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Carg04171 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04171
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCalcium-binding EF-hand family protein
Genome locationCarg_Chr19:8028075..8028488
RNA-Seq ExpressionCarg04171
SyntenyCarg04171
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022952573.1 uncharacterized protein LOC111455224 [Cucurbita moschata]1.6e-67100Show/hide
Query:  MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFEIDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKR
        MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFEIDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKR
Subjt:  MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFEIDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKR

Query:  MMLGMANGMGFLPVQMVLEEGSLLMKAVERETGVMAT
        MMLGMANGMGFLPVQMVLEEGSLLMKAVERETGVMAT
Subjt:  MMLGMANGMGFLPVQMVLEEGSLLMKAVERETGVMAT

XP_022969294.1 uncharacterized protein LOC111468343 [Cucurbita maxima]2.2e-6495.62Show/hide
Query:  MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFEIDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKR
        MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEML ELQSLRVTQNDFEIDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEF+TETKR
Subjt:  MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFEIDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKR

Query:  MMLGMANGMGFLPVQMVLEEGSLLMKAVERETGVMAT
        MMLGMANGMGFLPVQM+LEEGS LMKAVE ET VMAT
Subjt:  MMLGMANGMGFLPVQMVLEEGSLLMKAVERETGVMAT

XP_023554640.1 uncharacterized protein LOC111811830 [Cucurbita pepo subsp. pepo]8.0e-6799.27Show/hide
Query:  MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFEIDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKR
        MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFEIDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKR
Subjt:  MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFEIDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKR

Query:  MMLGMANGMGFLPVQMVLEEGSLLMKAVERETGVMAT
        MMLGMANGMGFLPVQMVLEEGSLLMKAVERET VMAT
Subjt:  MMLGMANGMGFLPVQMVLEEGSLLMKAVERETGVMAT

XP_038887952.1 uncharacterized protein LOC120077919 [Benincasa hispida]5.9e-5483.09Show/hide
Query:  MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFEIDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKR
        MSVEILDS TIVNFVEDEAAF A+IR+RF HLDTNHDG LSY+EMLEELQSLRV + DF  D KLDP+E+SSVYS+LFLQFDRD +GTVDLDEFKTETKR
Subjt:  MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFEIDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKR

Query:  MMLGMANGMGFLPVQMVLEEGSLLMKAVERETGVMA
        MML MANG+GFLPVQMVLEEGS LMKAVERET +MA
Subjt:  MMLGMANGMGFLPVQMVLEEGSLLMKAVERETGVMA

XP_038888297.1 uncharacterized protein LOC120078146 [Benincasa hispida]3.5e-5483.09Show/hide
Query:  MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFEIDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKR
        MSVEILDS TIVNFVED+ AFGAFIR+RFAHLDTNHDGLLSY+EMLEEL +LRV +  F IDVK DPDE+SSVYS+LFLQFDRD +GTVDLDEF  ETKR
Subjt:  MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFEIDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKR

Query:  MMLGMANGMGFLPVQMVLEEGSLLMKAVERETGVMA
        MML MANGMGFLPVQMVLEEGS LMKAVERET +MA
Subjt:  MMLGMANGMGFLPVQMVLEEGSLLMKAVERETGVMA

TrEMBL top hitse value%identityAlignment
A0A0A0KHT7 Uncharacterized protein1.1e-5382.35Show/hide
Query:  MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFEIDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKR
        MSVEILDS TIVNFVED+ AFGAFIR+RFAHLDTN DGLLSYSEMLEEL +LRV +  F IDVK DPDE+SSVYS+LFLQFDRD +GTVDLDEF+ ETKR
Subjt:  MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFEIDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKR

Query:  MMLGMANGMGFLPVQMVLEEGSLLMKAVERETGVMA
        MML MANGMGFLPVQMVLEEGS LMKAVERET + A
Subjt:  MMLGMANGMGFLPVQMVLEEGSLLMKAVERETGVMA

A0A1S3BLY5 uncharacterized protein LOC1034912948.4e-5482.35Show/hide
Query:  MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFEIDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKR
        MSVEILDS TIVNFVED+ AFGAFIR+RFAHLDTNHDGLLSYSEMLEEL +LRV +  F IDVK DP+E+SSVYS+LFLQFD D +GTVDLDEFK ETKR
Subjt:  MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFEIDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKR

Query:  MMLGMANGMGFLPVQMVLEEGSLLMKAVERETGVMA
        MML MANGMGFLPVQMVLEEGS LMKAVERET + A
Subjt:  MMLGMANGMGFLPVQMVLEEGSLLMKAVERETGVMA

A0A5D3E445 Calcium-binding EF-hand family protein8.4e-5482.35Show/hide
Query:  MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFEIDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKR
        MSVEILDS TIVNFVED+ AFGAFIR+RFAHLDTNHDGLLSYSEMLEEL +LRV +  F IDVK DP+E+SSVYS+LFLQFD D +GTVDLDEFK ETKR
Subjt:  MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFEIDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKR

Query:  MMLGMANGMGFLPVQMVLEEGSLLMKAVERETGVMA
        MML MANGMGFLPVQMVLEEGS LMKAVERET + A
Subjt:  MMLGMANGMGFLPVQMVLEEGSLLMKAVERETGVMA

A0A6J1GKZ8 uncharacterized protein LOC1114552247.8e-68100Show/hide
Query:  MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFEIDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKR
        MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFEIDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKR
Subjt:  MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFEIDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKR

Query:  MMLGMANGMGFLPVQMVLEEGSLLMKAVERETGVMAT
        MMLGMANGMGFLPVQMVLEEGSLLMKAVERETGVMAT
Subjt:  MMLGMANGMGFLPVQMVLEEGSLLMKAVERETGVMAT

A0A6J1I262 uncharacterized protein LOC1114683431.1e-6495.62Show/hide
Query:  MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFEIDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKR
        MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEML ELQSLRVTQNDFEIDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEF+TETKR
Subjt:  MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFEIDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKR

Query:  MMLGMANGMGFLPVQMVLEEGSLLMKAVERETGVMAT
        MMLGMANGMGFLPVQM+LEEGS LMKAVE ET VMAT
Subjt:  MMLGMANGMGFLPVQMVLEEGSLLMKAVERETGVMAT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54530.1 Calcium-binding EF hand family protein7.3e-1029.69Show/hide
Query:  ILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFEIDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKRMMLG
        ++ S+T++ F+ D  +F +   + F  LD + +G+LS SE+ + L ++   +++         DE  +VY+A+F +F  DL        F+     ++  
Subjt:  ILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFEIDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKRMMLG

Query:  MANGMGFLPVQMVLEEGSLLMKAVERET
        MA G+G  PV MV+    L+MKAV  E+
Subjt:  MANGMGFLPVQMVLEEGSLLMKAVERET

AT2G44310.1 Calcium-binding EF-hand family protein8.1e-2540.6Show/hide
Query:  MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFEIDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKR
        M V ++D  T+ +FV+DE  F   + ERFA LD N DG+LS SE+ +  +S+R+ ++ F +DV    DE++++Y ++F +FD D +G+VDL+EF++E K+
Subjt:  MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFEIDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKR

Query:  MMLGMANGMGFLPVQMVL--EEGSLLMKAVERE
        ++L +A+G+G  P+ MVL  ++ + L KA + E
Subjt:  MMLGMANGMGFLPVQMVL--EEGSLLMKAVERE

AT4G38810.2 Calcium-binding EF-hand family protein5.8e-0728Show/hide
Query:  EILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFEIDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKRMML
        ++LD   IV  VE+E  F  F+ ++F  LD + DG LS +E+   +  +             D D    +YS +  +F       V   EFK     ++L
Subjt:  EILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFEIDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKRMML

Query:  GMANGMGFLPVQMVLEEGSLLMKAV
        GMA G+   P+ ++  +G  L + V
Subjt:  GMANGMGFLPVQMVLEEGSLLMKAV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGTGGAAATATTGGACAGTGAAACCATCGTCAACTTTGTTGAAGACGAGGCAGCCTTTGGTGCCTTCATTAGAGAACGCTTTGCTCACCTTGACACCAACCATGA
TGGCCTCCTTTCTTATAGCGAGATGCTAGAGGAGTTGCAGAGCCTGAGGGTGACACAGAACGACTTTGAAATTGACGTGAAGCTTGACCCAGATGAGGTTTCTTCTGTTT
ATAGTGCTCTGTTCTTGCAGTTTGATCGTGACTTGAATGGGACAGTTGATCTGGATGAGTTCAAGACTGAGACCAAAAGGATGATGCTTGGGATGGCTAATGGGATGGGG
TTCTTGCCTGTTCAGATGGTGCTGGAAGAGGGCAGCTTGTTGATGAAGGCTGTTGAGCGTGAAACTGGTGTAATGGCCACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGTGGAAATATTGGACAGTGAAACCATCGTCAACTTTGTTGAAGACGAGGCAGCCTTTGGTGCCTTCATTAGAGAACGCTTTGCTCACCTTGACACCAACCATGA
TGGCCTCCTTTCTTATAGCGAGATGCTAGAGGAGTTGCAGAGCCTGAGGGTGACACAGAACGACTTTGAAATTGACGTGAAGCTTGACCCAGATGAGGTTTCTTCTGTTT
ATAGTGCTCTGTTCTTGCAGTTTGATCGTGACTTGAATGGGACAGTTGATCTGGATGAGTTCAAGACTGAGACCAAAAGGATGATGCTTGGGATGGCTAATGGGATGGGG
TTCTTGCCTGTTCAGATGGTGCTGGAAGAGGGCAGCTTGTTGATGAAGGCTGTTGAGCGTGAAACTGGTGTAATGGCCACTTGA
Protein sequenceShow/hide protein sequence
MSVEILDSETIVNFVEDEAAFGAFIRERFAHLDTNHDGLLSYSEMLEELQSLRVTQNDFEIDVKLDPDEVSSVYSALFLQFDRDLNGTVDLDEFKTETKRMMLGMANGMG
FLPVQMVLEEGSLLMKAVERETGVMAT