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Carg04170 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04170
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCalcium-binding EF-hand family protein
Genome locationCarg_Chr19:8026134..8026550
RNA-Seq ExpressionCarg04170
SyntenyCarg04170
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008455503.1 PREDICTED: uncharacterized protein LOC103495655 [Cucumis melo]2.3e-5886.96Show/hide
Query:  MSVEILDSATIVSFVEDEEAFRATITEHFRELDMDRDGVLSYGEMLKELQSLRVLETHFGVDVKPDPEELSSVYASLFSQFDRDCNGKVDLGEFMAETRK
        MSVEILDSATIV+FVEDEEAF   I E F  LDMDRDGVL YGEMLKELQSLRV ETHFG+D KPDP ELSSVYASLF QFDRDCNGKVDLGEFMAET+K
Subjt:  MSVEILDSATIVSFVEDEEAFRATITEHFRELDMDRDGVLSYGEMLKELQSLRVLETHFGVDVKPDPEELSSVYASLFSQFDRDCNGKVDLGEFMAETRK

Query:  MMLAMANGIGLSPVRMVLEENSFLKKAVDRESTKLAVA
        MMLAMANGIGLSPV+M+LEENSFLKKAVDRESTKLA A
Subjt:  MMLAMANGIGLSPVRMVLEENSFLKKAVDRESTKLAVA

XP_022952569.1 uncharacterized protein LOC111455222 [Cucurbita moschata]4.3e-68100Show/hide
Query:  MSVEILDSATIVSFVEDEEAFRATITEHFRELDMDRDGVLSYGEMLKELQSLRVLETHFGVDVKPDPEELSSVYASLFSQFDRDCNGKVDLGEFMAETRK
        MSVEILDSATIVSFVEDEEAFRATITEHFRELDMDRDGVLSYGEMLKELQSLRVLETHFGVDVKPDPEELSSVYASLFSQFDRDCNGKVDLGEFMAETRK
Subjt:  MSVEILDSATIVSFVEDEEAFRATITEHFRELDMDRDGVLSYGEMLKELQSLRVLETHFGVDVKPDPEELSSVYASLFSQFDRDCNGKVDLGEFMAETRK

Query:  MMLAMANGIGLSPVRMVLEENSFLKKAVDRESTKLAVA
        MMLAMANGIGLSPVRMVLEENSFLKKAVDRESTKLAVA
Subjt:  MMLAMANGIGLSPVRMVLEENSFLKKAVDRESTKLAVA

XP_022969296.1 uncharacterized protein LOC111468345 [Cucurbita maxima]4.0e-6696.38Show/hide
Query:  MSVEILDSATIVSFVEDEEAFRATITEHFRELDMDRDGVLSYGEMLKELQSLRVLETHFGVDVKPDPEELSSVYASLFSQFDRDCNGKVDLGEFMAETRK
        MSVEILDSATIVSFVEDEEAFRATITEHFRELD+DRDGVLSYGEML+ELQSLRVLETHFGVDVKPDPEELSSVYASLFSQFDRDCNGK+DLGEFMAETRK
Subjt:  MSVEILDSATIVSFVEDEEAFRATITEHFRELDMDRDGVLSYGEMLKELQSLRVLETHFGVDVKPDPEELSSVYASLFSQFDRDCNGKVDLGEFMAETRK

Query:  MMLAMANGIGLSPVRMVLEENSFLKKAVDRESTKLAVA
        MML MANGIGLSPVRMVLEENSFLKKAVDRESTKL VA
Subjt:  MMLAMANGIGLSPVRMVLEENSFLKKAVDRESTKLAVA

XP_023554639.1 uncharacterized protein LOC111811829 [Cucurbita pepo subsp. pepo]2.1e-6799.28Show/hide
Query:  MSVEILDSATIVSFVEDEEAFRATITEHFRELDMDRDGVLSYGEMLKELQSLRVLETHFGVDVKPDPEELSSVYASLFSQFDRDCNGKVDLGEFMAETRK
        MSVEILDSATIVSFVEDEEAFRATITEHFRELDMDRDGVLSYGEMLKELQSLRVLETHFGVDVKPDPEELSSVYASLFSQFDRDCNGKVDLGEFMAETRK
Subjt:  MSVEILDSATIVSFVEDEEAFRATITEHFRELDMDRDGVLSYGEMLKELQSLRVLETHFGVDVKPDPEELSSVYASLFSQFDRDCNGKVDLGEFMAETRK

Query:  MMLAMANGIGLSPVRMVLEENSFLKKAVDRESTKLAVA
        MMLAMANGIGLSPVRMVLEENS LKKAVDRESTKLAVA
Subjt:  MMLAMANGIGLSPVRMVLEENSFLKKAVDRESTKLAVA

XP_038888629.1 uncharacterized protein LOC120078427 [Benincasa hispida]1.4e-5886.23Show/hide
Query:  MSVEILDSATIVSFVEDEEAFRATITEHFRELDMDRDGVLSYGEMLKELQSLRVLETHFGVDVKPDPEELSSVYASLFSQFDRDCNGKVDLGEFMAETRK
        MSVEILDSATIV+FVEDEEAF  +I E F  LD+DRDGVL YGEMLKELQSLRVLETHFG+D KPDP+ELSSVY SLFSQFDRDCNGKVDLGEFMAET+K
Subjt:  MSVEILDSATIVSFVEDEEAFRATITEHFRELDMDRDGVLSYGEMLKELQSLRVLETHFGVDVKPDPEELSSVYASLFSQFDRDCNGKVDLGEFMAETRK

Query:  MMLAMANGIGLSPVRMVLEENSFLKKAVDRESTKLAVA
        MMLAMANGIG SPV+M+LEENSFLKKAVDRESTKLA A
Subjt:  MMLAMANGIGLSPVRMVLEENSFLKKAVDRESTKLAVA

TrEMBL top hitse value%identityAlignment
A0A0A0K1Y0 Calcium ion binding protein1.1e-5684.06Show/hide
Query:  MSVEILDSATIVSFVEDEEAFRATITEHFRELDMDRDGVLSYGEMLKELQSLRVLETHFGVDVKPDPEELSSVYASLFSQFDRDCNGKVDLGEFMAETRK
        MSVEIL+SATI++FVEDEEAF   I E F  LD+DRDGVL YGEMLKELQSLRVLETHFG+D KPDP ELSSVY SLF QFDRDCNGKVDLGEFM ET+K
Subjt:  MSVEILDSATIVSFVEDEEAFRATITEHFRELDMDRDGVLSYGEMLKELQSLRVLETHFGVDVKPDPEELSSVYASLFSQFDRDCNGKVDLGEFMAETRK

Query:  MMLAMANGIGLSPVRMVLEENSFLKKAVDRESTKLAVA
        MMLAMANGIGLSPV+M+LEENSFLKKAVDRESTKLA A
Subjt:  MMLAMANGIGLSPVRMVLEENSFLKKAVDRESTKLAVA

A0A1S3C1T0 uncharacterized protein LOC1034956551.1e-5886.96Show/hide
Query:  MSVEILDSATIVSFVEDEEAFRATITEHFRELDMDRDGVLSYGEMLKELQSLRVLETHFGVDVKPDPEELSSVYASLFSQFDRDCNGKVDLGEFMAETRK
        MSVEILDSATIV+FVEDEEAF   I E F  LDMDRDGVL YGEMLKELQSLRV ETHFG+D KPDP ELSSVYASLF QFDRDCNGKVDLGEFMAET+K
Subjt:  MSVEILDSATIVSFVEDEEAFRATITEHFRELDMDRDGVLSYGEMLKELQSLRVLETHFGVDVKPDPEELSSVYASLFSQFDRDCNGKVDLGEFMAETRK

Query:  MMLAMANGIGLSPVRMVLEENSFLKKAVDRESTKLAVA
        MMLAMANGIGLSPV+M+LEENSFLKKAVDRESTKLA A
Subjt:  MMLAMANGIGLSPVRMVLEENSFLKKAVDRESTKLAVA

A0A5D3DDG8 Calcium-binding EF-hand family protein1.1e-5886.96Show/hide
Query:  MSVEILDSATIVSFVEDEEAFRATITEHFRELDMDRDGVLSYGEMLKELQSLRVLETHFGVDVKPDPEELSSVYASLFSQFDRDCNGKVDLGEFMAETRK
        MSVEILDSATIV+FVEDEEAF   I E F  LDMDRDGVL YGEMLKELQSLRV ETHFG+D KPDP ELSSVYASLF QFDRDCNGKVDLGEFMAET+K
Subjt:  MSVEILDSATIVSFVEDEEAFRATITEHFRELDMDRDGVLSYGEMLKELQSLRVLETHFGVDVKPDPEELSSVYASLFSQFDRDCNGKVDLGEFMAETRK

Query:  MMLAMANGIGLSPVRMVLEENSFLKKAVDRESTKLAVA
        MMLAMANGIGLSPV+M+LEENSFLKKAVDRESTKLA A
Subjt:  MMLAMANGIGLSPVRMVLEENSFLKKAVDRESTKLAVA

A0A6J1GM29 uncharacterized protein LOC1114552222.1e-68100Show/hide
Query:  MSVEILDSATIVSFVEDEEAFRATITEHFRELDMDRDGVLSYGEMLKELQSLRVLETHFGVDVKPDPEELSSVYASLFSQFDRDCNGKVDLGEFMAETRK
        MSVEILDSATIVSFVEDEEAFRATITEHFRELDMDRDGVLSYGEMLKELQSLRVLETHFGVDVKPDPEELSSVYASLFSQFDRDCNGKVDLGEFMAETRK
Subjt:  MSVEILDSATIVSFVEDEEAFRATITEHFRELDMDRDGVLSYGEMLKELQSLRVLETHFGVDVKPDPEELSSVYASLFSQFDRDCNGKVDLGEFMAETRK

Query:  MMLAMANGIGLSPVRMVLEENSFLKKAVDRESTKLAVA
        MMLAMANGIGLSPVRMVLEENSFLKKAVDRESTKLAVA
Subjt:  MMLAMANGIGLSPVRMVLEENSFLKKAVDRESTKLAVA

A0A6J1HXE4 uncharacterized protein LOC1114683451.9e-6696.38Show/hide
Query:  MSVEILDSATIVSFVEDEEAFRATITEHFRELDMDRDGVLSYGEMLKELQSLRVLETHFGVDVKPDPEELSSVYASLFSQFDRDCNGKVDLGEFMAETRK
        MSVEILDSATIVSFVEDEEAFRATITEHFRELD+DRDGVLSYGEML+ELQSLRVLETHFGVDVKPDPEELSSVYASLFSQFDRDCNGK+DLGEFMAETRK
Subjt:  MSVEILDSATIVSFVEDEEAFRATITEHFRELDMDRDGVLSYGEMLKELQSLRVLETHFGVDVKPDPEELSSVYASLFSQFDRDCNGKVDLGEFMAETRK

Query:  MMLAMANGIGLSPVRMVLEENSFLKKAVDRESTKLAVA
        MML MANGIGLSPVRMVLEENSFLKKAVDRESTKL VA
Subjt:  MMLAMANGIGLSPVRMVLEENSFLKKAVDRESTKLAVA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54530.1 Calcium-binding EF hand family protein6.0e-1232.81Show/hide
Query:  ILDSATIVSFVEDEEAFRATITEHFRELDMDRDGVLSYGEMLKELQSLRVLETHFGVDVKPDPEELSSVYASLFSQFDRDCNGKVDLGEFMAETRKMMLA
        ++ S T++ F+ D ++F +   ++F+ LD+D++G+LS  E+ + L ++  +E+    +V P  +E  +VY ++F +F  D   K +  + +AE   ++ A
Subjt:  ILDSATIVSFVEDEEAFRATITEHFRELDMDRDGVLSYGEMLKELQSLRVLETHFGVDVKPDPEELSSVYASLFSQFDRDCNGKVDLGEFMAETRKMMLA

Query:  MANGIGLSPVRMVLEENSFLKKAVDRES
        MA GIG SPV MV+  +  + KAV  ES
Subjt:  MANGIGLSPVRMVLEENSFLKKAVDRES

AT2G44310.1 Calcium-binding EF-hand family protein8.1e-3347.86Show/hide
Query:  MSVEILDSATIVSFVEDEEAFRATITEHFRELDMDRDGVLSYGEMLKELQSLRVLETHFGVDVKPDPEELSSVYASLFSQFDRDCNGKVDLGEFMAETRK
        M V ++D +T+ SFV+DEE F+ ++ E F  LD+++DGVLS  E+ K  +S+R+LE+HFGVDV    +EL+++Y S+F +FD D +G VDL EF +E +K
Subjt:  MSVEILDSATIVSFVEDEEAFRATITEHFRELDMDRDGVLSYGEMLKELQSLRVLETHFGVDVKPDPEELSSVYASLFSQFDRDCNGKVDLGEFMAETRK

Query:  MMLAMANGIGLSPVRMVL--EENSFLKKAVDRESTKLAVA
        ++LA+A+G+G  P+ MVL  ++++FLKKA D E++KL  A
Subjt:  MMLAMANGIGLSPVRMVL--EENSFLKKAVDRESTKLAVA

AT4G38810.2 Calcium-binding EF-hand family protein2.6e-0724.8Show/hide
Query:  EILDSATIVSFVEDEEAFRATITEHFRELDMDRDGVLSYGEMLKELQSLRVLETHFGVDVKPDPEELSSVYASLFSQFDRDCNGKVDLGEFMAETRKMML
        ++LD + IV  VE+E+ F   + + F++LD D DG LS  E+   +  +       G+  +    +   +Y+ + ++F      KV   EF      ++L
Subjt:  EILDSATIVSFVEDEEAFRATITEHFRELDMDRDGVLSYGEMLKELQSLRVLETHFGVDVKPDPEELSSVYASLFSQFDRDCNGKVDLGEFMAETRKMML

Query:  AMANGIGLSPVRMVLEENSFLKKAV
         MA G+   P+ ++  +   L + V
Subjt:  AMANGIGLSPVRMVLEENSFLKKAV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGTAGAAATCTTGGACAGTGCTACGATCGTGAGCTTCGTGGAAGACGAAGAGGCATTCAGAGCGACAATTACAGAGCATTTCAGGGAGCTTGACATGGACAGAGA
TGGGGTTCTTTCTTACGGAGAGATGCTGAAGGAGTTGCAGAGTCTTAGAGTGTTGGAGACCCATTTTGGAGTGGATGTGAAACCCGACCCGGAAGAGCTTTCCTCTGTTT
ATGCATCGTTGTTCTCGCAGTTTGATCGGGACTGCAATGGGAAAGTTGATCTGGGTGAGTTCATGGCTGAAACCAGGAAGATGATGCTGGCCATGGCTAATGGTATTGGC
CTTTCTCCTGTTCGAATGGTGTTGGAAGAGAATAGTTTCTTGAAGAAAGCTGTGGACAGAGAATCAACCAAACTCGCTGTTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCGTAGAAATCTTGGACAGTGCTACGATCGTGAGCTTCGTGGAAGACGAAGAGGCATTCAGAGCGACAATTACAGAGCATTTCAGGGAGCTTGACATGGACAGAGA
TGGGGTTCTTTCTTACGGAGAGATGCTGAAGGAGTTGCAGAGTCTTAGAGTGTTGGAGACCCATTTTGGAGTGGATGTGAAACCCGACCCGGAAGAGCTTTCCTCTGTTT
ATGCATCGTTGTTCTCGCAGTTTGATCGGGACTGCAATGGGAAAGTTGATCTGGGTGAGTTCATGGCTGAAACCAGGAAGATGATGCTGGCCATGGCTAATGGTATTGGC
CTTTCTCCTGTTCGAATGGTGTTGGAAGAGAATAGTTTCTTGAAGAAAGCTGTGGACAGAGAATCAACCAAACTCGCTGTTGCTTGA
Protein sequenceShow/hide protein sequence
MSVEILDSATIVSFVEDEEAFRATITEHFRELDMDRDGVLSYGEMLKELQSLRVLETHFGVDVKPDPEELSSVYASLFSQFDRDCNGKVDLGEFMAETRKMMLAMANGIG
LSPVRMVLEENSFLKKAVDRESTKLAVA