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Carg04173 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04173
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1
Genome locationCarg_Chr19:8037151..8039440
RNA-Seq ExpressionCarg04173
SyntenyCarg04173
Gene Ontology termsGO:0000741 - karyogamy (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR033251 - Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial
IPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572259.1 Protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]3.4e-40100Show/hide
Query:  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEISCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS
        MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEISCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS
Subjt:  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEISCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS
XP_022952574.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita moschata]7.5e-4098.95Show/hide
Query:  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEISCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS
        MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVE+SCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS
Subjt:  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEISCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS
XP_022952575.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Cucurbita moschata]1.3e-3698.88Show/hide
Query:  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEISCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEV
        MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVE+SCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEV
Subjt:  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEISCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEV
XP_022969309.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita maxima]7.1e-3895.79Show/hide
Query:  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEISCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS
        MASFAARAISRSSFG+AATLLSVGSRAAPARSSFRIA+KRPFSQCAVRLPVE+S CVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS
Subjt:  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEISCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS
XP_023554650.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita pepo subsp. pepo]1.3e-3693.68Show/hide
Query:  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEISCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS
        MASFAARAISRSSFGKAATLLSVG+RAAPARS FRIA+KRP SQCAVRLPVE+S CVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS
Subjt:  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEISCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS
TrEMBL top hitse value%identityAlignment
A0A1S3CB40 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X19.0e-3182.11Show/hide
Query:  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEISCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS
        MASFAARAI RSS GK ATLLS G+RAAPARS FRIA+KRPFS  + R+P+E+S CVESMLPFHSATSSALMTSMLSVS HSYGWLSEV+GLQTS
Subjt:  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEISCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS
A0A6J1GM36 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X13.6e-4098.95Show/hide
Query:  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEISCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS
        MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVE+SCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS
Subjt:  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEISCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS
A0A6J1GM60 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X26.4e-3798.88Show/hide
Query:  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEISCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEV
        MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVE+SCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEV
Subjt:  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEISCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEV
A0A6J1HZK6 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X26.0e-3595.51Show/hide
Query:  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEISCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEV
        MASFAARAISRSSFG+AATLLSVGSRAAPARSSFRIA+KRPFSQCAVRLPVE+S CVESMLPFHSATSSALMTSMLSVSRHSYGWLSEV
Subjt:  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEISCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEV
A0A6J1I278 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X13.4e-3895.79Show/hide
Query:  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEISCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS
        MASFAARAISRSSFG+AATLLSVGSRAAPARSSFRIA+KRPFSQCAVRLPVE+S CVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS
Subjt:  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEISCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS
SwissProt top hitse value%identityAlignment
Q93ZJ3 Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial2.2e-1048.84Show/hide
Query:  ARAISRSSFGKAATLLSVGSRAAPARSS---FRIAAKRPFSQCAVRLPVEISCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE
        AR++ R++  ++A   S G  A+ A+S+   FR  A+R      +R PVE+S CVES+LP+HSAT+SALMTS LS+S  +YGWLS+
Subjt:  ARAISRSSFGKAATLLSVGSRAAPARSS---FRIAAKRPFSQCAVRLPVEISCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE
Arabidopsis top hitse value%identityAlignment
AT1G28395.1 unknown protein7.1e-1247.13Show/hide
Query:  AARAISRSSFGKAATL---LSVGSRAAP--ARSSFRIAAKRPFSQCAVRLPVEISCCVESMLPFHSATSSALMTSMLSVSRHSYGWL
        AAR++ RS+  +A++     S G +  P  AR++FR+  + P +    R PVE+SCCVE+MLP+H+AT+SAL+ SMLSVSR   GW+
Subjt:  AARAISRSSFGKAATL---LSVGSRAAP--ARSSFRIAAKRPFSQCAVRLPVEISCCVESMLPFHSATSSALMTSMLSVSRHSYGWL
AT1G28395.2 unknown protein7.1e-1247.13Show/hide
Query:  AARAISRSSFGKAATL---LSVGSRAAP--ARSSFRIAAKRPFSQCAVRLPVEISCCVESMLPFHSATSSALMTSMLSVSRHSYGWL
        AAR++ RS+  +A++     S G +  P  AR++FR+  + P +    R PVE+SCCVE+MLP+H+AT+SAL+ SMLSVSR   GW+
Subjt:  AARAISRSSFGKAATL---LSVGSRAAP--ARSSFRIAAKRPFSQCAVRLPVEISCCVESMLPFHSATSSALMTSMLSVSRHSYGWL
AT1G28395.3 unknown protein7.1e-1247.13Show/hide
Query:  AARAISRSSFGKAATL---LSVGSRAAP--ARSSFRIAAKRPFSQCAVRLPVEISCCVESMLPFHSATSSALMTSMLSVSRHSYGWL
        AAR++ RS+  +A++     S G +  P  AR++FR+  + P +    R PVE+SCCVE+MLP+H+AT+SAL+ SMLSVSR   GW+
Subjt:  AARAISRSSFGKAATL---LSVGSRAAP--ARSSFRIAAKRPFSQCAVRLPVEISCCVESMLPFHSATSSALMTSMLSVSRHSYGWL
AT2G33847.1 unknown protein1.9e-1252.5Show/hide
Query:  AARAISRSSFGKA--ATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEISCCVESMLPFHSATSSALMTSMLSVSRHS
        AAR++ RS  G+A  A L S     + ARSSF++  + P S    R PVE+SCCVE+MLP+H+AT+SAL+ SMLSVS  S
Subjt:  AARAISRSSFGKA--ATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEISCCVESMLPFHSATSSALMTSMLSVSRHS
AT2G33847.2 unknown protein1.9e-1252.5Show/hide
Query:  AARAISRSSFGKA--ATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEISCCVESMLPFHSATSSALMTSMLSVSRHS
        AAR++ RS  G+A  A L S     + ARSSF++  + P S    R PVE+SCCVE+MLP+H+AT+SAL+ SMLSVS  S
Subjt:  AARAISRSSFGKA--ATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEISCCVESMLPFHSATSSALMTSMLSVSRHS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCTTTGCCGCCAGGGCCATTTCCCGATCCTCCTTCGGCAAGGCTGCGACTCTTCTGAGCGTCGGATCCAGAGCAGCTCCGGCTCGTTCATCATTTCGCATTGC
TGCTAAACGACCTTTCTCTCAGTGTGCTGTAAGGCTTCCAGTTGAAATTAGCTGCTGTGTGGAGTCCATGCTTCCCTTCCATTCTGCTACTTCTTCGGCATTAATGACTT
CGATGCTTTCTGTCTCTCGCCATAGTTATGGTTGGCTTTCAGAAGTGACTGGCTTGCAAACTTCATGA
mRNA sequenceShow/hide mRNA sequence
GAAGCAGGGTTTAGCATTTGAATGCCCTAAATCTGAGACGGAACTCTGTTTATCGTGGCTGACTGCACATAATTTTTCGCCGCGCTCTCAGATTTAACGATGGCTTCCTT
TGCCGCCAGGGCCATTTCCCGATCCTCCTTCGGCAAGGCTGCGACTCTTCTGAGCGTCGGATCCAGAGCAGCTCCGGCTCGTTCATCATTTCGCATTGCTGCTAAACGAC
CTTTCTCTCAGTGTGCTGTAAGGCTTCCAGTTGAAATTAGCTGCTGTGTGGAGTCCATGCTTCCCTTCCATTCTGCTACTTCTTCGGCATTAATGACTTCGATGCTTTCT
GTCTCTCGCCATAGTTATGGTTGGCTTTCAGAAGTGACTGGCTTGCAAACTTCATGATAGACGTTGATTGGAAAAGGTTTCACCTTCTTGGGCAACATGGTCACCCAAGT
AAATCTTCGATTGCAACCAGGGTTTGTGTTTGGCAAGGCAATCTCATCTTTTAAATTTAGTTTTCTCAGCTTAATCTTGATATTCAACTGAAAGACCCAAATAACAACCT
TTTTCTTATGATATATTTTATTTAGGTTCAGATATGATTTTGGTCTTTGTATCTTTCGTTTCATTAGAAACTAATACCAAGAACTATGTGCAATTTACCCATTATGATGA
GTCGAGCAAATCTGCTAGAGCACATTGATATAGTACACCCATGAATGCAAGGGTTATAATGTACGTTTGAGTAAGCCTTTTGTGAGGCAACTGACTGAAAGTTAGCTGTG
GATAGCACAATAGTTAGACAAATGAGGCAACA
Protein sequenceShow/hide protein sequence
MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEISCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLQTS