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Carg04163 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04163
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProtochlorophyllide reductase
Genome locationCarg_Chr19:8001933..8002256
RNA-Seq ExpressionCarg04163
SyntenyCarg04163
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572248.1 hypothetical protein SDJN03_28976, partial [Cucurbita argyrosperma subsp. sororia]3.5e-54100Show/hide
Query:  MWRLAAAVRRNLHNIRKSPRVADESMYSAGGGADGGGRVIDGNRRDGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDS
        MWRLAAAVRRNLHNIRKSPRVADESMYSAGGGADGGGRVIDGNRRDGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDS
Subjt:  MWRLAAAVRRNLHNIRKSPRVADESMYSAGGGADGGGRVIDGNRRDGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDS

Query:  MRYAILM
        MRYAILM
Subjt:  MRYAILM
XP_022969305.1 uncharacterized protein LOC111468352 [Cucurbita maxima]2.5e-5297.2Show/hide
Query:  MWRLAAAVRRNLHNIRKSPRVADESMYSAGGGADGGGRVIDGNRRDGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDS
        MWRLAAAVRRNLHNIRKSPRVADESMYSAGGGADGG  VIDGNRR+GNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDS
Subjt:  MWRLAAAVRRNLHNIRKSPRVADESMYSAGGGADGGGRVIDGNRRDGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDS

Query:  MRYAILM
        MRYAILM
Subjt:  MRYAILM
XP_023554647.1 uncharacterized protein LOC111811837 [Cucurbita pepo subsp. pepo]2.2e-5196.26Show/hide
Query:  MWRLAAAVRRNLHNIRKSPRVADESMYSAGGGADGGGRVIDGNRRDGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDS
        MWRLAAAVRRNLHNIRKSPRVADESMYSAGGGADGG  VIDGNRR+ NSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDS
Subjt:  MWRLAAAVRRNLHNIRKSPRVADESMYSAGGGADGGGRVIDGNRRDGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDS

Query:  MRYAILM
        MRYAILM
Subjt:  MRYAILM
XP_031744820.1 uncharacterized protein LOC101211016 [Cucumis sativus]8.5e-4890Show/hide
Query:  MWRLAAAVRRNLHNIRKSPRVADESMYSAGGGADGGGR---VIDGNRRDGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMV
        MWRLAAAVRRNLHNIRKSPRVADESMY  GGG DGGGR   V+DG+RR+GNSYGFSMIY+LLRTPFS+LSCFSQPHVNGVDGMWVSGEFPRISEVNHLMV
Subjt:  MWRLAAAVRRNLHNIRKSPRVADESMYSAGGGADGGGR---VIDGNRRDGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMV

Query:  SDSMRYAILM
        SDSMRYAILM
Subjt:  SDSMRYAILM
XP_038888385.1 uncharacterized protein LOC120078235 [Benincasa hispida]6.5e-4888.39Show/hide
Query:  MWRLAAAVRRNLHNIRKSPRVADESMY--SAGGGADGGGR---VIDGNRRDGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHL
        MWRLAAAVRRNLHNIRKSPRVADESMY  + GGG DGGGR   V+DG+RR+GNSYGFSMIY+LLRTPFS+LSCFSQPHVNGVDGMWVSGEFPRISEVNHL
Subjt:  MWRLAAAVRRNLHNIRKSPRVADESMY--SAGGGADGGGR---VIDGNRRDGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHL

Query:  MVSDSMRYAILM
        MVSDSMRYAILM
Subjt:  MVSDSMRYAILM
TrEMBL top hitse value%identityAlignment
A0A1S3C134 uncharacterized protein LOC1034956671.2e-4284.91Show/hide
Query:  MWRLAAAVRRNLHNIRKSPRVADESMYSAGGGADGGGR----VIDGNRRDGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLM
        MWRLAAAVRRNLHNIRKSPRVADESMY  GGG DGGGR    V+DG+RR+GNSYGFSMIY+LLRTPFS+LSCFSQPHVNGVDGMWVSGEFPRISEVNHLM
Subjt:  MWRLAAAVRRNLHNIRKSPRVADESMYSAGGGADGGGR----VIDGNRRDGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLM

Query:  VSDSMR
         S+  R
Subjt:  VSDSMR
A0A5D3BTM8 Uncharacterized protein5.4e-4889.19Show/hide
Query:  MWRLAAAVRRNLHNIRKSPRVADESMYSAGGGADGGGR----VIDGNRRDGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLM
        MWRLAAAVRRNLHNIRKSPRVADESMY  GGG DGGGR    V+DG+RR+GNSYGFSMIY+LLRTPFS+LSCFSQPHVNGVDGMWVSGEFPRISEVNHLM
Subjt:  MWRLAAAVRRNLHNIRKSPRVADESMYSAGGGADGGGR----VIDGNRRDGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLM

Query:  VSDSMRYAILM
        VSDSMRYAILM
Subjt:  VSDSMRYAILM
A0A6J1C6U0 uncharacterized protein LOC1110079085.2e-4383.18Show/hide
Query:  MWRLAAAVRRNLHNIRKSPRVADESMYSAGGGADGGGRVIDGNRRDGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDS
        MWRLAA +RRNLHNIRKSPRVADESMY  GGG DGGG V + +RR GNSYGFSMIY++LRTPFS+L CFSQPHVNG DG+WVSGEF RISEVNHLMVSDS
Subjt:  MWRLAAAVRRNLHNIRKSPRVADESMYSAGGGADGGGRVIDGNRRDGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDS

Query:  MRYAILM
        MRYAILM
Subjt:  MRYAILM
A0A6J1ER34 uncharacterized protein LOC1114370335.7e-4283.33Show/hide
Query:  MWRLAAAVRRNLHNIRKSPRVADESMYSAGGGADGGGRVID-GNRRDGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSD
        MWRLAAAVR  LHNIRKSPRVADESM+S GGG DGGGRV+D G RR+ NS+G S+IY +LRTPFS LSCFS PHVNGVDGMWVSGEF RISEVNHLMVSD
Subjt:  MWRLAAAVRRNLHNIRKSPRVADESMYSAGGGADGGGRVID-GNRRDGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSD

Query:  SMRYAILM
        SMRYAILM
Subjt:  SMRYAILM
A0A6J1HZK3 uncharacterized protein LOC1114683521.2e-5297.2Show/hide
Query:  MWRLAAAVRRNLHNIRKSPRVADESMYSAGGGADGGGRVIDGNRRDGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDS
        MWRLAAAVRRNLHNIRKSPRVADESMYSAGGGADGG  VIDGNRR+GNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDS
Subjt:  MWRLAAAVRRNLHNIRKSPRVADESMYSAGGGADGGGRVIDGNRRDGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDS

Query:  MRYAILM
        MRYAILM
Subjt:  MRYAILM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G04795.1 unknown protein9.4e-2149.07Show/hide
Query:  MWRLAAAVRRNLHNIRKSPRVADES-MYSAGGGADGGGRVIDGNRRDGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSD
        M ++ + +RRNL N+RKSPRVADES + S     D GG    GN  +G          +++ P S++SCFS P V+  DG+WVSG++ R+SEVNHLMV D
Subjt:  MWRLAAAVRRNLHNIRKSPRVADES-MYSAGGGADGGGRVIDGNRRDGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSD

Query:  SMRYAILM
         MRYA+LM
Subjt:  SMRYAILM
AT5G35732.1 unknown protein8.2e-2552.34Show/hide
Query:  MWRLAAAVRRNLHNIRKSPRVADESMYSAGGGADGGGRVIDGNRRDGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDS
        M ++ + +RRNL N+RKSPRVAD++   +     G G V +G R   NS        ++R PFS++SCF+ P V+G DG+WVSG++  ISEVNHLMVSDS
Subjt:  MWRLAAAVRRNLHNIRKSPRVADESMYSAGGGADGGGRVIDGNRRDGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDS

Query:  MRYAILM
        MRYAILM
Subjt:  MRYAILM

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGCGGTTGGCGGCGGCCGTGAGAAGAAACCTCCACAACATAAGGAAGAGCCCACGAGTGGCAGATGAAAGCATGTACAGCGCCGGCGGCGGAGCTGACGGCGGAGG
TAGGGTAATCGATGGCAACCGGAGAGACGGAAATTCATATGGGTTTTCAATGATTTACACTCTCCTTCGAACCCCATTTTCGCTTCTCTCTTGCTTCTCTCAACCTCACG
TTAATGGCGTCGACGGGATGTGGGTCTCCGGCGAGTTTCCAAGAATCTCGGAAGTTAATCATCTTATGGTAAGCGACAGCATGCGATATGCAATCTTAATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGGCGGTTGGCGGCGGCCGTGAGAAGAAACCTCCACAACATAAGGAAGAGCCCACGAGTGGCAGATGAAAGCATGTACAGCGCCGGCGGCGGAGCTGACGGCGGAGG
TAGGGTAATCGATGGCAACCGGAGAGACGGAAATTCATATGGGTTTTCAATGATTTACACTCTCCTTCGAACCCCATTTTCGCTTCTCTCTTGCTTCTCTCAACCTCACG
TTAATGGCGTCGACGGGATGTGGGTCTCCGGCGAGTTTCCAAGAATCTCGGAAGTTAATCATCTTATGGTAAGCGACAGCATGCGATATGCAATCTTAATGTAA
Protein sequenceShow/hide protein sequence
MWRLAAAVRRNLHNIRKSPRVADESMYSAGGGADGGGRVIDGNRRDGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM