; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg04123 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04123
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPentatricopeptide repeat-containing protein
Genome locationCarg_Chr19:7755588..7756682
RNA-Seq ExpressionCarg04123
SyntenyCarg04123
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572199.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]2.8e-17599.06Show/hide
Query:  MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSKSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPED
        MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFS+SEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPED
Subjt:  MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSKSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPED

Query:  NRNQRFNRHSEGSSSRFANEGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQFSESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAM
        NRNQRFNRHSEGSSSRFANEGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQFSESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAM
Subjt:  NRNQRFNRHSEGSSSRFANEGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQFSESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAM

Query:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCFEMLESGHSPNLT
        LDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEK DEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFC EMLESGHSPNLT
Subjt:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCFEMLESGHSPNLT

Query:  TFVGLIDELCKEKGVDEAHT
        TFVGLIDELCKEKGVDEAHT
Subjt:  TFVGLIDELCKEKGVDEAHT

KAG7011839.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]3.7e-204100Show/hide
Query:  MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSKSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPED
        MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSKSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPED
Subjt:  MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSKSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPED

Query:  NRNQRFNRHSEGSSSRFANEGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQFSESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAM
        NRNQRFNRHSEGSSSRFANEGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQFSESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAM
Subjt:  NRNQRFNRHSEGSSSRFANEGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQFSESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAM

Query:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCFEMLESGHSPNLT
        LDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCFEMLESGHSPNLT
Subjt:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCFEMLESGHSPNLT

Query:  TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLREFLNKRAPFSPHIWELIFGKKTKEFF
        TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLREFLNKRAPFSPHIWELIFGKKTKEFF
Subjt:  TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLREFLNKRAPFSPHIWELIFGKKTKEFF

XP_022952706.1 pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita moschata]5.0e-20198.35Show/hide
Query:  MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSKSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPED
        MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFS+SEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPED
Subjt:  MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSKSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPED

Query:  NRNQRFNRHSEGSSSRFANEGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQFSESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAM
        NRNQRFNRHSEGSSSRFAN+GPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQ SESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAM
Subjt:  NRNQRFNRHSEGSSSRFANEGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQFSESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAM

Query:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCFEMLESGHSPNLT
        LDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEK DEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFC EMLESGHSPNLT
Subjt:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCFEMLESGHSPNLT

Query:  TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLREFLNKRAPFSPHIWELIFGKKTKEFF
        TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLR+FLNKRAPFSPHIWELIFGKKTKEFF
Subjt:  TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLREFLNKRAPFSPHIWELIFGKKTKEFF

XP_022969144.1 pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita maxima]9.2e-19595.88Show/hide
Query:  MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSKSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPED
        MGALQMQLQSRLRVSKIL STIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFS+SEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPED
Subjt:  MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSKSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPED

Query:  NRNQRFNRHSEGSSSRFANEGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQFSESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAM
        NRNQRFNRH EGS SRFANEGPMSR R+ESLSQKDFSFLEKFKLNTDN STSTEK EPSSSAQFSESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAM
Subjt:  NRNQRFNRHSEGSSSRFANEGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQFSESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAM

Query:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCFEMLESGHSPNLT
        LDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAE  DEAIRIFRKMQNNGISPNAFSYG+LIQGLYK K+LEDAVSFC EMLESGHSPNLT
Subjt:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCFEMLESGHSPNLT

Query:  TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLREFLNKRAPFSPHIWELIFGKKTKEFF
        TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEK LREFLNKRAPFSPHIWELIFGKKTKEFF
Subjt:  TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLREFLNKRAPFSPHIWELIFGKKTKEFF

XP_023554525.1 pentatricopeptide repeat-containing protein At4g38150-like isoform X1 [Cucurbita pepo subsp. pepo]1.8e-19897.8Show/hide
Query:  MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSKSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPED
        MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFS+SEPRSSPPQRRSPPDPREARRVPKFAGE SAPYPED
Subjt:  MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSKSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPED

Query:  NRNQRFNRHSEGSSSRFANEGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQFSESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAM
        NRNQRFNRHSEGSSSRFANEGPMSR RNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQFSESMQG+QSQPQCPPEADEIFRKMKETGLIPNAVAM
Subjt:  NRNQRFNRHSEGSSSRFANEGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQFSESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAM

Query:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCFEMLESGHSPNLT
        LDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEK DEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFC EMLESGHSPNLT
Subjt:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCFEMLESGHSPNLT

Query:  TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLREFLNKRAPFSPHIWELIFGKKTKEFF
        TFVGLIDELCKEKG DEAHTVIETLKQKGFLINEK LREFLNKRAPFSPHIWELIFGKKTKEFF
Subjt:  TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLREFLNKRAPFSPHIWELIFGKKTKEFF

TrEMBL top hitse value%identityAlignment
A0A1S3CFW0 pentatricopeptide repeat-containing protein At4g381501.3e-14980Show/hide
Query:  QLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSKSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRF
        Q QSRL+VSKILSS+IR WE  FPLLH+PLRTPD SLSP  SR FSSNSMDDD  FS+SEPR++PPQRR PPD REARRVP+  G V+  Y  DNRNQRF
Subjt:  QLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSKSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRF

Query:  NRHSEGSSSRFANEGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEP-SSSAQFSESMQGK-QSQPQCPPEADEIFRKMKETGLIPNAVAMLDGL
        NRHSEGSSSRF NEG  SR R+ESLSQKDFSFLEKFKLNTDNQS+  EK E  SSSA  SESMQ K QSQ Q PP ADEIFRKMKE+GLIPNAVAMLDGL
Subjt:  NRHSEGSSSRFANEGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEP-SSSAQFSESMQGK-QSQPQCPPEADEIFRKMKETGLIPNAVAMLDGL

Query:  CKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCFEMLESGHSPNLTTFVG
        CKDGLIQEAMKLF LIREKGTIPEVV+YTAVVDGFCKAEKFDEAIRIFRKMQN GISPNAFS+G+LIQGLYK K+L+DAV+FC EMLESGH PNLTTFVG
Subjt:  CKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCFEMLESGHSPNLTTFVG

Query:  LIDELCKEKGVDEAHTVIETLKQKGFLINEKDLREFLNKRAPFSPHIWELIFGKKTKEFF
        LID LC EKGVDEAH V+ET KQKGFLI+EK LREFLNKRAPFSP IW++ FG K   FF
Subjt:  LIDELCKEKGVDEAHTVIETLKQKGFLINEKDLREFLNKRAPFSPHIWELIFGKKTKEFF

A0A5D3D5J5 Pentatricopeptide repeat-containing protein1.3e-14980Show/hide
Query:  QLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSKSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRF
        Q QSRL+VSKILSS+IR WE  FPLLH+PLRTPD SLSP  SR FSSNSMDDD  FS+SEPR++PPQRR PPD REARRVP+  G V+  Y  DNRNQRF
Subjt:  QLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSKSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRF

Query:  NRHSEGSSSRFANEGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEP-SSSAQFSESMQGK-QSQPQCPPEADEIFRKMKETGLIPNAVAMLDGL
        NRHSEGSSSRF NEG  SR R+ESLSQKDFSFLEKFKLNTDNQS+  EK E  SSSA  SESMQ K QSQ Q PP ADEIFRKMKE+GLIPNAVAMLDGL
Subjt:  NRHSEGSSSRFANEGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEP-SSSAQFSESMQGK-QSQPQCPPEADEIFRKMKETGLIPNAVAMLDGL

Query:  CKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCFEMLESGHSPNLTTFVG
        CKDGLIQEAMKLF LIREKGTIPEVV+YTAVVDGFCKAEKFDEAIRIFRKMQN GISPNAFS+G+LIQGLYK K+L+DAV+FC EMLESGH PNLTTFVG
Subjt:  CKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCFEMLESGHSPNLTTFVG

Query:  LIDELCKEKGVDEAHTVIETLKQKGFLINEKDLREFLNKRAPFSPHIWELIFGKKTKEFF
        LID LC EKGVDEAH V+ET KQKGFLI+EK LREFLNKRAPFSP IW++ FG K   FF
Subjt:  LIDELCKEKGVDEAHTVIETLKQKGFLINEKDLREFLNKRAPFSPHIWELIFGKKTKEFF

A0A6J1C2J3 pentatricopeptide repeat-containing protein At4g381503.3e-15879.4Show/hide
Query:  MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSKSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPED
        M ALQ+QLQSRLR+SKI+SS+I   ER  PLLHD LRT D SL P +SRCFSSNSMDDDW  S SEPRS+PP RRSPPD RE RRVPKF+  VSA YP D
Subjt:  MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSKSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPED

Query:  NRNQRFNRHSEGSSSRFANEGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQFSESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAM
        +RN+R N+ SEGSS RF NEG +SR R+E LSQKDFSFLEKFKLNTDNQS+S EK E SS+ +FSES+Q KQSQPQ PPEADEIF+KMKETGLIPNAVAM
Subjt:  NRNQRFNRHSEGSSSRFANEGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQFSESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAM

Query:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCFEMLESGHSPNLT
        LDGLCKDGLIQEAMKLFGLIREKGTIPEVV+YTAVVDGFCKAEK DEAIRIFRKMQ NGISPNAFS+G+LIQGLYK  +LE+A+ FC EMLESGHSPN+T
Subjt:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCFEMLESGHSPNLT

Query:  TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLREFLNKRAPFSPHIWELIFGKKTKEFF
        T VGL+DELCKE+G +EA +VIETLKQKGFL+NEK LREFLNKRAPFSP+IWE IFGKKTKEFF
Subjt:  TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLREFLNKRAPFSPHIWELIFGKKTKEFF

A0A6J1GKZ0 pentatricopeptide repeat-containing protein At4g38150-like2.4e-20198.35Show/hide
Query:  MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSKSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPED
        MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFS+SEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPED
Subjt:  MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSKSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPED

Query:  NRNQRFNRHSEGSSSRFANEGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQFSESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAM
        NRNQRFNRHSEGSSSRFAN+GPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQ SESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAM
Subjt:  NRNQRFNRHSEGSSSRFANEGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQFSESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAM

Query:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCFEMLESGHSPNLT
        LDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEK DEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFC EMLESGHSPNLT
Subjt:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCFEMLESGHSPNLT

Query:  TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLREFLNKRAPFSPHIWELIFGKKTKEFF
        TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLR+FLNKRAPFSPHIWELIFGKKTKEFF
Subjt:  TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLREFLNKRAPFSPHIWELIFGKKTKEFF

A0A6J1I1Q2 pentatricopeptide repeat-containing protein At4g38150-like4.4e-19595.88Show/hide
Query:  MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSKSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPED
        MGALQMQLQSRLRVSKIL STIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFS+SEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPED
Subjt:  MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSKSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPED

Query:  NRNQRFNRHSEGSSSRFANEGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQFSESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAM
        NRNQRFNRH EGS SRFANEGPMSR R+ESLSQKDFSFLEKFKLNTDN STSTEK EPSSSAQFSESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAM
Subjt:  NRNQRFNRHSEGSSSRFANEGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQFSESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAM

Query:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCFEMLESGHSPNLT
        LDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAE  DEAIRIFRKMQNNGISPNAFSYG+LIQGLYK K+LEDAVSFC EMLESGHSPNLT
Subjt:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCFEMLESGHSPNLT

Query:  TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLREFLNKRAPFSPHIWELIFGKKTKEFF
        TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEK LREFLNKRAPFSPHIWELIFGKKTKEFF
Subjt:  TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLREFLNKRAPFSPHIWELIFGKKTKEFF

SwissProt top hitse value%identityAlignment
Q0WVK7 Pentatricopeptide repeat-containing protein At1g05670, mitochondrial2.6e-2234.39Show/hide
Query:  EADEIFRKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGLYK
        EA+E F +M   G++P+ V    ++DG CK G I+ A K F  +  +   P+V+ YTA++ GFC+     EA ++F +M   G+ P++ ++  LI G  K
Subjt:  EADEIFRKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGLYK

Query:  SKQLEDAVSFCFEMLESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETLKQKGFLIN
        +  ++DA      M+++G SPN+ T+  LID LCKE  +D A+ ++  + + G   N
Subjt:  SKQLEDAVSFCFEMLESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETLKQKGFLIN

Q6NQ83 Pentatricopeptide repeat-containing protein At3g22470, mitochondrial9.7e-2230.46Show/hide
Query:  EADEIFRKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGLYK
        EA E++ +M   G+ P+ +   +++DG CK+  + EA ++F L+  KG  P++V Y+ +++ +CKA++ D+ +R+FR++ + G+ PN  +Y  L+ G  +
Subjt:  EADEIFRKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGLYK

Query:  SKQLEDAVSFCFEMLESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETLKQ
        S +L  A     EM+  G  P++ T+  L+D LC    +++A  + E +++
Subjt:  SKQLEDAVSFCFEMLESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETLKQ

Q9FNL2 Pentatricopeptide repeat-containing protein At5g461004.4e-2236Show/hide
Query:  EIFRKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQ
        +IF +M + G  P++     ++ GLC+ G I EA KLF  + EK   P VV YT++++G C ++  DEA+R   +M++ GI PN F+Y  L+ GL K  +
Subjt:  EIFRKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQ

Query:  LEDAVSFCFEMLESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETLKQKG
           A+     M+  G  PN+ T+  LI  LCKE+ + EA  +++ +  +G
Subjt:  LEDAVSFCFEMLESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETLKQKG

Q9LPX2 Pentatricopeptide repeat-containing protein At1g12775, mitochondrial1.1e-2234.87Show/hide
Query:  ADEIFRKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGLYKS
        A E+ RKM+E  +  +AV    ++DGLCKDG +  A  LF  +  KG   +++ Y  ++ GFC A ++D+  ++ R M    ISPN  ++ +LI    K 
Subjt:  ADEIFRKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGLYKS

Query:  KQLEDAVSFCFEMLESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETLKQKG
         +L +A     EM++ G +PN  T+  LID  CKE  ++EA  +++ +  KG
Subjt:  KQLEDAVSFCFEMLESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETLKQKG

Q9SZL5 Pentatricopeptide repeat-containing protein At4g381501.5e-7557.56Show/hide
Query:  PYPEDNRNQRFNRHSEGSSSRFANEGPMSRPRNESLSQ---KDFSFLEKFKLNTDNQSTSTEKIEPSSSAQFSESMQGKQSQPQCPPE-ADEIFRKMKET
        P P  NR  R  R     SS    E P  +  N   S     D  FLE+FKL  +  S  T K E     Q+ +       +P  PPE +DEIF+KMKE 
Subjt:  PYPEDNRNQRFNRHSEGSSSRFANEGPMSRPRNESLSQ---KDFSFLEKFKLNTDNQSTSTEKIEPSSSAQFSESMQGKQSQPQCPPE-ADEIFRKMKET

Query:  GLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCFEML
        GLIPNAVAMLDGLCKDGL+QEAMKLFGL+R+KGTIPEVV+YTAVV+ FCKA K ++A RIFRKMQNNGI+PNAFSYG+L+QGLY    L+DAV+FC EML
Subjt:  GLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCFEML

Query:  ESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLREFLNKRAPFSPHIWELIFGKKTKE
        ESGHSPN+ TFV L+D LC+ KGV++A + I+TL QKGF +N K ++EF++KRAPF    WE IF KK  E
Subjt:  ESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLREFLNKRAPFSPHIWELIFGKKTKE

Arabidopsis top hitse value%identityAlignment
AT1G05670.1 Pentatricopeptide repeat (PPR-like) superfamily protein1.8e-2334.39Show/hide
Query:  EADEIFRKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGLYK
        EA+E F +M   G++P+ V    ++DG CK G I+ A K F  +  +   P+V+ YTA++ GFC+     EA ++F +M   G+ P++ ++  LI G  K
Subjt:  EADEIFRKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGLYK

Query:  SKQLEDAVSFCFEMLESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETLKQKGFLIN
        +  ++DA      M+++G SPN+ T+  LID LCKE  +D A+ ++  + + G   N
Subjt:  SKQLEDAVSFCFEMLESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETLKQKGFLIN

AT1G12775.1 Pentatricopeptide repeat (PPR) superfamily protein8.1e-2434.87Show/hide
Query:  ADEIFRKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGLYKS
        A E+ RKM+E  +  +AV    ++DGLCKDG +  A  LF  +  KG   +++ Y  ++ GFC A ++D+  ++ R M    ISPN  ++ +LI    K 
Subjt:  ADEIFRKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGLYKS

Query:  KQLEDAVSFCFEMLESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETLKQKG
         +L +A     EM++ G +PN  T+  LID  CKE  ++EA  +++ +  KG
Subjt:  KQLEDAVSFCFEMLESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETLKQKG

AT4G38150.1 Pentatricopeptide repeat (PPR) superfamily protein1.1e-7657.56Show/hide
Query:  PYPEDNRNQRFNRHSEGSSSRFANEGPMSRPRNESLSQ---KDFSFLEKFKLNTDNQSTSTEKIEPSSSAQFSESMQGKQSQPQCPPE-ADEIFRKMKET
        P P  NR  R  R     SS    E P  +  N   S     D  FLE+FKL  +  S  T K E     Q+ +       +P  PPE +DEIF+KMKE 
Subjt:  PYPEDNRNQRFNRHSEGSSSRFANEGPMSRPRNESLSQ---KDFSFLEKFKLNTDNQSTSTEKIEPSSSAQFSESMQGKQSQPQCPPE-ADEIFRKMKET

Query:  GLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCFEML
        GLIPNAVAMLDGLCKDGL+QEAMKLFGL+R+KGTIPEVV+YTAVV+ FCKA K ++A RIFRKMQNNGI+PNAFSYG+L+QGLY    L+DAV+FC EML
Subjt:  GLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCFEML

Query:  ESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLREFLNKRAPFSPHIWELIFGKKTKE
        ESGHSPN+ TFV L+D LC+ KGV++A + I+TL QKGF +N K ++EF++KRAPF    WE IF KK  E
Subjt:  ESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLREFLNKRAPFSPHIWELIFGKKTKE

AT4G38150.2 Pentatricopeptide repeat (PPR) superfamily protein1.1e-7657.56Show/hide
Query:  PYPEDNRNQRFNRHSEGSSSRFANEGPMSRPRNESLSQ---KDFSFLEKFKLNTDNQSTSTEKIEPSSSAQFSESMQGKQSQPQCPPE-ADEIFRKMKET
        P P  NR  R  R     SS    E P  +  N   S     D  FLE+FKL  +  S  T K E     Q+ +       +P  PPE +DEIF+KMKE 
Subjt:  PYPEDNRNQRFNRHSEGSSSRFANEGPMSRPRNESLSQ---KDFSFLEKFKLNTDNQSTSTEKIEPSSSAQFSESMQGKQSQPQCPPE-ADEIFRKMKET

Query:  GLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCFEML
        GLIPNAVAMLDGLCKDGL+QEAMKLFGL+R+KGTIPEVV+YTAVV+ FCKA K ++A RIFRKMQNNGI+PNAFSYG+L+QGLY    L+DAV+FC EML
Subjt:  GLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCFEML

Query:  ESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLREFLNKRAPFSPHIWELIFGKKTKE
        ESGHSPN+ TFV L+D LC+ KGV++A + I+TL QKGF +N K ++EF++KRAPF    WE IF KK  E
Subjt:  ESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLREFLNKRAPFSPHIWELIFGKKTKE

AT5G03560.2 Tetratricopeptide repeat (TPR)-like superfamily protein4.9e-2929.64Show/hide
Query:  DLSLSPVESRCFSSNSMDDDWNFSKSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPY-----PEDNRNQRFNRHSEGSSSRFANEGPMSRPRNESLSQK
        D++ S +    FS       +  S S   SSP    +    +E +   +F+  + A +     PE    + F R    S+S F         R  S   K
Subjt:  DLSLSPVESRCFSSNSMDDDWNFSKSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPY-----PEDNRNQRFNRHSEGSSSRFANEGPMSRPRNESLSQK

Query:  DFSFLEKFKLNTDNQSTSTE--------KIEPSSSAQFSESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTI
          +    F L+ D+    TE        K EP        S +    +P+ P    EIF KM+  G    AV M D L KDG   EA++LF  I++K  +
Subjt:  DFSFLEKFKLNTDNQSTSTE--------KIEPSSSAQFSESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTI

Query:  PEVVVYTAVVDGFCKAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGL-YKSKQLEDAVSFCFEMLESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETL
        P+VV +TA+V+ +  A +  E +++F +M  +G+SPNA++Y +LI+GL    K  +DA  +  EM+ +G SPN  T+  + +   +E   + A  +++ +
Subjt:  PEVVVYTAVVDGFCKAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGL-YKSKQLEDAVSFCFEMLESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETL

Query:  KQKGFLINEKDLREFLN-KRAPFSPHIWELIFGK
        K KGF+ +EK +RE L  KR      +  L+F K
Subjt:  KQKGFLINEKDLREFLN-KRAPFSPHIWELIFGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCGTTGCAGATGCAATTACAGTCTCGCCTTCGAGTTTCGAAGATTTTGTCTTCAACAATTCGGAATTGGGAAAGAGGCTTTCCTCTGCTCCATGATCCATTGCG
AACGCCGGATTTGTCACTCTCGCCGGTGGAATCTCGCTGTTTTAGCTCCAATTCCATGGATGACGATTGGAACTTCTCAAAGTCCGAGCCGAGAAGCAGCCCGCCGCAAC
GACGTTCTCCCCCGGATCCTCGGGAAGCTCGTCGAGTTCCTAAATTCGCCGGGGAAGTATCTGCTCCTTACCCTGAGGATAATCGGAATCAACGGTTTAATAGGCATTCG
GAAGGTTCCTCGTCCCGATTCGCAAACGAAGGGCCGATGTCGCGGCCAAGGAATGAGTCTTTGTCTCAGAAGGATTTTAGCTTTCTTGAAAAATTCAAGCTGAACACTGA
CAATCAGAGCACTAGTACAGAGAAAATCGAGCCGAGCTCTTCTGCTCAGTTTTCTGAATCAATGCAGGGGAAGCAATCGCAACCACAGTGTCCTCCAGAAGCGGATGAGA
TATTCAGGAAAATGAAGGAAACTGGTCTAATTCCCAACGCTGTTGCTATGCTTGATGGGCTTTGCAAAGATGGGCTTATCCAAGAAGCAATGAAACTATTTGGTTTGATT
CGTGAGAAGGGTACAATTCCAGAAGTTGTGGTTTACACTGCTGTTGTTGATGGGTTTTGCAAGGCCGAGAAGTTTGATGAAGCAATTAGGATTTTCAGGAAAATGCAGAA
TAATGGCATTTCTCCCAATGCCTTCAGTTACGGCATCTTGATACAGGGACTGTACAAATCCAAACAATTAGAGGATGCCGTATCATTTTGCTTTGAGATGTTAGAATCTG
GGCATTCTCCAAATCTAACGACTTTTGTCGGCCTAATTGATGAGTTATGCAAAGAAAAGGGGGTGGACGAAGCTCATACTGTCATAGAAACCTTAAAACAAAAGGGATTC
TTGATTAATGAGAAAGATTTAAGAGAATTCTTGAATAAAAGAGCCCCATTTTCTCCACATATCTGGGAACTAATCTTCGGGAAGAAAACGAAGGAATTTTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGCGTTGCAGATGCAATTACAGTCTCGCCTTCGAGTTTCGAAGATTTTGTCTTCAACAATTCGGAATTGGGAAAGAGGCTTTCCTCTGCTCCATGATCCATTGCG
AACGCCGGATTTGTCACTCTCGCCGGTGGAATCTCGCTGTTTTAGCTCCAATTCCATGGATGACGATTGGAACTTCTCAAAGTCCGAGCCGAGAAGCAGCCCGCCGCAAC
GACGTTCTCCCCCGGATCCTCGGGAAGCTCGTCGAGTTCCTAAATTCGCCGGGGAAGTATCTGCTCCTTACCCTGAGGATAATCGGAATCAACGGTTTAATAGGCATTCG
GAAGGTTCCTCGTCCCGATTCGCAAACGAAGGGCCGATGTCGCGGCCAAGGAATGAGTCTTTGTCTCAGAAGGATTTTAGCTTTCTTGAAAAATTCAAGCTGAACACTGA
CAATCAGAGCACTAGTACAGAGAAAATCGAGCCGAGCTCTTCTGCTCAGTTTTCTGAATCAATGCAGGGGAAGCAATCGCAACCACAGTGTCCTCCAGAAGCGGATGAGA
TATTCAGGAAAATGAAGGAAACTGGTCTAATTCCCAACGCTGTTGCTATGCTTGATGGGCTTTGCAAAGATGGGCTTATCCAAGAAGCAATGAAACTATTTGGTTTGATT
CGTGAGAAGGGTACAATTCCAGAAGTTGTGGTTTACACTGCTGTTGTTGATGGGTTTTGCAAGGCCGAGAAGTTTGATGAAGCAATTAGGATTTTCAGGAAAATGCAGAA
TAATGGCATTTCTCCCAATGCCTTCAGTTACGGCATCTTGATACAGGGACTGTACAAATCCAAACAATTAGAGGATGCCGTATCATTTTGCTTTGAGATGTTAGAATCTG
GGCATTCTCCAAATCTAACGACTTTTGTCGGCCTAATTGATGAGTTATGCAAAGAAAAGGGGGTGGACGAAGCTCATACTGTCATAGAAACCTTAAAACAAAAGGGATTC
TTGATTAATGAGAAAGATTTAAGAGAATTCTTGAATAAAAGAGCCCCATTTTCTCCACATATCTGGGAACTAATCTTCGGGAAGAAAACGAAGGAATTTTTCTGA
Protein sequenceShow/hide protein sequence
MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSKSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHS
EGSSSRFANEGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQFSESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLI
REKGTIPEVVVYTAVVDGFCKAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCFEMLESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETLKQKGF
LINEKDLREFLNKRAPFSPHIWELIFGKKTKEFF