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Carg04047 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04047
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProtein RER1B-like
Genome locationCarg_Chr12:2784613..2785599
RNA-Seq ExpressionCarg04047
SyntenyCarg04047
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585591.1 hypothetical protein SDJN03_18324, partial [Cucurbita argyrosperma subsp. sororia]2.2e-55100Show/hide
Query:  MTPRAYVLIFFFWSLLTVLTPALVFLSESSKTSSLSSQSPDGKIVGIQMSRKLVGLTRKYETLKVLAEEQTSPAPIPTPITAPAPSPSPSPSTALPPGTA
        MTPRAYVLIFFFWSLLTVLTPALVFLSESSKTSSLSSQSPDGKIVGIQMSRKLVGLTRKYETLKVLAEEQTSPAPIPTPITAPAPSPSPSPSTALPPGTA
Subjt:  MTPRAYVLIFFFWSLLTVLTPALVFLSESSKTSSLSSQSPDGKIVGIQMSRKLVGLTRKYETLKVLAEEQTSPAPIPTPITAPAPSPSPSPSTALPPGTA

Query:  VPLRRFIAGAGKVIETTLKGLSIV
        VPLRRFIAGAGKVIETTLKGLSIV
Subjt:  VPLRRFIAGAGKVIETTLKGLSIV

XP_011649628.1 uncharacterized protein LOC105434646 [Cucumis sativus]3.4e-3270.25Show/hide
Query:  MTPRAYVLIFFFWSLLTVLTPALVFLSESSKTSSLSSQSPDGKIVGIQMSRKLVGLTRKYETLKVLAEEQTSPAPIPTPITAPAPSPSPSPSTALPPGTA
        MTPRAYVLIFFFWSLLT+LTPALVFLSE+SK S LS +S DGK  GI+MSRK+VGLTRKY+ LK+LAEEQ +P  IPTPITAPAPSP+P+P+        
Subjt:  MTPRAYVLIFFFWSLLTVLTPALVFLSESSKTSSLSSQSPDGKIVGIQMSRKLVGLTRKYETLKVLAEEQTSPAPIPTPITAPAPSPSPSPSTALPPGTA

Query:  VPLRRFIAGAGKVIETTLKGL
         P+RRF+A AG+VI  TLKGL
Subjt:  VPLRRFIAGAGKVIETTLKGL

XP_022951682.1 uncharacterized protein LOC111454425 [Cucurbita moschata]5.6e-5192.74Show/hide
Query:  MTPRAYVLIFFFWSLLTVLTPALVFLSESSKTSSLSSQSPDGKIVGIQMSRKLVGLTRKYETLKVLAEEQTSPAPIPTPITAPAPSPSPSPSTALPPGTA
        MTPR YVLIFFFWSLLTVLTPALVFLSESSKTSS SSQSPDGKIVGIQMSRK+VGLTRKYE LKVLAEEQTSPA IPTPITAPAP+PSPSPSTALPPGTA
Subjt:  MTPRAYVLIFFFWSLLTVLTPALVFLSESSKTSSLSSQSPDGKIVGIQMSRKLVGLTRKYETLKVLAEEQTSPAPIPTPITAPAPSPSPSPSTALPPGTA

Query:  VPLRRFIAGAGKVIETTLKGLSIV
        VPLRRF+AGAGKV+ETTL+GLSIV
Subjt:  VPLRRFIAGAGKVIETTLKGLSIV

XP_023002554.1 uncharacterized protein LOC111496365 [Cucurbita maxima]1.4e-4688.71Show/hide
Query:  MTPRAYVLIFFFWSLLTVLTPALVFLSESSKTSSLSSQSPDGKIVGIQMSRKLVGLTRKYETLKVLAEEQTSPAPIPTPITAPAPSPSPSPSTALPPGTA
        MTPRAYVLIFFFWSLLT+LTPALVFLSE+SKTSSLSSQSPDGKI GIQMSRK+VGLTRKYE LKVL EEQTSPA IPTPITAPA    P+PSTALPPGTA
Subjt:  MTPRAYVLIFFFWSLLTVLTPALVFLSESSKTSSLSSQSPDGKIVGIQMSRKLVGLTRKYETLKVLAEEQTSPAPIPTPITAPAPSPSPSPSTALPPGTA

Query:  VPLRRFIAGAGKVIETTLKGLSIV
        VPLRRF+AGAGKVI TTLKGLSIV
Subjt:  VPLRRFIAGAGKVIETTLKGLSIV

XP_038885597.1 uncharacterized protein LOC120075920 [Benincasa hispida]5.2e-3372.73Show/hide
Query:  MTPRAYVLIFFFWSLLTVLTPALVFLSESSKTSSLSSQSPDGKIVGIQMSRKLVGLTRKYETLKVLAEEQTSPAPIPTPITAPAPSPSPSPSTALPPGTA
        MTPRAYVLIFFFWSLLT+LTPALVFLS++SK SSLS +S DGK  GI+MSRK+VGLTRKY+ LKVLAEEQT+PA IPTPITAPA SP+P+       G A
Subjt:  MTPRAYVLIFFFWSLLTVLTPALVFLSESSKTSSLSSQSPDGKIVGIQMSRKLVGLTRKYETLKVLAEEQTSPAPIPTPITAPAPSPSPSPSTALPPGTA

Query:  VPLRRFIAGAGKVIETTLKGL
        V +R+F+A  GKVI TTLKGL
Subjt:  VPLRRFIAGAGKVIETTLKGL

TrEMBL top hitse value%identityAlignment
A0A0A0LNM8 Uncharacterized protein1.6e-3270.25Show/hide
Query:  MTPRAYVLIFFFWSLLTVLTPALVFLSESSKTSSLSSQSPDGKIVGIQMSRKLVGLTRKYETLKVLAEEQTSPAPIPTPITAPAPSPSPSPSTALPPGTA
        MTPRAYVLIFFFWSLLT+LTPALVFLSE+SK S LS +S DGK  GI+MSRK+VGLTRKY+ LK+LAEEQ +P  IPTPITAPAPSP+P+P+        
Subjt:  MTPRAYVLIFFFWSLLTVLTPALVFLSESSKTSSLSSQSPDGKIVGIQMSRKLVGLTRKYETLKVLAEEQTSPAPIPTPITAPAPSPSPSPSTALPPGTA

Query:  VPLRRFIAGAGKVIETTLKGL
         P+RRF+A AG+VI  TLKGL
Subjt:  VPLRRFIAGAGKVIETTLKGL

A0A1S3BAZ8 uncharacterized protein LOC1034879772.8e-3270.25Show/hide
Query:  MTPRAYVLIFFFWSLLTVLTPALVFLSESSKTSSLSSQSPDGKIVGIQMSRKLVGLTRKYETLKVLAEEQTSPAPIPTPITAPAPSPSPSPSTALPPGTA
        MTPRAYVLIFFFWSLLT+LTPALVFLSE+SK S +S +S DG+  GI+MSRK+VGLTRKY+ LK+LAEEQ +P  IPTPITAPAPSP+P    A  PG A
Subjt:  MTPRAYVLIFFFWSLLTVLTPALVFLSESSKTSSLSSQSPDGKIVGIQMSRKLVGLTRKYETLKVLAEEQTSPAPIPTPITAPAPSPSPSPSTALPPGTA

Query:  VPLRRFIAGAGKVIETTLKGL
        VP+ RF+A A K+I +TLKGL
Subjt:  VPLRRFIAGAGKVIETTLKGL

A0A5A7VFX0 Uncharacterized protein2.8e-3270.25Show/hide
Query:  MTPRAYVLIFFFWSLLTVLTPALVFLSESSKTSSLSSQSPDGKIVGIQMSRKLVGLTRKYETLKVLAEEQTSPAPIPTPITAPAPSPSPSPSTALPPGTA
        MTPRAYVLIFFFWSLLT+LTPALVFLSE+SK S +S +S DG+  GI+MSRK+VGLTRKY+ LK+LAEEQ +P  IPTPITAPAPSP+P    A  PG A
Subjt:  MTPRAYVLIFFFWSLLTVLTPALVFLSESSKTSSLSSQSPDGKIVGIQMSRKLVGLTRKYETLKVLAEEQTSPAPIPTPITAPAPSPSPSPSTALPPGTA

Query:  VPLRRFIAGAGKVIETTLKGL
        VP+ RF+A A K+I +TLKGL
Subjt:  VPLRRFIAGAGKVIETTLKGL

A0A6J1GIC5 uncharacterized protein LOC1114544252.7e-5192.74Show/hide
Query:  MTPRAYVLIFFFWSLLTVLTPALVFLSESSKTSSLSSQSPDGKIVGIQMSRKLVGLTRKYETLKVLAEEQTSPAPIPTPITAPAPSPSPSPSTALPPGTA
        MTPR YVLIFFFWSLLTVLTPALVFLSESSKTSS SSQSPDGKIVGIQMSRK+VGLTRKYE LKVLAEEQTSPA IPTPITAPAP+PSPSPSTALPPGTA
Subjt:  MTPRAYVLIFFFWSLLTVLTPALVFLSESSKTSSLSSQSPDGKIVGIQMSRKLVGLTRKYETLKVLAEEQTSPAPIPTPITAPAPSPSPSPSTALPPGTA

Query:  VPLRRFIAGAGKVIETTLKGLSIV
        VPLRRF+AGAGKV+ETTL+GLSIV
Subjt:  VPLRRFIAGAGKVIETTLKGLSIV

A0A6J1KQS2 uncharacterized protein LOC1114963656.9e-4788.71Show/hide
Query:  MTPRAYVLIFFFWSLLTVLTPALVFLSESSKTSSLSSQSPDGKIVGIQMSRKLVGLTRKYETLKVLAEEQTSPAPIPTPITAPAPSPSPSPSTALPPGTA
        MTPRAYVLIFFFWSLLT+LTPALVFLSE+SKTSSLSSQSPDGKI GIQMSRK+VGLTRKYE LKVL EEQTSPA IPTPITAPA    P+PSTALPPGTA
Subjt:  MTPRAYVLIFFFWSLLTVLTPALVFLSESSKTSSLSSQSPDGKIVGIQMSRKLVGLTRKYETLKVLAEEQTSPAPIPTPITAPAPSPSPSPSTALPPGTA

Query:  VPLRRFIAGAGKVIETTLKGLSIV
        VPLRRF+AGAGKVI TTLKGLSIV
Subjt:  VPLRRFIAGAGKVIETTLKGLSIV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCCCTCGAGCCTATGTTTTAATCTTCTTCTTCTGGTCTCTCCTCACGGTTCTCACTCCCGCCCTCGTTTTCCTCTCCGAGAGTTCAAAAACGTCGTCCCTCTCGTC
CCAATCTCCAGATGGGAAAATCGTAGGGATTCAAATGAGTAGAAAACTTGTGGGATTGACCAGAAAATATGAGACGTTGAAAGTTTTGGCAGAAGAACAGACCTCACCGG
CGCCGATCCCAACACCAATTACAGCACCGGCGCCGTCGCCGTCACCGTCGCCATCGACTGCTCTGCCTCCGGGAACCGCCGTGCCGTTACGGAGGTTCATTGCTGGTGCT
GGAAAGGTCATAGAGACGACGTTGAAGGGTCTGAGTATTGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGACCCCTCGAGCCTATGTTTTAATCTTCTTCTTCTGGTCTCTCCTCACGGTTCTCACTCCCGCCCTCGTTTTCCTCTCCGAGAGTTCAAAAACGTCGTCCCTCTCGTC
CCAATCTCCAGATGGGAAAATCGTAGGGATTCAAATGAGTAGAAAACTTGTGGGATTGACCAGAAAATATGAGACGTTGAAAGTTTTGGCAGAAGAACAGACCTCACCGG
CGCCGATCCCAACACCAATTACAGCACCGGCGCCGTCGCCGTCACCGTCGCCATCGACTGCTCTGCCTCCGGGAACCGCCGTGCCGTTACGGAGGTTCATTGCTGGTGCT
GGAAAGGTCATAGAGACGACGTTGAAGGGTCTGAGTATTGTATGA
Protein sequenceShow/hide protein sequence
MTPRAYVLIFFFWSLLTVLTPALVFLSESSKTSSLSSQSPDGKIVGIQMSRKLVGLTRKYETLKVLAEEQTSPAPIPTPITAPAPSPSPSPSTALPPGTAVPLRRFIAGA
GKVIETTLKGLSIV