; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg04133 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04133
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRING-type domain-containing protein
Genome locationCarg_Chr19:7829713..7830177
RNA-Seq ExpressionCarg04133
SyntenyCarg04133
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR044249 - Probable E3 ubiquitin-protein ligase XERICO-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572211.1 putative E3 ubiquitin-protein ligase XERICO, partial [Cucurbita argyrosperma subsp. sororia]1.1e-83100Show/hide
Query:  MGLSSLPAPSEGVLNAILINAALSISIFKCIVRLILHIVGIRFSSPSSLVPSTDSFENSSELGDSNFGSSWSYLEMFRNRYPSIRFDKVQGSERLEHDCS
        MGLSSLPAPSEGVLNAILINAALSISIFKCIVRLILHIVGIRFSSPSSLVPSTDSFENSSELGDSNFGSSWSYLEMFRNRYPSIRFDKVQGSERLEHDCS
Subjt:  MGLSSLPAPSEGVLNAILINAALSISIFKCIVRLILHIVGIRFSSPSSLVPSTDSFENSSELGDSNFGSSWSYLEMFRNRYPSIRFDKVQGSERLEHDCS

Query:  VCLTQFEPESEINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW
        VCLTQFEPESEINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW
Subjt:  VCLTQFEPESEINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW

XP_022952716.1 probable E3 ubiquitin-protein ligase XERICO [Cucurbita moschata]5.2e-8398.7Show/hide
Query:  MGLSSLPAPSEGVLNAILINAALSISIFKCIVRLILHIVGIRFSSPSSLVPSTDSFENSSELGDSNFGSSWSYLEMFRNRYPSIRFDKVQGSERLEHDCS
        MGLSSLPAPSEGVLNAILINAALSISIF+CIVRLILHI+GIRFSSPSSLVPSTDSFENSSELGDSNFGSSWSYLEMFRNRYPSIRFDKVQGSERLEHDCS
Subjt:  MGLSSLPAPSEGVLNAILINAALSISIFKCIVRLILHIVGIRFSSPSSLVPSTDSFENSSELGDSNFGSSWSYLEMFRNRYPSIRFDKVQGSERLEHDCS

Query:  VCLTQFEPESEINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW
        VCLTQFEPESEINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW
Subjt:  VCLTQFEPESEINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW

XP_022969282.1 probable E3 ubiquitin-protein ligase XERICO [Cucurbita maxima]2.4e-8399.35Show/hide
Query:  MGLSSLPAPSEGVLNAILINAALSISIFKCIVRLILHIVGIRFSSPSSLVPSTDSFENSSELGDSNFGSSWSYLEMFRNRYPSIRFDKVQGSERLEHDCS
        MGLSSLPAPSEGVLNAILINAALSISIFKCIVRLILHIVGIRFSSPSSLVPSTDSFENSSELGDSNFGSSWSYLEMFRNRYP+IRFDKVQGSERLEHDCS
Subjt:  MGLSSLPAPSEGVLNAILINAALSISIFKCIVRLILHIVGIRFSSPSSLVPSTDSFENSSELGDSNFGSSWSYLEMFRNRYPSIRFDKVQGSERLEHDCS

Query:  VCLTQFEPESEINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW
        VCLTQFEPESEINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW
Subjt:  VCLTQFEPESEINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW

XP_023554631.1 probable E3 ubiquitin-protein ligase XERICO [Cucurbita pepo subsp. pepo]2.4e-8399.35Show/hide
Query:  MGLSSLPAPSEGVLNAILINAALSISIFKCIVRLILHIVGIRFSSPSSLVPSTDSFENSSELGDSNFGSSWSYLEMFRNRYPSIRFDKVQGSERLEHDCS
        MGLSSLPAPSEGVLNAILINAALSISIFKCIVRLILHI+GIRFSSPSSLVPSTDSFENSSELGDSNFGSSWSYLEMFRNRYPSIRFDKVQGSERLEHDCS
Subjt:  MGLSSLPAPSEGVLNAILINAALSISIFKCIVRLILHIVGIRFSSPSSLVPSTDSFENSSELGDSNFGSSWSYLEMFRNRYPSIRFDKVQGSERLEHDCS

Query:  VCLTQFEPESEINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW
        VCLTQFEPESEINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW
Subjt:  VCLTQFEPESEINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW

XP_038887530.1 probable E3 ubiquitin-protein ligase XERICO isoform X1 [Benincasa hispida]1.4e-7590.91Show/hide
Query:  MGLSSLPAPSEGVLNAILINAALSISIFKCIVRLILHIVGIRFSSPSSLVPSTDSFENSSELGDSNFGSSWSYLEMFRNRYPSIRFDKVQGSERLEHDCS
        MGLSSLPAPSEGVLN IL+N ALSIS+FKCIVRLILH++GIR S PSSLV STDSFE+SSELGDSNFGSSWSYLEMFRNRY SIRFDK+QGSER EHDCS
Subjt:  MGLSSLPAPSEGVLNAILINAALSISIFKCIVRLILHIVGIRFSSPSSLVPSTDSFENSSELGDSNFGSSWSYLEMFRNRYPSIRFDKVQGSERLEHDCS

Query:  VCLTQFEPESEINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW
        VCLTQFEPESEIN LSCGHLFHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW
Subjt:  VCLTQFEPESEINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW

TrEMBL top hitse value%identityAlignment
A0A1S3CGH9 probable E3 ubiquitin-protein ligase XERICO isoform X14.8e-7488.31Show/hide
Query:  MGLSSLPAPSEGVLNAILINAALSISIFKCIVRLILHIVGIRFSSPSSLVPSTDSFENSSELGDSNFGSSWSYLEMFRNRYPSIRFDKVQGSERLEHDCS
        MGLSSLPAPSEGVLN IL+N ALSIS+ KCIVRLILH+VGIR S PSS+V STDSFENSSELGDSNFGSSW+YLEMFRNRYP IRFDKV+ S+  EHDCS
Subjt:  MGLSSLPAPSEGVLNAILINAALSISIFKCIVRLILHIVGIRFSSPSSLVPSTDSFENSSELGDSNFGSSWSYLEMFRNRYPSIRFDKVQGSERLEHDCS

Query:  VCLTQFEPESEINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW
        VCLTQFEPES INHLSCGHLFHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW
Subjt:  VCLTQFEPESEINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW

A0A1S4E4A9 probable E3 ubiquitin-protein ligase XERICO isoform X34.8e-7488.31Show/hide
Query:  MGLSSLPAPSEGVLNAILINAALSISIFKCIVRLILHIVGIRFSSPSSLVPSTDSFENSSELGDSNFGSSWSYLEMFRNRYPSIRFDKVQGSERLEHDCS
        MGLSSLPAPSEGVLN IL+N ALSIS+ KCIVRLILH+VGIR S PSS+V STDSFENSSELGDSNFGSSW+YLEMFRNRYP IRFDKV+ S+  EHDCS
Subjt:  MGLSSLPAPSEGVLNAILINAALSISIFKCIVRLILHIVGIRFSSPSSLVPSTDSFENSSELGDSNFGSSWSYLEMFRNRYPSIRFDKVQGSERLEHDCS

Query:  VCLTQFEPESEINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW
        VCLTQFEPES INHLSCGHLFHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW
Subjt:  VCLTQFEPESEINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW

A0A5D3D707 Putative E3 ubiquitin-protein ligase XERICO1.4e-7388.89Show/hide
Query:  MGLSSLPAPSEGVLNAILINAALSISIFKCIVRLILHIVGIRFSSPSSLVPSTDSFENSSELGDSNFGSSWSYLEMFRNRYPSIRFDKVQGSERLEHDCS
        MGLSSLPAPSEGVLN IL+N ALSIS+FKCIVRLILH+VGIR S PSS+VPSTDSFE+SSELGD  FGSSW+YL+MFRNRYP IRFDKVQ SER EHDCS
Subjt:  MGLSSLPAPSEGVLNAILINAALSISIFKCIVRLILHIVGIRFSSPSSLVPSTDSFENSSELGDSNFGSSWSYLEMFRNRYPSIRFDKVQGSERLEHDCS

Query:  VCLTQFEPESEINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLMSEEEKSCF
        VCLTQFEPES INHLSCGHLFHTECLEKWLDYWNITCPLCRTPLMSEEEKSCF
Subjt:  VCLTQFEPESEINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLMSEEEKSCF

A0A6J1GLE2 probable E3 ubiquitin-protein ligase XERICO2.5e-8398.7Show/hide
Query:  MGLSSLPAPSEGVLNAILINAALSISIFKCIVRLILHIVGIRFSSPSSLVPSTDSFENSSELGDSNFGSSWSYLEMFRNRYPSIRFDKVQGSERLEHDCS
        MGLSSLPAPSEGVLNAILINAALSISIF+CIVRLILHI+GIRFSSPSSLVPSTDSFENSSELGDSNFGSSWSYLEMFRNRYPSIRFDKVQGSERLEHDCS
Subjt:  MGLSSLPAPSEGVLNAILINAALSISIFKCIVRLILHIVGIRFSSPSSLVPSTDSFENSSELGDSNFGSSWSYLEMFRNRYPSIRFDKVQGSERLEHDCS

Query:  VCLTQFEPESEINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW
        VCLTQFEPESEINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW
Subjt:  VCLTQFEPESEINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW

A0A6J1HVX6 probable E3 ubiquitin-protein ligase XERICO1.1e-8399.35Show/hide
Query:  MGLSSLPAPSEGVLNAILINAALSISIFKCIVRLILHIVGIRFSSPSSLVPSTDSFENSSELGDSNFGSSWSYLEMFRNRYPSIRFDKVQGSERLEHDCS
        MGLSSLPAPSEGVLNAILINAALSISIFKCIVRLILHIVGIRFSSPSSLVPSTDSFENSSELGDSNFGSSWSYLEMFRNRYP+IRFDKVQGSERLEHDCS
Subjt:  MGLSSLPAPSEGVLNAILINAALSISIFKCIVRLILHIVGIRFSSPSSLVPSTDSFENSSELGDSNFGSSWSYLEMFRNRYPSIRFDKVQGSERLEHDCS

Query:  VCLTQFEPESEINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW
        VCLTQFEPESEINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW
Subjt:  VCLTQFEPESEINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW

SwissProt top hitse value%identityAlignment
Q8LDB8 E3 ubiquitin-protein ligase At1g631701.5e-0852.27Show/hide
Query:  DCSVCLTQFEPESEINHLSCGHLFHTECLEKWLDYWNITCPLCR
        +C +CL+ +E E+E+  L CGH FH  C++KWL Y N TCPLC+
Subjt:  DCSVCLTQFEPESEINHLSCGHLFHTECLEKWLDYWNITCPLCR

Q9SI09 Probable E3 ubiquitin-protein ligase XERICO1.1e-3860.67Show/hide
Query:  MGLSSLPAPSEGVLNAILINAALSISIFKCIVRLILHIVGIRFSSPSSLVPS--TDSFENS--SELGDSNFGSSWSYLEMFRNRYPSIRFDKV-QGSERL
        MGLSSLP PSEG+L  IL+N ALSISI K IVR  L IVGI   SPSS  PS  T S ENS  SE  D       SYLE FRNR P++RF+ + +  ++ 
Subjt:  MGLSSLPAPSEGVLNAILINAALSISIFKCIVRLILHIVGIRFSSPSSLVPS--TDSFENS--SELGDSNFGSSWSYLEMFRNRYPSIRFDKV-QGSERL

Query:  EHDCSVCLTQFEPESEINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLM
        +++CSVCL++F+ +SEIN L CGHLFH  CLEKW+DYWNITCPLCRTPL+
Subjt:  EHDCSVCLTQFEPESEINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLM

Q9XF92 Brassinosteroid-responsive RING protein 11.6e-1343.75Show/hide
Query:  MFRNRYPSIRFDKVQGS-ERLEHDCSVCLTQFEPESEINHL-SCGHLFHTECLEKWLDYWNITCPLCRTPLMSEEEKSCF
        + R   P I+F+++  S E L  +C+VCL +FE E EI  L +C H+FH  CL++W+D+   TCPLCRTP + +E +  F
Subjt:  MFRNRYPSIRFDKVQGS-ERLEHDCSVCLTQFEPESEINHL-SCGHLFHTECLEKWLDYWNITCPLCRTPLMSEEEKSCF

Q9ZT50 E3 ubiquitin-protein ligase RHA2A1.6e-1049.02Show/hide
Query:  DCSVCLTQFEPESEINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLMSEE
        DC VCL++ +   E+  L C H+FH +CLE WL  +N TCPLCR+ L+S++
Subjt:  DCSVCLTQFEPESEINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLMSEE

Q9ZU51 E3 ubiquitin-protein ligase RHA2B1.6e-1043.28Show/hide
Query:  NRYPSIRFDKVQGSERLEHDCSVCLTQFEPESEINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLM
        NR  S R+     S+    DC VCL++ +   E+  L C H+FH +CLE WL + N  CPLCR+PL+
Subjt:  NRYPSIRFDKVQGSERLEHDCSVCLTQFEPESEINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLM

Arabidopsis top hitse value%identityAlignment
AT1G15100.1 RING-H2 finger A2A1.1e-1149.02Show/hide
Query:  DCSVCLTQFEPESEINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLMSEE
        DC VCL++ +   E+  L C H+FH +CLE WL  +N TCPLCR+ L+S++
Subjt:  DCSVCLTQFEPESEINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLMSEE

AT1G67856.1 RING/U-box superfamily protein8.5e-1532.41Show/hide
Query:  MGLSSLPAPSEGVLNAILINAALSISIFKCIVRLILHIVGIRFSSPSSLVPSTDSFENSSELGDSNFGSSWSYLEMFRNRYPSIRFDKVQGSERLEHDCS
        MG+S  P  SEGV+  +++N  +S+S+ K +VR ++++V            S+++ E  ++  D +   S     +    + S+  ++   +ER   DC 
Subjt:  MGLSSLPAPSEGVLNAILINAALSISIFKCIVRLILHIVGIRFSSPSSLVPSTDSFENSSELGDSNFGSSWSYLEMFRNRYPSIRFDKVQGSERLEHDCS

Query:  VCLTQFEPESEINHL-SCGHLFHTECLEKWLDYWNITCPLCRTPL
        VCL  F+ E E++ L SC H FH+ CL+KW    + TCPLCR+ L
Subjt:  VCLTQFEPESEINHL-SCGHLFHTECLEKWLDYWNITCPLCRTPL

AT2G04240.1 RING/U-box superfamily protein7.6e-4060.67Show/hide
Query:  MGLSSLPAPSEGVLNAILINAALSISIFKCIVRLILHIVGIRFSSPSSLVPS--TDSFENS--SELGDSNFGSSWSYLEMFRNRYPSIRFDKV-QGSERL
        MGLSSLP PSEG+L  IL+N ALSISI K IVR  L IVGI   SPSS  PS  T S ENS  SE  D       SYLE FRNR P++RF+ + +  ++ 
Subjt:  MGLSSLPAPSEGVLNAILINAALSISIFKCIVRLILHIVGIRFSSPSSLVPS--TDSFENS--SELGDSNFGSSWSYLEMFRNRYPSIRFDKV-QGSERL

Query:  EHDCSVCLTQFEPESEINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLM
        +++CSVCL++F+ +SEIN L CGHLFH  CLEKW+DYWNITCPLCRTPL+
Subjt:  EHDCSVCLTQFEPESEINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLM

AT2G04240.2 RING/U-box superfamily protein7.6e-4060.67Show/hide
Query:  MGLSSLPAPSEGVLNAILINAALSISIFKCIVRLILHIVGIRFSSPSSLVPS--TDSFENS--SELGDSNFGSSWSYLEMFRNRYPSIRFDKV-QGSERL
        MGLSSLP PSEG+L  IL+N ALSISI K IVR  L IVGI   SPSS  PS  T S ENS  SE  D       SYLE FRNR P++RF+ + +  ++ 
Subjt:  MGLSSLPAPSEGVLNAILINAALSISIFKCIVRLILHIVGIRFSSPSSLVPS--TDSFENS--SELGDSNFGSSWSYLEMFRNRYPSIRFDKV-QGSERL

Query:  EHDCSVCLTQFEPESEINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLM
        +++CSVCL++F+ +SEIN L CGHLFH  CLEKW+DYWNITCPLCRTPL+
Subjt:  EHDCSVCLTQFEPESEINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLM

AT3G61460.1 brassinosteroid-responsive RING-H21.1e-1443.75Show/hide
Query:  MFRNRYPSIRFDKVQGS-ERLEHDCSVCLTQFEPESEINHL-SCGHLFHTECLEKWLDYWNITCPLCRTPLMSEEEKSCF
        + R   P I+F+++  S E L  +C+VCL +FE E EI  L +C H+FH  CL++W+D+   TCPLCRTP + +E +  F
Subjt:  MFRNRYPSIRFDKVQGS-ERLEHDCSVCLTQFEPESEINHL-SCGHLFHTECLEKWLDYWNITCPLCRTPLMSEEEKSCF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCTCTCCAGTCTTCCAGCTCCATCTGAAGGAGTCCTAAACGCAATTCTCATAAACGCTGCACTATCCATTTCCATCTTCAAATGCATTGTTCGTTTGATCCTTCA
CATTGTAGGAATCCGTTTCTCATCGCCATCATCCTTAGTCCCATCTACAGATTCCTTTGAAAATTCCTCAGAGTTGGGAGATTCCAACTTTGGCTCCTCTTGGAGTTACC
TCGAGATGTTTCGGAACAGATATCCAAGTATTAGGTTTGATAAAGTACAGGGCTCCGAACGTCTCGAACACGACTGCTCGGTCTGTTTAACTCAATTTGAACCTGAATCA
GAGATAAATCACTTATCTTGTGGCCATCTTTTTCACACAGAATGCTTGGAGAAGTGGCTGGATTACTGGAACATCACATGTCCTCTTTGCAGAACTCCTCTAATGTCAGA
AGAAGAGAAATCGTGCTTTTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCCTCTCCAGTCTTCCAGCTCCATCTGAAGGAGTCCTAAACGCAATTCTCATAAACGCTGCACTATCCATTTCCATCTTCAAATGCATTGTTCGTTTGATCCTTCA
CATTGTAGGAATCCGTTTCTCATCGCCATCATCCTTAGTCCCATCTACAGATTCCTTTGAAAATTCCTCAGAGTTGGGAGATTCCAACTTTGGCTCCTCTTGGAGTTACC
TCGAGATGTTTCGGAACAGATATCCAAGTATTAGGTTTGATAAAGTACAGGGCTCCGAACGTCTCGAACACGACTGCTCGGTCTGTTTAACTCAATTTGAACCTGAATCA
GAGATAAATCACTTATCTTGTGGCCATCTTTTTCACACAGAATGCTTGGAGAAGTGGCTGGATTACTGGAACATCACATGTCCTCTTTGCAGAACTCCTCTAATGTCAGA
AGAAGAGAAATCGTGCTTTTGGTGA
Protein sequenceShow/hide protein sequence
MGLSSLPAPSEGVLNAILINAALSISIFKCIVRLILHIVGIRFSSPSSLVPSTDSFENSSELGDSNFGSSWSYLEMFRNRYPSIRFDKVQGSERLEHDCSVCLTQFEPES
EINHLSCGHLFHTECLEKWLDYWNITCPLCRTPLMSEEEKSCFW