; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg04057 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04057
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionZinc finger and BTB domain-containing protein 47
Genome locationCarg_Chr12:2839182..2839535
RNA-Seq ExpressionCarg04057
SyntenyCarg04057
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065239.1 zinc finger and BTB domain-containing protein 47 [Cucumis melo var. makuwa]1.1e-2468.55Show/hide
Query:  MGKKKTQKTKQISVAIAETSTSKLPDDGGAHGGGQSVQPRKRGRPRKVLDE---PPDDKKLPPPP---ADVADKPLQKKGKSTGDE-PPDSMEGASKQHE
        MGKKKTQKTK+I+VAIAETSTSKL DD    G GQS+QPRKRGRPRKVLDE     ++KKLPPPP    +V + P +KK K+T DE PP S++  SKQ  
Subjt:  MGKKKTQKTKQISVAIAETSTSKLPDDGGAHGGGQSVQPRKRGRPRKVLDE---PPDDKKLPPPP---ADVADKPLQKKGKSTGDE-PPDSMEGASKQHE

Query:  SEEPKSGDGSRSRGRRKNKPRKSS
         EEPK+GDGSRSRGRRKNKPRKSS
Subjt:  SEEPKSGDGSRSRGRRKNKPRKSS

KAG6585603.1 hypothetical protein SDJN03_18336, partial [Cucurbita argyrosperma subsp. sororia]7.9e-31100Show/hide
Query:  MGKKKTQKTKQISVAIAETSTSKLPDDGGAHGGGQSVQPRKRGRPRKVLDEPPDDKKLPPPPADVADKPLQKKG
        MGKKKTQKTKQISVAIAETSTSKLPDDGGAHGGGQSVQPRKRGRPRKVLDEPPDDKKLPPPPADVADKPLQKKG
Subjt:  MGKKKTQKTKQISVAIAETSTSKLPDDGGAHGGGQSVQPRKRGRPRKVLDEPPDDKKLPPPPADVADKPLQKKG

KAG7020516.1 hypothetical protein SDJN02_17201, partial [Cucurbita argyrosperma subsp. argyrosperma]9.6e-53100Show/hide
Query:  MGKKKTQKTKQISVAIAETSTSKLPDDGGAHGGGQSVQPRKRGRPRKVLDEPPDDKKLPPPPADVADKPLQKKGKSTGDEPPDSMEGASKQHESEEPKSG
        MGKKKTQKTKQISVAIAETSTSKLPDDGGAHGGGQSVQPRKRGRPRKVLDEPPDDKKLPPPPADVADKPLQKKGKSTGDEPPDSMEGASKQHESEEPKSG
Subjt:  MGKKKTQKTKQISVAIAETSTSKLPDDGGAHGGGQSVQPRKRGRPRKVLDEPPDDKKLPPPPADVADKPLQKKGKSTGDEPPDSMEGASKQHESEEPKSG

Query:  DGSRSRGRRKNKPRKSS
        DGSRSRGRRKNKPRKSS
Subjt:  DGSRSRGRRKNKPRKSS

XP_023002541.1 uncharacterized protein LOC111496353 [Cucurbita maxima]6.0e-4794.07Show/hide
Query:  MGKKKTQKTKQISVAIAETSTSKLPDDGGAHGGGQSVQPRKRGRPRKVLDEPPDDKK-LPPPPADVADKPLQKKGKSTGDEPPDSMEGASKQHESEEPKS
        MGKKKTQKTKQISVAIAETSTSKLPDDGG HGGGQS QPRKRGRPRKVLDEPPDDKK LPPP ADVADKPLQKKGK+TGDEPP SMEGASKQ ESEEPKS
Subjt:  MGKKKTQKTKQISVAIAETSTSKLPDDGGAHGGGQSVQPRKRGRPRKVLDEPPDDKK-LPPPPADVADKPLQKKGKSTGDEPPDSMEGASKQHESEEPKS

Query:  GDGSRSRGRRKNKPRKSS
        GDGSRSRGRRKNKPRKSS
Subjt:  GDGSRSRGRRKNKPRKSS

XP_023537340.1 uncharacterized protein LOC111798433 [Cucurbita pepo subsp. pepo]3.8e-4996.61Show/hide
Query:  MGKKKTQKTKQISVAIAETSTSKLPDDGGAHGGGQSVQPRKRGRPRKVLDEPPDDKK-LPPPPADVADKPLQKKGKSTGDEPPDSMEGASKQHESEEPKS
        MGKKKTQKTKQISVAIAE STSKLPDDGG HGGGQSVQPRKRGRPRKVLDEPPDDKK LPPPPADVADKPLQKKGKSTGDEPP SMEGASKQHESEEPKS
Subjt:  MGKKKTQKTKQISVAIAETSTSKLPDDGGAHGGGQSVQPRKRGRPRKVLDEPPDDKK-LPPPPADVADKPLQKKGKSTGDEPPDSMEGASKQHESEEPKS

Query:  GDGSRSRGRRKNKPRKSS
        GDGSRSRGRRKNKPRKSS
Subjt:  GDGSRSRGRRKNKPRKSS

TrEMBL top hitse value%identityAlignment
A0A0A0LRH2 Uncharacterized protein7.2e-2266.12Show/hide
Query:  MGKKKTQKTKQISVAIAETSTSKLPDDGGAHGGGQSVQPRKRGRPRKVLDEPPDD---KKLPPPPADVADKPLQKKGKSTGDEPP-DSMEGASKQHESEE
        MGKKKTQKTK+I+VAIAETSTSKL DDG     GQ +QPRKRGRPRKVL+E  ++   KK PPP  +VA+ P +KK K T DE    SM   SK+   EE
Subjt:  MGKKKTQKTKQISVAIAETSTSKLPDDGGAHGGGQSVQPRKRGRPRKVLDEPPDD---KKLPPPPADVADKPLQKKGKSTGDEPP-DSMEGASKQHESEE

Query:  PKSGDGSRSRGRRKNKPRKSS
        PK+GDGSRSRGRRKNKPRKSS
Subjt:  PKSGDGSRSRGRRKNKPRKSS

A0A251R9L0 Uncharacterized protein4.0e-0438.69Show/hide
Query:  MGKKKTQKTKQISVAIAETSTSKLPDDGGAHGGGQSVQPRKRGRPRKVLDEPPDDKKLPPPPADVADKPLQ------KKGKSTGDEPPDSMEGASKQHES
        MGKKK QKTK++SVAIAE  ++   D+G      Q   PRKRGRPRK++++    ++   P  + A    +      KK K+T DE     E   +    
Subjt:  MGKKKTQKTKQISVAIAETSTSKLPDDGGAHGGGQSVQPRKRGRPRKVLDEPPDDKKLPPPPADVADKPLQ------KKGKSTGDEPPDSMEGASKQHES

Query:  EEPKSG--------------DGSRSRGRRKNKPRKSS
        EEP S                 SRSR RRK+KPRKSS
Subjt:  EEPKSG--------------DGSRSRGRRKNKPRKSS

A0A5A7VIE6 Zinc finger and BTB domain-containing protein 475.3e-2568.55Show/hide
Query:  MGKKKTQKTKQISVAIAETSTSKLPDDGGAHGGGQSVQPRKRGRPRKVLDE---PPDDKKLPPPP---ADVADKPLQKKGKSTGDE-PPDSMEGASKQHE
        MGKKKTQKTK+I+VAIAETSTSKL DD    G GQS+QPRKRGRPRKVLDE     ++KKLPPPP    +V + P +KK K+T DE PP S++  SKQ  
Subjt:  MGKKKTQKTKQISVAIAETSTSKLPDDGGAHGGGQSVQPRKRGRPRKVLDE---PPDDKKLPPPP---ADVADKPLQKKGKSTGDE-PPDSMEGASKQHE

Query:  SEEPKSGDGSRSRGRRKNKPRKSS
         EEPK+GDGSRSRGRRKNKPRKSS
Subjt:  SEEPKSGDGSRSRGRRKNKPRKSS

A0A6J1KLK8 uncharacterized protein LOC1114963532.9e-4794.07Show/hide
Query:  MGKKKTQKTKQISVAIAETSTSKLPDDGGAHGGGQSVQPRKRGRPRKVLDEPPDDKK-LPPPPADVADKPLQKKGKSTGDEPPDSMEGASKQHESEEPKS
        MGKKKTQKTKQISVAIAETSTSKLPDDGG HGGGQS QPRKRGRPRKVLDEPPDDKK LPPP ADVADKPLQKKGK+TGDEPP SMEGASKQ ESEEPKS
Subjt:  MGKKKTQKTKQISVAIAETSTSKLPDDGGAHGGGQSVQPRKRGRPRKVLDEPPDDKK-LPPPPADVADKPLQKKGKSTGDEPPDSMEGASKQHESEEPKS

Query:  GDGSRSRGRRKNKPRKSS
        GDGSRSRGRRKNKPRKSS
Subjt:  GDGSRSRGRRKNKPRKSS

A0A7N2KSD2 Uncharacterized protein8.9e-0440Show/hide
Query:  MGKKKTQKTKQISVAIAETSTSKLPDDGGAHGGGQSVQPRKRGRPRKVLDEP-PDDKK------LPPPPADVADKPLQKKGKSTGDEPPDSME-------
        MGKKK QKTK++SVAIAE S +   D+G      QS  PRKRGRPRK++++P   DKK      +     D  ++   K+ K++ +E  +  +       
Subjt:  MGKKKTQKTKQISVAIAETSTSKLPDDGGAHGGGQSVQPRKRGRPRKVLDEP-PDDKK------LPPPPADVADKPLQKKGKSTGDEPPDSME-------

Query:  ---GASKQHESEE------PKSGDGSRSRGRRKNKPRKSS
           GASK+ E +       PK     RSR RRK+KPRKSS
Subjt:  ---GASKQHESEE------PKSGDGSRSRGRRKNKPRKSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAGAAGAAAACCCAGAAAACCAAGCAGATTTCAGTCGCCATAGCTGAAACCTCCACCTCCAAATTACCCGATGACGGCGGCGCCCACGGCGGCGGTCAATCTGT
ACAGCCTAGAAAGAGAGGCCGACCTCGTAAAGTTCTCGATGAGCCACCGGATGACAAGAAGCTACCACCGCCGCCGGCGGATGTTGCGGATAAGCCGCTGCAGAAGAAGG
GTAAATCCACCGGAGATGAGCCGCCGGATTCCATGGAAGGAGCTTCGAAGCAACATGAATCGGAAGAACCCAAATCAGGAGATGGATCGAGAAGCAGAGGAAGGAGGAAG
AACAAACCCAGAAAAAGTAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAAGAAGAAAACCCAGAAAACCAAGCAGATTTCAGTCGCCATAGCTGAAACCTCCACCTCCAAATTACCCGATGACGGCGGCGCCCACGGCGGCGGTCAATCTGT
ACAGCCTAGAAAGAGAGGCCGACCTCGTAAAGTTCTCGATGAGCCACCGGATGACAAGAAGCTACCACCGCCGCCGGCGGATGTTGCGGATAAGCCGCTGCAGAAGAAGG
GTAAATCCACCGGAGATGAGCCGCCGGATTCCATGGAAGGAGCTTCGAAGCAACATGAATCGGAAGAACCCAAATCAGGAGATGGATCGAGAAGCAGAGGAAGGAGGAAG
AACAAACCCAGAAAAAGTAGCTAA
Protein sequenceShow/hide protein sequence
MGKKKTQKTKQISVAIAETSTSKLPDDGGAHGGGQSVQPRKRGRPRKVLDEPPDDKKLPPPPADVADKPLQKKGKSTGDEPPDSMEGASKQHESEEPKSGDGSRSRGRRK
NKPRKSS