; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg04077 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04077
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionmediator of RNA polymerase II transcription subunit 18
Genome locationCarg_Chr12:2955697..2957884
RNA-Seq ExpressionCarg04077
SyntenyCarg04077
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0006369 - termination of RNA polymerase II transcription (biological process)
GO:0016592 - mediator complex (cellular component)
GO:0070847 - core mediator complex (cellular component)
GO:0003712 - transcription coregulator activity (molecular function)
InterPro domainsIPR019095 - Mediator complex, subunit Med18


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020536.1 Mediator of RNA polymerase II transcription subunit 18 [Cucurbita argyrosperma subsp. argyrosperma]3.6e-82100Show/hide
Query:  MCDLEQTEPLWTVKHIGGAMRGSGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFSFRFHRGTHITVTVSSVNKMLKLHSTDEAVPVTPGI
        MCDLEQTEPLWTVKHIGGAMRGSGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFSFRFHRGTHITVTVSSVNKMLKLHSTDEAVPVTPGI
Subjt:  MCDLEQTEPLWTVKHIGGAMRGSGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFSFRFHRGTHITVTVSSVNKMLKLHSTDEAVPVTPGI

Query:  QLVEVTAPATSENYSEVAGAVSTFCEYLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM
        QLVEVTAPATSENYSEVAGAVSTFCEYLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM
Subjt:  QLVEVTAPATSENYSEVAGAVSTFCEYLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM
XP_011649597.2 mediator of RNA polymerase II transcription subunit 18 isoform X1 [Cucumis sativus]1.4e-7895.09Show/hide
Query:  MCDLEQTEPLWTVKHIGGAMRGSGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFSFRFHRGTHITVTVSSVNKMLKLHSTDEAVPVTPGI
        +CDLEQ EP WTVKHIGGA+RG+GAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGF+FRFHRG HITVTVSSVNKMLKLHSTDEAVPVTPGI
Subjt:  MCDLEQTEPLWTVKHIGGAMRGSGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFSFRFHRGTHITVTVSSVNKMLKLHSTDEAVPVTPGI

Query:  QLVEVTAPATSENYSEVAGAVSTFCEYLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM
        QLVEVTAPATS+NYSEVAGAVSTFCEYLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM
Subjt:  QLVEVTAPATSENYSEVAGAVSTFCEYLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM
XP_022144379.1 mediator of RNA polymerase II transcription subunit 18 [Momordica charantia]2.2e-7996.32Show/hide
Query:  MCDLEQTEPLWTVKHIGGAMRGSGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFSFRFHRGTHITVTVSSVNKMLKLHSTDEAVPVTPGI
        +CDLEQ EP WTVKHIGGAMRG+GAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGF+FRFHRG HITVTVSSVNKMLKLHSTDEAVPVTPGI
Subjt:  MCDLEQTEPLWTVKHIGGAMRGSGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFSFRFHRGTHITVTVSSVNKMLKLHSTDEAVPVTPGI

Query:  QLVEVTAPATSENYSEVAGAVSTFCEYLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM
        QLVEVTAPATSENYSEVAGAVSTFCEYLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM
Subjt:  QLVEVTAPATSENYSEVAGAVSTFCEYLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM
XP_022951149.1 mediator of RNA polymerase II transcription subunit 18 [Cucurbita moschata]1.8e-8199.39Show/hide
Query:  MCDLEQTEPLWTVKHIGGAMRGSGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFSFRFHRGTHITVTVSSVNKMLKLHSTDEAVPVTPGI
        MCDLEQTEP WTVKHIGGAMRGSGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFSFRFHRGTHITVTVSSVNKMLKLHSTDEAVPVTPGI
Subjt:  MCDLEQTEPLWTVKHIGGAMRGSGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFSFRFHRGTHITVTVSSVNKMLKLHSTDEAVPVTPGI

Query:  QLVEVTAPATSENYSEVAGAVSTFCEYLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM
        QLVEVTAPATSENYSEVAGAVSTFCEYLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM
Subjt:  QLVEVTAPATSENYSEVAGAVSTFCEYLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM
XP_023002016.1 mediator of RNA polymerase II transcription subunit 18 [Cucurbita maxima]8.9e-8198.77Show/hide
Query:  MCDLEQTEPLWTVKHIGGAMRGSGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFSFRFHRGTHITVTVSSVNKMLKLHSTDEAVPVTPGI
        MCDLEQTEP WTVKHIGGAMRGSGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFSFRFHRGTHITVTVSSVNKMLKLHSTDEAVPVTPGI
Subjt:  MCDLEQTEPLWTVKHIGGAMRGSGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFSFRFHRGTHITVTVSSVNKMLKLHSTDEAVPVTPGI

Query:  QLVEVTAPATSENYSEVAGAVSTFCEYLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM
        QLVEVTAPATSENYSEVA AVSTFCEYLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM
Subjt:  QLVEVTAPATSENYSEVAGAVSTFCEYLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM
TrEMBL top hitse value%identityAlignment
A0A1S3BBM1 mediator of RNA polymerase II transcription subunit 183.4e-7894.48Show/hide
Query:  MCDLEQTEPLWTVKHIGGAMRGSGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFSFRFHRGTHITVTVSSVNKMLKLHSTDEAVPVTPGI
        +CDLEQ EP WTVKHIGGA+RG+GAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGF+FRF+RG HITVTVSSVNKMLKLHSTDEAVPVTPGI
Subjt:  MCDLEQTEPLWTVKHIGGAMRGSGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFSFRFHRGTHITVTVSSVNKMLKLHSTDEAVPVTPGI

Query:  QLVEVTAPATSENYSEVAGAVSTFCEYLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM
        QLVEVTAPATS+NYSEVAGAVSTFCEYLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM
Subjt:  QLVEVTAPATSENYSEVAGAVSTFCEYLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM
A0A5A7VHE6 Mediator of RNA polymerase II transcription subunit 183.4e-7894.48Show/hide
Query:  MCDLEQTEPLWTVKHIGGAMRGSGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFSFRFHRGTHITVTVSSVNKMLKLHSTDEAVPVTPGI
        +CDLEQ EP WTVKHIGGA+RG+GAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGF+FRF+RG HITVTVSSVNKMLKLHSTDEAVPVTPGI
Subjt:  MCDLEQTEPLWTVKHIGGAMRGSGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFSFRFHRGTHITVTVSSVNKMLKLHSTDEAVPVTPGI

Query:  QLVEVTAPATSENYSEVAGAVSTFCEYLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM
        QLVEVTAPATS+NYSEVAGAVSTFCEYLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM
Subjt:  QLVEVTAPATSENYSEVAGAVSTFCEYLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM
A0A6J1CS50 mediator of RNA polymerase II transcription subunit 181.1e-7996.32Show/hide
Query:  MCDLEQTEPLWTVKHIGGAMRGSGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFSFRFHRGTHITVTVSSVNKMLKLHSTDEAVPVTPGI
        +CDLEQ EP WTVKHIGGAMRG+GAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGF+FRFHRG HITVTVSSVNKMLKLHSTDEAVPVTPGI
Subjt:  MCDLEQTEPLWTVKHIGGAMRGSGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFSFRFHRGTHITVTVSSVNKMLKLHSTDEAVPVTPGI

Query:  QLVEVTAPATSENYSEVAGAVSTFCEYLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM
        QLVEVTAPATSENYSEVAGAVSTFCEYLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM
Subjt:  QLVEVTAPATSENYSEVAGAVSTFCEYLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM
A0A6J1GHW3 mediator of RNA polymerase II transcription subunit 188.6e-8299.39Show/hide
Query:  MCDLEQTEPLWTVKHIGGAMRGSGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFSFRFHRGTHITVTVSSVNKMLKLHSTDEAVPVTPGI
        MCDLEQTEP WTVKHIGGAMRGSGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFSFRFHRGTHITVTVSSVNKMLKLHSTDEAVPVTPGI
Subjt:  MCDLEQTEPLWTVKHIGGAMRGSGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFSFRFHRGTHITVTVSSVNKMLKLHSTDEAVPVTPGI

Query:  QLVEVTAPATSENYSEVAGAVSTFCEYLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM
        QLVEVTAPATSENYSEVAGAVSTFCEYLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM
Subjt:  QLVEVTAPATSENYSEVAGAVSTFCEYLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM
A0A6J1KK74 mediator of RNA polymerase II transcription subunit 184.3e-8198.77Show/hide
Query:  MCDLEQTEPLWTVKHIGGAMRGSGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFSFRFHRGTHITVTVSSVNKMLKLHSTDEAVPVTPGI
        MCDLEQTEP WTVKHIGGAMRGSGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFSFRFHRGTHITVTVSSVNKMLKLHSTDEAVPVTPGI
Subjt:  MCDLEQTEPLWTVKHIGGAMRGSGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFSFRFHRGTHITVTVSSVNKMLKLHSTDEAVPVTPGI

Query:  QLVEVTAPATSENYSEVAGAVSTFCEYLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM
        QLVEVTAPATSENYSEVA AVSTFCEYLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM
Subjt:  QLVEVTAPATSENYSEVAGAVSTFCEYLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM
SwissProt top hitse value%identityAlignment
Q9SJZ6 Mediator of RNA polymerase II transcription subunit 183.6e-6978.53Show/hide
Query:  MCDLEQTEPLWTVKHIGGAMRGSGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFSFRFHRGTHITVTVSSVNKMLKLHSTDEAVPVTPGI
        +CDL+Q EP WTVKH+GGAMRG+GA+Q+SVLVR M+ESKVSKN LR+FYALGYKLDHELL+VGF+F F R  HI+V+VSSVNKM K+H+ DEAVPVTPG+
Subjt:  MCDLEQTEPLWTVKHIGGAMRGSGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFSFRFHRGTHITVTVSSVNKMLKLHSTDEAVPVTPGI

Query:  QLVEVTAPATSENYSEVAGAVSTFCEYLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM
        Q+V+VTAPATSENYSEVA AVS+FCE+LAPL+HLSKP ISTGVVPTAAAAAASL+SDG GTT+
Subjt:  QLVEVTAPATSENYSEVAGAVSTFCEYLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM
Arabidopsis top hitse value%identityAlignment
AT2G22370.1 unknown protein2.6e-7078.53Show/hide
Query:  MCDLEQTEPLWTVKHIGGAMRGSGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFSFRFHRGTHITVTVSSVNKMLKLHSTDEAVPVTPGI
        +CDL+Q EP WTVKH+GGAMRG+GA+Q+SVLVR M+ESKVSKN LR+FYALGYKLDHELL+VGF+F F R  HI+V+VSSVNKM K+H+ DEAVPVTPG+
Subjt:  MCDLEQTEPLWTVKHIGGAMRGSGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFSFRFHRGTHITVTVSSVNKMLKLHSTDEAVPVTPGI

Query:  QLVEVTAPATSENYSEVAGAVSTFCEYLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM
        Q+V+VTAPATSENYSEVA AVS+FCE+LAPL+HLSKP ISTGVVPTAAAAAASL+SDG GTT+
Subjt:  QLVEVTAPATSENYSEVAGAVSTFCEYLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTGACCTCGAGCAGACGGAACCGTTGTGGACTGTTAAACATATTGGAGGGGCAATGAGAGGTTCAGGTGCTGAACAACTCTCTGTTCTGGTTAGGACAATGGTAGA
AAGCAAAGTTAGTAAGAACGTGCTTCGTTTATTCTATGCGCTTGGCTATAAGTTAGACCATGAGCTGCTGAGAGTTGGGTTTTCTTTCCGATTCCACCGGGGCACTCATA
TAACAGTGACGGTTTCTTCAGTTAATAAGATGTTGAAGCTTCATTCGACCGATGAGGCTGTACCTGTAACACCTGGTATACAGCTAGTTGAAGTGACAGCCCCAGCAACT
TCTGAAAACTACTCCGAAGTAGCCGGTGCAGTGTCAACGTTCTGTGAATATCTTGCACCGCTGCTGCATTTGTCAAAACCTGGAATATCCACAGGTGTTGTTCCTACAGC
TGCTGCCGCTGCAGCATCTCTCCTCTCCGATGGCGCGGGAACGACAATGTAG
mRNA sequenceShow/hide mRNA sequence
AAACCCTCCATAATTCTGGGTTGAAATTTCTGGTTTAGTCTGCAGATTTGAATTTGAAGGTTTGGTTGAAGACGAATTGAGATACCGAACATTTGAAGCAGCTGCATAGA
CTGCGATGGAGTGTGTGGTTCAGGGCATAATCGAGACGCAGGCAAGTTTTTCTTCCTTTTGGTCTCGAATCGTTCTTCACTTCCTTCACGATCTAGTTCCGTTTTGCGTT
TCTAATTAATTCTCTTATAGTTCTTCATTTTCATGTCTGTTTATCCACTCTAGAAATGTATTCGATCCTCTTTTTCGTCGTTTCCATAAGCTTTTGAATATCGATTATGA
CTGTGGGGTTGTGATCATCGCTGGTGTTTTTCTCTGAATTATGATTTAAAGCTTTCCTGGCGTGCGGCTGTTTCTTCGATTACTATAATCTGTTGTTTTCCACCATTTTC
AATTGAGCTTACTTTTTCTCTAGGTTATTCCTTTCTTGATAGTAGCGACAAGTTTTTGTGCTTTGGACTTCTCCTGACATTTTGATTCTGCAGCACGTTGAGGCGCTTGA
GATTCTTCTTCAAGGAATTTGCGGCGTTCCCAGAGAACGATTAAGGCTCCATGAAATATGCCTAAAAAGTGGACCTAACTTAGGTGCTGTGGCTTCGGAGGTTCGAATCA
TGTGTGACCTCGAGCAGACGGAACCGTTGTGGACTGTTAAACATATTGGAGGGGCAATGAGAGGTTCAGGTGCTGAACAACTCTCTGTTCTGGTTAGGACAATGGTAGAA
AGCAAAGTTAGTAAGAACGTGCTTCGTTTATTCTATGCGCTTGGCTATAAGTTAGACCATGAGCTGCTGAGAGTTGGGTTTTCTTTCCGATTCCACCGGGGCACTCATAT
AACAGTGACGGTTTCTTCAGTTAATAAGATGTTGAAGCTTCATTCGACCGATGAGGCTGTACCTGTAACACCTGGTATACAGCTAGTTGAAGTGACAGCCCCAGCAACTT
CTGAAAACTACTCCGAAGTAGCCGGTGCAGTGTCAACGTTCTGTGAATATCTTGCACCGCTGCTGCATTTGTCAAAACCTGGAATATCCACAGGTGTTGTTCCTACAGCT
GCTGCCGCTGCAGCATCTCTCCTCTCCGATGGCGCGGGAACGACAATGTAGATGGTTTGCTTTGATGTCAGCAGTTTTTCAAGCTGAACTCCGATCATTTTCTCGTCCAT
GAAGCTCTGCATCCGTTCCCTTTTGTGCCTTGAAGCTCCCGGTTTGGATTCGATGCTGCTTATCTGAATTCTGGACAAAAAAGTTCAATCTAAAAACCATTTTTTCGTAG
TTGCTACATAAAATGTTAGACTAGACTAAGTTGTTGAAGGTAATATGCCTTGTTTTCACGTCTCAAAGATAATATGAAAGGCTTATATTTATGAAGCATTTCGAATTTGG
GATTTTCTGGTGTACTCTTTCTTCTACATTTTTATACAGCATTTGAATAACTC
Protein sequenceShow/hide protein sequence
MCDLEQTEPLWTVKHIGGAMRGSGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFSFRFHRGTHITVTVSSVNKMLKLHSTDEAVPVTPGIQLVEVTAPAT
SENYSEVAGAVSTFCEYLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM