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Carg04147 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04147
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionsodium/potassium/calcium exchanger 1-like
Genome locationCarg_Chr19:7915594..7916112
RNA-Seq ExpressionCarg04147
SyntenyCarg04147
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572225.1 hypothetical protein SDJN03_28953, partial [Cucurbita argyrosperma subsp. sororia]4.2e-7397.18Show/hide
Query:  MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAESPGAAMEDSTTIIERKVEDGEERENG
        MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAESPGAAMEDSTTIIERKVEDGEERENG
Subjt:  MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAESPGAAMEDSTTIIERKVEDGEERENG

Query:  FIAEEEQEESERLVTEEEQQQEHEEQEEQ-----EEEEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL
        FIAEEEQEESERLVTEEEQQQEHEEQEEQ     EEEEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL
Subjt:  FIAEEEQEESERLVTEEEQQQEHEEQEEQ-----EEEEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL

KAG7011863.1 hypothetical protein SDJN02_26769, partial [Cucurbita argyrosperma subsp. argyrosperma]5.9e-75100Show/hide
Query:  MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAESPGAAMEDSTTIIERKVEDGEERENG
        MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAESPGAAMEDSTTIIERKVEDGEERENG
Subjt:  MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAESPGAAMEDSTTIIERKVEDGEERENG

Query:  FIAEEEQEESERLVTEEEQQQEHEEQEEQEEEEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL
        FIAEEEQEESERLVTEEEQQQEHEEQEEQEEEEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL
Subjt:  FIAEEEQEESERLVTEEEQQQEHEEQEEQEEEEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL

XP_022928452.1 uncharacterized protein LOC111435260 [Cucurbita moschata]5.2e-3966.28Show/hide
Query:  MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAESPGAAMEDSTTIIERKVEDGEERENG
        MKL+ISAS+LSAMVFYSSLLPFLHS NLYISAT HKNYMFLLCNGLLVFIVRNSGLIS SG    GG  SR AE+  A+M D ++ IE KVED EER NG
Subjt:  MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAESPGAAMEDSTTIIERKVEDGEERENG

Query:  FIAEEEQEESERLVTEEEQQQEHEEQEEQEEEEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL
         I  ++ EESER + E          ++  +++++ EEVGALS EEL+KK EEFIRKMKAGIKLESQQ+L+L
Subjt:  FIAEEEQEESERLVTEEEQQQEHEEQEEQEEEEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL

XP_022969273.1 sodium/potassium/calcium exchanger 1-like [Cucurbita maxima]1.4e-6895.93Show/hide
Query:  MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAESPGAAMEDSTTIIERKVEDGEERENG
        MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAE+ GAAMEDSTTIIERKVEDGEERENG
Subjt:  MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAESPGAAMEDSTTIIERKVEDGEERENG

Query:  FIAEEEQEESERLVTEEEQQQEHEEQEEQEEEEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL
        FIAEEEQ ESERLVTEEEQQQEHE  EEQEEE+ EAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL
Subjt:  FIAEEEQEESERLVTEEEQQQEHEEQEEQEEEEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL

XP_023530308.1 uncharacterized protein LOC111792915 [Cucurbita pepo subsp. pepo]1.4e-3966.86Show/hide
Query:  MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAESPGAAMEDSTTIIERKVEDGEERENG
        MKL+ISAS+LSAMVFYSSLLPFLHS NLYISAT HKNYMFLLCNGLLVFIVRNSGLIS SG    GG  SR AE+  AAM D ++ IE KVED EER NG
Subjt:  MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAESPGAAMEDSTTIIERKVEDGEERENG

Query:  FIAEEEQEESERLVTEEEQQQEHEEQEEQEEEEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL
         I  ++ EESER + E             ++++++ EEVGALS EEL+KK EEFIRKMKAGIKLESQQ+L+L
Subjt:  FIAEEEQEESERLVTEEEQQQEHEEQEEQEEEEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL

TrEMBL top hitse value%identityAlignment
A0A0A0K349 Uncharacterized protein1.1e-3162.43Show/hide
Query:  MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAESPGAA-MEDSTTIIERKVEDGEEREN
        MKLVISAS+LSAMVFYSSLLPFLHSLNLYIS+TIHKNYMFLLCNGLLVFIVRNSGLI ++  E+  G+     E+ GAA M D    IE KVE  EER N
Subjt:  MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAESPGAA-MEDSTTIIERKVEDGEEREN

Query:  GFIAEEEQEESERLVTEEEQQQEHEEQEEQEEEEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL
        G +  E  ++ E L+T+ E ++E     E+EEEEE         +EEL+KK EEFIRKMKAGIK ESQQ+ IL
Subjt:  GFIAEEEQEESERLVTEEEQQQEHEEQEEQEEEEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL

A0A1S3CG16 gem-associated protein 2-like1.5e-2860.84Show/hide
Query:  MVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAESPGAAMEDSTTIIERK--VEDGEERENGFIAEEEQEES
        MVFYSSLLPFLHSLNLYIS+TIHKNYMFLLCNGLLVFIVRNSGLI ++    C    SR        M D    IE K  VE  EER NG +  E  E+ 
Subjt:  MVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAESPGAAMEDSTTIIERK--VEDGEERENGFIAEEEQEES

Query:  ERLVTEEEQQQE----HEEQEEQEEEEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL
        E L+T+ E ++E    +EE+EE+EEEEEE EE   + +EEL+KK EEFIRKMKAGIK ESQQ+ IL
Subjt:  ERLVTEEEQQQE----HEEQEEQEEEEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL

A0A6J1C4P4 ATP-dependent RNA helicase MAK52.8e-3867.25Show/hide
Query:  MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAESPGAAMEDSTTIIERKVEDGEERENG
        MK++ISAS+LSAMV YSSLLPFLHSLNLYISATIHKNY+FLLCNGLLVFIVRNSGLI  SG EQ GG G                 +E KVEDGEERENG
Subjt:  MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAESPGAAMEDSTTIIERKVEDGEERENG

Query:  FIAEEEQEESERLVTEEEQQQEHEEQEEQEEEEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLI
         +A  EQEESE+L+TE+E   EHEE+EE+EEE+      G LSNEEL++K EEFIRKMKA IK E QQVL+
Subjt:  FIAEEEQEESERLVTEEEQQQEHEEQEEQEEEEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLI

A0A6J1EJY9 uncharacterized protein LOC1114352602.5e-3966.28Show/hide
Query:  MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAESPGAAMEDSTTIIERKVEDGEERENG
        MKL+ISAS+LSAMVFYSSLLPFLHS NLYISAT HKNYMFLLCNGLLVFIVRNSGLIS SG    GG  SR AE+  A+M D ++ IE KVED EER NG
Subjt:  MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAESPGAAMEDSTTIIERKVEDGEERENG

Query:  FIAEEEQEESERLVTEEEQQQEHEEQEEQEEEEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL
         I  ++ EESER + E          ++  +++++ EEVGALS EEL+KK EEFIRKMKAGIKLESQQ+L+L
Subjt:  FIAEEEQEESERLVTEEEQQQEHEEQEEQEEEEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL

A0A6J1I0H9 sodium/potassium/calcium exchanger 1-like6.8e-6995.93Show/hide
Query:  MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAESPGAAMEDSTTIIERKVEDGEERENG
        MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAE+ GAAMEDSTTIIERKVEDGEERENG
Subjt:  MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAESPGAAMEDSTTIIERKVEDGEERENG

Query:  FIAEEEQEESERLVTEEEQQQEHEEQEEQEEEEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL
        FIAEEEQ ESERLVTEEEQQQEHE  EEQEEE+ EAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL
Subjt:  FIAEEEQEESERLVTEEEQQQEHEEQEEQEEEEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTGGTGATTTCAGCTTCTGTGCTCTCTGCAATGGTGTTTTACTCATCTCTCCTCCCTTTCCTCCACTCTTTGAACCTTTATATCTCTGCAACAATCCACAAAAA
CTACATGTTCTTGCTCTGCAATGGCCTCCTTGTCTTCATCGTCCGAAACTCCGGTCTTATCAGTAGCTCTGGCCGCGAACAGTGCGGCGGACATGGCAGCAGAGAAGCTG
AATCTCCAGGGGCTGCAATGGAGGATTCCACCACAATAATTGAGAGAAAAGTTGAAGATGGAGAAGAAAGGGAAAATGGGTTTATTGCAGAAGAAGAACAAGAAGAAAGT
GAAAGATTGGTTACAGAAGAAGAACAACAACAAGAACACGAAGAACAAGAAGAACAAGAAGAAGAAGAAGAAGAAGCAGAAGAAGTTGGGGCTTTGAGCAATGAAGAATT
GGACAAGAAATTTGAAGAATTTATCAGAAAAATGAAGGCAGGAATCAAACTTGAATCACAGCAAGTGCTTATTTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTTGGTGATTTCAGCTTCTGTGCTCTCTGCAATGGTGTTTTACTCATCTCTCCTCCCTTTCCTCCACTCTTTGAACCTTTATATCTCTGCAACAATCCACAAAAA
CTACATGTTCTTGCTCTGCAATGGCCTCCTTGTCTTCATCGTCCGAAACTCCGGTCTTATCAGTAGCTCTGGCCGCGAACAGTGCGGCGGACATGGCAGCAGAGAAGCTG
AATCTCCAGGGGCTGCAATGGAGGATTCCACCACAATAATTGAGAGAAAAGTTGAAGATGGAGAAGAAAGGGAAAATGGGTTTATTGCAGAAGAAGAACAAGAAGAAAGT
GAAAGATTGGTTACAGAAGAAGAACAACAACAAGAACACGAAGAACAAGAAGAACAAGAAGAAGAAGAAGAAGAAGCAGAAGAAGTTGGGGCTTTGAGCAATGAAGAATT
GGACAAGAAATTTGAAGAATTTATCAGAAAAATGAAGGCAGGAATCAAACTTGAATCACAGCAAGTGCTTATTTTGTAA
Protein sequenceShow/hide protein sequence
MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAESPGAAMEDSTTIIERKVEDGEERENGFIAEEEQEES
ERLVTEEEQQQEHEEQEEQEEEEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL