAGGTTTATAATTCCATGATAATGGCGTTTGTGAACGCTGGACAACCGAAGTTGGGCGAA
TCGATGATGAGAGAAATGGAAGCAAGGGACATTAAACCAAGCAAGGATATTTACATGGCATTGCTAAGGTCATTTTCGCAACGTGGTGATATCAGTGGCGCTGGAAGAAT
TGCTGCAACGATGCAATTTTCTGGCATCTCGCCAAGTTTGGAGTCGTGTATATTACTAGTTGAGACATATGGGCTAGCTGGTGATCCTGATCAGGCAAGGAACAATTTTG
ACTACATGATAAAAATCGGGCACAGGCCTGATGCCAGGTGCACTGCAAGTATGGTTGCAGCCTATGGAAAGAAGAACCTGTTGGACAAGGCTCTGAATCTTTTACTACAG
CTTGAAAAGAATGGGTTTGAGCCAGGGGTTGAAACTTATGCTGCTCTTGTAGATTGGTTAGGTAAGTTGCAGCTGGTTGACGAAGCTGAGCAGCTATTAGGCAAGATCGG
CGCGCACAGGGAGATGTCATGCCTCTTAAGGTTCATATTAGCCTCTGTGATATGTACTCAAGAGCTGGGGTCGAGAAAAAGGCGCTACCAGCGCTCGGGGTATTGTTATA
GCTGGTGGCTTTGTGCAGGATGCTAA
Protein sequenceShow/hide protein sequence
MSGVKVAELLLNEESFETNIRDYSKLVDVHAKENRLEDAERILKMMNEKGLTPDILTATVLVHMYSKVGNLDRAKEAFDTLRSHGFQPNEKVYNSMIMAFVNAGQPKLGE
SMMREMEARDIKPSKDIYMALLRSFSQRGDISGAGRIAATMQFSGISPSLESCILLVETYGLAGDPDQARNNFDYMIKIGHRPDARCTASMVAAYGKKNLLDKALNLLLQ
LEKNGFEPGVETYAALVDWLGKLQLVDEAEQLLGKIGAHREMSCLLRFILASVICTQELGSRKRRYQRSGYCYSWWLCAGC