CuGenDBv2

Gene ID	Carg04179
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	translation initiation factor IF-2 isoform X1
Genome location	Carg_Chr19:8091709..8093755
RNA-Seq Expression	Carg04179
Synteny	Carg04179
Gene Ontology terms	GO:0006413 - translational initiation (biological process) GO:0016310 - phosphorylation (biological process) GO:0003743 - translation initiation factor activity (molecular function) GO:0016301 - kinase activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7011894.1 hypothetical protein SDJN02_26801, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.8e-119

100

Show/hide

Query:  MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSSSFASATYSSISSANKSHGRMLVLTRPTPKPISSPPVLSPQPQSRSPSADPRPVADQ
        MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSSSFASATYSSISSANKSHGRMLVLTRPTPKPISSPPVLSPQPQSRSPSADPRPVADQ
Subjt:  MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSSSFASATYSSISSANKSHGRMLVLTRPTPKPISSPPVLSPQPQSRSPSADPRPVADQ

Query:  TRPQCESDSISLRPLGRTGTGAIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVSVGIRSREANQRQYGNYGSPGRYGEDGRPKSGG
        TRPQCESDSISLRPLGRTGTGAIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVSVGIRSREANQRQYGNYGSPGRYGEDGRPKSGG
Subjt:  TRPQCESDSISLRPLGRTGTGAIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVSVGIRSREANQRQYGNYGSPGRYGEDGRPKSGG

Query:  AYERMNGAGEADQGAMVNRPRSSGNRPNSSGCL
        AYERMNGAGEADQGAMVNRPRSSGNRPNSSGCL
Subjt:  AYERMNGAGEADQGAMVNRPRSSGNRPNSSGCL

XP_022952341.1 uncharacterized protein LOC111455051 isoform X1 [Cucurbita moschata]

6.4e-117

99.14

Show/hide

Query:  MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSSSFASATYSSISSANKSHGRMLVLTRPTPKPISSPPVLSPQPQSRSPSADPRPVADQ
        MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNP  SSSSSSSSSFASATYSSISSANKSHGRMLVLTRPTPKPISSPPVLSPQPQSRSPSADPRPVADQ
Subjt:  MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSSSFASATYSSISSANKSHGRMLVLTRPTPKPISSPPVLSPQPQSRSPSADPRPVADQ

Query:  TRPQCESDSISLRPLGRTGTGAIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVSVGIRSREANQRQYGNYGSPGRYGEDGRPKSGG
        TRPQCESDSISLRPLGRTGTGAIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVSVGIRSREANQRQYGNYGSPGRYGEDGRPKSGG
Subjt:  TRPQCESDSISLRPLGRTGTGAIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVSVGIRSREANQRQYGNYGSPGRYGEDGRPKSGG

Query:  AYERMNGAGEADQGAMVNRPRSSGNRPNSSGC
        AYERMNGAGEADQGAMVNRPRSSGNRPNSSGC
Subjt:  AYERMNGAGEADQGAMVNRPRSSGNRPNSSGC

XP_022952342.1 uncharacterized protein LOC111455051 isoform X2 [Cucurbita moschata]

9.3e-116

99.13

Show/hide

Query:  MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSSSFASATYSSISSANKSHGRMLVLTRPTPKPISSPPVLSPQPQSRSPSADPRPVADQ
        MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNP  SSSSSSSSSFASATYSSISSANKSHGRMLVLTRPTPKPISSPPVLSPQPQSRSPSADPRPVADQ
Subjt:  MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSSSFASATYSSISSANKSHGRMLVLTRPTPKPISSPPVLSPQPQSRSPSADPRPVADQ

Query:  TRPQCESDSISLRPLGRTGTGAIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVSVGIRSREANQRQYGNYGSPGRYGEDGRPKSGG
        TRPQCESDSISLRPLGRTGTGAIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVSVGIRSREANQRQYGNYGSPGRYGEDGRPKSGG
Subjt:  TRPQCESDSISLRPLGRTGTGAIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVSVGIRSREANQRQYGNYGSPGRYGEDGRPKSGG

Query:  AYERMNGAGEADQGAMVNRPRSSGNRPNSSG
        AYERMNGAGEADQGAMVNRPRSSGNRPNSSG
Subjt:  AYERMNGAGEADQGAMVNRPRSSGNRPNSSG

XP_022969241.1 uncharacterized protein LOC111468300 isoform X1 [Cucurbita maxima]

1.5e-113

97.41

Show/hide

Query:  MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSSSFASATYSSISSANKSHGRMLVLTRPTPKPISSPPVLSPQPQSRSPSADPRPVADQ
        MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNP SSSSSSSSSSFASATYSSISSANKSHGRMLVLTRPTPKPISS PVLSPQPQSRSPSADPRPVADQ
Subjt:  MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSSSFASATYSSISSANKSHGRMLVLTRPTPKPISSPPVLSPQPQSRSPSADPRPVADQ

Query:  TRPQCESDSISLRPLGRTGTGAIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVSVGIRSREANQRQYGNYGSPGRYGEDGRPKSGG
        T PQCESDSISLRPLGRTGTGAIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPV+VGIRSREANQRQYGNYGSPGRYGEDGRPKSGG
Subjt:  TRPQCESDSISLRPLGRTGTGAIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVSVGIRSREANQRQYGNYGSPGRYGEDGRPKSGG

Query:  AYERMNGAGEADQGAMVNRPRSSGNRPNSSGC
        A ERMNGAGEADQG MVNRPRSSGNRPNSSGC
Subjt:  AYERMNGAGEADQGAMVNRPRSSGNRPNSSGC

XP_023554573.1 uncharacterized protein LOC111811777 isoform X2 [Cucurbita pepo subsp. pepo]

1.3e-114

97.41

Show/hide

Query:  MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSSSFASATYSSISSANKSHGRMLVLTRPTPKPISSPPVLSPQPQSRSPSADPRPVADQ
        MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNP  SSSSSSSSSFASATYSSISSANKSHGRMLVLTRPTPKPISSPPVLSPQPQSRSPSADPRPVADQ
Subjt:  MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSSSFASATYSSISSANKSHGRMLVLTRPTPKPISSPPVLSPQPQSRSPSADPRPVADQ

Query:  TRPQCESDSISLRPLGRTGTGAIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVSVGIRSREANQRQYGNYGSPGRYGEDGRPKSGG
        TRPQCESDSISLRPLGRTGTGAIAPSPIPNLEKDKEIPPPTVTLHK EKFVPPHLRAGFVGKEERPV+VGIRSREANQRQYGNYGSPGRYGEDGRPKSGG
Subjt:  TRPQCESDSISLRPLGRTGTGAIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVSVGIRSREANQRQYGNYGSPGRYGEDGRPKSGG

Query:  AYERMNGAGEADQGAMVNRPRSSGNRPNSSGC
        AYER+NGAGEADQGAMVNRPRSSGN PNSSGC
Subjt:  AYERMNGAGEADQGAMVNRPRSSGNRPNSSGC

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C160 translation initiation factor IF-2 isoform X1

1.3e-94

84.85

Show/hide

Query:  MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSSSFASATYSSISSANKSHGRMLVLTRPTPKPISSPPVLSPQPQSRSPSADPRPVADQ
        MAKTNKYTSIN+NHIYDK+LS NSKTGNNPS N   + SSSSSSSFA+ATYSSISS NKSHGRMLVLTRPTPKPI+SP VLSPQPQSR  SAD RPV DQ
Subjt:  MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSSSFASATYSSISSANKSHGRMLVLTRPTPKPISSPPVLSPQPQSRSPSADPRPVADQ

Query:  TRPQCESDSISLRPLGRTGTGAIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVSVGIRSREANQRQYGNYGSPGRYGEDGRPKSGG
         RPQ +SDSISLRPLGRTGTGAIAPSPI  LEK++EI PP VTLHKPEKFVPPHLRAGFVGKEERPV+VGIRSRE NQRQYGNYGS  RYGEDGRPKSGG
Subjt:  TRPQCESDSISLRPLGRTGTGAIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVSVGIRSREANQRQYGNYGSPGRYGEDGRPKSGG

Query:  AYERMNGAGEADQGAMVNRPRSSGNRPNSSG
         YERM G GEAD GAMVNRPRSSGNRP+SSG
Subjt:  AYERMNGAGEADQGAMVNRPRSSGNRPNSSG

A0A6J1GJZ3 uncharacterized protein LOC111455051 isoform X1

3.1e-117

99.14

Show/hide

Query:  MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSSSFASATYSSISSANKSHGRMLVLTRPTPKPISSPPVLSPQPQSRSPSADPRPVADQ
        MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNP  SSSSSSSSSFASATYSSISSANKSHGRMLVLTRPTPKPISSPPVLSPQPQSRSPSADPRPVADQ
Subjt:  MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSSSFASATYSSISSANKSHGRMLVLTRPTPKPISSPPVLSPQPQSRSPSADPRPVADQ

Query:  TRPQCESDSISLRPLGRTGTGAIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVSVGIRSREANQRQYGNYGSPGRYGEDGRPKSGG
        TRPQCESDSISLRPLGRTGTGAIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVSVGIRSREANQRQYGNYGSPGRYGEDGRPKSGG
Subjt:  TRPQCESDSISLRPLGRTGTGAIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVSVGIRSREANQRQYGNYGSPGRYGEDGRPKSGG

Query:  AYERMNGAGEADQGAMVNRPRSSGNRPNSSGC
        AYERMNGAGEADQGAMVNRPRSSGNRPNSSGC
Subjt:  AYERMNGAGEADQGAMVNRPRSSGNRPNSSGC

A0A6J1GK55 uncharacterized protein LOC111455051 isoform X2

4.5e-116

99.13

Show/hide

Query:  MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSSSFASATYSSISSANKSHGRMLVLTRPTPKPISSPPVLSPQPQSRSPSADPRPVADQ
        MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNP  SSSSSSSSSFASATYSSISSANKSHGRMLVLTRPTPKPISSPPVLSPQPQSRSPSADPRPVADQ
Subjt:  MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSSSFASATYSSISSANKSHGRMLVLTRPTPKPISSPPVLSPQPQSRSPSADPRPVADQ

Query:  TRPQCESDSISLRPLGRTGTGAIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVSVGIRSREANQRQYGNYGSPGRYGEDGRPKSGG
        TRPQCESDSISLRPLGRTGTGAIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVSVGIRSREANQRQYGNYGSPGRYGEDGRPKSGG
Subjt:  TRPQCESDSISLRPLGRTGTGAIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVSVGIRSREANQRQYGNYGSPGRYGEDGRPKSGG

Query:  AYERMNGAGEADQGAMVNRPRSSGNRPNSSG
        AYERMNGAGEADQGAMVNRPRSSGNRPNSSG
Subjt:  AYERMNGAGEADQGAMVNRPRSSGNRPNSSG

A0A6J1HX94 uncharacterized protein LOC111468300 isoform X1

7.2e-114

97.41

Show/hide

Query:  MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSSSFASATYSSISSANKSHGRMLVLTRPTPKPISSPPVLSPQPQSRSPSADPRPVADQ
        MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNP SSSSSSSSSSFASATYSSISSANKSHGRMLVLTRPTPKPISS PVLSPQPQSRSPSADPRPVADQ
Subjt:  MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSSSFASATYSSISSANKSHGRMLVLTRPTPKPISSPPVLSPQPQSRSPSADPRPVADQ

Query:  TRPQCESDSISLRPLGRTGTGAIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVSVGIRSREANQRQYGNYGSPGRYGEDGRPKSGG
        T PQCESDSISLRPLGRTGTGAIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPV+VGIRSREANQRQYGNYGSPGRYGEDGRPKSGG
Subjt:  TRPQCESDSISLRPLGRTGTGAIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVSVGIRSREANQRQYGNYGSPGRYGEDGRPKSGG

Query:  AYERMNGAGEADQGAMVNRPRSSGNRPNSSGC
        A ERMNGAGEADQG MVNRPRSSGNRPNSSGC
Subjt:  AYERMNGAGEADQGAMVNRPRSSGNRPNSSGC

A0A6J1I0F0 uncharacterized protein LOC111468300 isoform X2

7.9e-113

97.4

Show/hide

Query:  MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSSSFASATYSSISSANKSHGRMLVLTRPTPKPISSPPVLSPQPQSRSPSADPRPVADQ
        MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNP SSSSSSSSSSFASATYSSISSANKSHGRMLVLTRPTPKPISS PVLSPQPQSRSPSADPRPVADQ
Subjt:  MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSSSFASATYSSISSANKSHGRMLVLTRPTPKPISSPPVLSPQPQSRSPSADPRPVADQ

Query:  TRPQCESDSISLRPLGRTGTGAIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVSVGIRSREANQRQYGNYGSPGRYGEDGRPKSGG
        T PQCESDSISLRPLGRTGTGAIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPV+VGIRSREANQRQYGNYGSPGRYGEDGRPKSGG
Subjt:  TRPQCESDSISLRPLGRTGTGAIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVSVGIRSREANQRQYGNYGSPGRYGEDGRPKSGG

Query:  AYERMNGAGEADQGAMVNRPRSSGNRPNSSG
        A ERMNGAGEADQG MVNRPRSSGNRPNSSG
Subjt:  AYERMNGAGEADQGAMVNRPRSSGNRPNSSG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G54680.1 proteophosphoglycan-related

1.8e-24

Show/hide

Query:  NKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSSSFASATYSSISSANKSHGRMLVLTRPTPKPISSPPVLSPQPQSRSP-SADPRPVADQTRP
        NKYTSIN+NHI  KD              P SSSSSSSS+S+        SS  +S+GRMLVLT+ +PKP+ SP        +  P S  PR  ++Q   
Subjt:  NKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSSSFASATYSSISSANKSHGRMLVLTRPTPKPISSPPVLSPQPQSRSP-SADPRPVADQTRP

Query:  QCESDSISLRPLGRTGTGAIAPSPI--PNLEKDKEI--PPPTVTLHKPEKFVPPHLRAGFVGKEERPVSVGIRSREAN---QRQYGNYGSPGR----YGE
          +   ISLRPLG TG+ +    PI  P + K  E+  P P     KP++FVPPHLR GFV K+E+P     R R+ N    ++  N   P +    YG+
Subjt:  QCESDSISLRPLGRTGTGAIAPSPI--PNLEKDKEI--PPPTVTLHKPEKFVPPHLRAGFVGKEERPVSVGIRSREAN---QRQYGNYGSPGR----YGE

Query:  DGRPKSGGAYERMNGAGEADQGAMVNRPRSSGNRPNSSG
         GRPKSGG YER+              PR +GNRP +SG
Subjt:  DGRPKSGGAYERMNGAGEADQGAMVNRPRSSGNRPNSSG

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCAAAAACCAACAAATACACCTCCATCAATTACAATCACATCTACGACAAGGATCTCTCCCCCAATTCCAAAACTGGCAACAATCCCTCCAAAAACCCATCATCTTC
TTCTTCTTCTTCTTCCTCCTCCTCTTTCGCTTCTGCAACTTATTCTTCCATTTCTTCCGCTAACAAGTCCCATGGCCGCATGCTCGTCCTGACCCGTCCCACTCCCAAAC
CCATCTCTTCGCCGCCGGTCCTGTCCCCTCAGCCTCAATCTCGATCCCCATCTGCCGATCCTCGTCCTGTTGCGGATCAGACCCGTCCGCAATGCGAATCCGATTCGATC
TCGCTTCGCCCTCTCGGTCGGACAGGTACGGGCGCGATCGCGCCGTCTCCGATTCCGAACTTGGAGAAGGACAAGGAGATTCCTCCTCCGACTGTGACGTTGCATAAACC
GGAGAAATTTGTGCCGCCTCACCTCAGGGCGGGCTTCGTCGGGAAGGAGGAGAGACCTGTGAGCGTTGGGATCCGATCTAGGGAGGCGAATCAGAGGCAGTATGGGAATT
ACGGGTCTCCGGGTCGGTACGGTGAAGATGGGCGGCCGAAATCCGGCGGTGCATATGAGAGAATGAACGGGGCGGGAGAGGCAGATCAGGGGGCGATGGTGAATCGACCA
AGATCCAGTGGGAATCGCCCGAATTCTAGTGGATGTTTGTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MAKTNKYTSINYNHIYDKDLSPNSKTGNNPSKNPSSSSSSSSSSSFASATYSSISSANKSHGRMLVLTRPTPKPISSPPVLSPQPQSRSPSADPRPVADQTRPQCESDSI
SLRPLGRTGTGAIAPSPIPNLEKDKEIPPPTVTLHKPEKFVPPHLRAGFVGKEERPVSVGIRSREANQRQYGNYGSPGRYGEDGRPKSGGAYERMNGAGEADQGAMVNRP
RSSGNRPNSSGCL

Carg04179 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome