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Carg04199 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04199
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTransmembrane protein
Genome locationCarg_Chr01:792543..796646
RNA-Seq ExpressionCarg04199
SyntenyCarg04199
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606831.1 hypothetical protein SDJN03_00173, partial [Cucurbita argyrosperma subsp. sororia]2.0e-55100Show/hide
Query:  MDDDEDPWFAPDKLYHFLLCFTLTVFFAALATLTRYPFIRRHSIMIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADLVGVLIASFFLHALRFSIRR
        MDDDEDPWFAPDKLYHFLLCFTLTVFFAALATLTRYPFIRRHSIMIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADLVGVLIASFFLHALRFSIRR
Subjt:  MDDDEDPWFAPDKLYHFLLCFTLTVFFAALATLTRYPFIRRHSIMIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADLVGVLIASFFLHALRFSIRR

Query:  GGGKEASPNRDILM
        GGGKEASPNRDILM
Subjt:  GGGKEASPNRDILM
KAG7036537.1 hypothetical protein SDJN02_00156, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-100100Show/hide
Query:  MDDDEDPWFAPDKLYHFLLCFTLTVFFAALATLTRYPFIRRHSIMIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADLVGVLIASFFLHALRFSIRR
        MDDDEDPWFAPDKLYHFLLCFTLTVFFAALATLTRYPFIRRHSIMIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADLVGVLIASFFLHALRFSIRR
Subjt:  MDDDEDPWFAPDKLYHFLLCFTLTVFFAALATLTRYPFIRRHSIMIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADLVGVLIASFFLHALRFSIRR

Query:  GGGKEASPNRDILMVDQARELSSSSKASCSGRQACIAILIPAPHNVPSMGAVRRKEKRRGTYSPSIGGNGGNDKHEVEANDKLKSKSLRIST
        GGGKEASPNRDILMVDQARELSSSSKASCSGRQACIAILIPAPHNVPSMGAVRRKEKRRGTYSPSIGGNGGNDKHEVEANDKLKSKSLRIST
Subjt:  GGGKEASPNRDILMVDQARELSSSSKASCSGRQACIAILIPAPHNVPSMGAVRRKEKRRGTYSPSIGGNGGNDKHEVEANDKLKSKSLRIST
XP_022948457.1 uncharacterized protein LOC111452136 [Cucurbita moschata]6.8e-56100Show/hide
Query:  MDDDEDPWFAPDKLYHFLLCFTLTVFFAALATLTRYPFIRRHSIMIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADLVGVLIASFFLHALRFSIRR
        MDDDEDPWFAPDKLYHFLLCFTLTVFFAALATLTRYPFIRRHSIMIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADLVGVLIASFFLHALRFSIRR
Subjt:  MDDDEDPWFAPDKLYHFLLCFTLTVFFAALATLTRYPFIRRHSIMIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADLVGVLIASFFLHALRFSIRR

Query:  GGGKEASPNRDILMV
        GGGKEASPNRDILMV
Subjt:  GGGKEASPNRDILMV
XP_022997696.1 uncharacterized protein LOC111492582 [Cucurbita maxima]1.7e-5497.39Show/hide
Query:  MDDDEDPWFAPDKLYHFLLCFTLTVFFAALATLTRYPFIRRHSIMIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADLVGVLIASFFLHALRFSIRR
        MDDDEDPWFAPDKLYHFLLCFTLTVFFAALATLTR+PFIRRHSIMIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADL+GVLIASFFLHALRF IRR
Subjt:  MDDDEDPWFAPDKLYHFLLCFTLTVFFAALATLTRYPFIRRHSIMIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADLVGVLIASFFLHALRFSIRR

Query:  GGGKEASPNRDILMV
        GGGKEASPNRDILMV
Subjt:  GGGKEASPNRDILMV
XP_038890690.1 uncharacterized protein LOC120080188 [Benincasa hispida]7.5e-4784.35Show/hide
Query:  MDDDEDPWFAPDKLYHFLLCFTLTVFFAALATLTRYPFIRRHSIMIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADLVGVLIASFFLHALRFSIRR
        M+DD+DPW APDKLYHFLLCFTLT+ FA+LA  TRYPFIRRHSI+IGSV+SLFAGAAKEVADELGFFKSAGASTRDA+ADL+GVLIASF LH LRFSIR 
Subjt:  MDDDEDPWFAPDKLYHFLLCFTLTVFFAALATLTRYPFIRRHSIMIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADLVGVLIASFFLHALRFSIRR

Query:  GGGKEASPNRDILMV
         G KEASP+RDILMV
Subjt:  GGGKEASPNRDILMV
TrEMBL top hitse value%identityAlignment
A0A0A0KYM1 Uncharacterized protein1.2e-4582.2Show/hide
Query:  MDDDEDPWFAPDKLYHFLLCFTLTVFFAALATLTRYPFIRRHSIMIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADLVGVLIASFFLHALRFSIRR
        M++D+DPW APDK YHFLLCF+LT+ FA+ A  TRYPFIRRHSI+IGSVLSLFAGAAKEVADELGFFKSAGASTRDAVAD +GVLIASF LHALRFSIR 
Subjt:  MDDDEDPWFAPDKLYHFLLCFTLTVFFAALATLTRYPFIRRHSIMIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADLVGVLIASFFLHALRFSIRR

Query:  ---GGGKEASPNRDILMV
           GGGKEA PNRDILMV
Subjt:  ---GGGKEASPNRDILMV
A0A1S3BXG6 uncharacterized protein LOC1034946505.8e-4582.76Show/hide
Query:  MDDDEDPWFAPDKLYHFLLCFTLTVFFAALATLTRYPFIRRHSIMIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADLVGVLIASFFLHALRFSIRR
        M++D+DPW APDKLYHFLLCF+LT+ FA+ A  TRYPFIRRHSI+IGSVLSL AGAAKEVADELGFFKSAGASTRDAVADL+GVL+ASF LHALRFSIR 
Subjt:  MDDDEDPWFAPDKLYHFLLCFTLTVFFAALATLTRYPFIRRHSIMIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADLVGVLIASFFLHALRFSIRR

Query:  GGG-KEASPNRDILMV
         GG KEA PNRDILMV
Subjt:  GGG-KEASPNRDILMV
A0A5A7TRK6 Putative transmembrane protein5.8e-4582.76Show/hide
Query:  MDDDEDPWFAPDKLYHFLLCFTLTVFFAALATLTRYPFIRRHSIMIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADLVGVLIASFFLHALRFSIRR
        M++D+DPW APDKLYHFLLCF+LT+ FA+ A  TRYPFIRRHSI+IGSVLSL AGAAKEVADELGFFKSAGASTRDAVADL+GVL+ASF LHALRFSIR 
Subjt:  MDDDEDPWFAPDKLYHFLLCFTLTVFFAALATLTRYPFIRRHSIMIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADLVGVLIASFFLHALRFSIRR

Query:  GGG-KEASPNRDILMV
         GG KEA PNRDILMV
Subjt:  GGG-KEASPNRDILMV
A0A6J1G9C8 uncharacterized protein LOC1114521363.3e-56100Show/hide
Query:  MDDDEDPWFAPDKLYHFLLCFTLTVFFAALATLTRYPFIRRHSIMIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADLVGVLIASFFLHALRFSIRR
        MDDDEDPWFAPDKLYHFLLCFTLTVFFAALATLTRYPFIRRHSIMIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADLVGVLIASFFLHALRFSIRR
Subjt:  MDDDEDPWFAPDKLYHFLLCFTLTVFFAALATLTRYPFIRRHSIMIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADLVGVLIASFFLHALRFSIRR

Query:  GGGKEASPNRDILMV
        GGGKEASPNRDILMV
Subjt:  GGGKEASPNRDILMV
A0A6J1K872 uncharacterized protein LOC1114925828.1e-5597.39Show/hide
Query:  MDDDEDPWFAPDKLYHFLLCFTLTVFFAALATLTRYPFIRRHSIMIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADLVGVLIASFFLHALRFSIRR
        MDDDEDPWFAPDKLYHFLLCFTLTVFFAALATLTR+PFIRRHSIMIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADL+GVLIASFFLHALRF IRR
Subjt:  MDDDEDPWFAPDKLYHFLLCFTLTVFFAALATLTRYPFIRRHSIMIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADLVGVLIASFFLHALRFSIRR

Query:  GGGKEASPNRDILMV
        GGGKEASPNRDILMV
Subjt:  GGGKEASPNRDILMV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G15900.1 unknown protein3.5e-2661.8Show/hide
Query:  DDEDPWFAPDKLYHFLLCFTLTVFFAALATLTRYPFIRRHSIMIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADLVGVLIASFFL
        D EDPW A DKLYH + CF++++ F+ LA+ +RY F+RRHSI IGS  SL AGAAKE AD++G F SAGAS RDAVAD +GV+IA+  L
Subjt:  DDEDPWFAPDKLYHFLLCFTLTVFFAALATLTRYPFIRRHSIMIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADLVGVLIASFFL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGACGACGAAGATCCATGGTTTGCTCCCGACAAGCTCTACCACTTCCTTCTCTGCTTCACTCTCACCGTCTTCTTCGCTGCATTGGCCACACTGACACGGTATCC
ATTCATCCGCCGCCATTCAATTATGATTGGATCCGTTCTTTCTCTTTTCGCCGGAGCCGCCAAAGAGGTCGCCGACGAACTCGGCTTCTTCAAGTCAGCCGGAGCGTCTA
CCAGGGATGCTGTTGCTGATCTCGTCGGCGTTTTGATCGCTTCTTTTTTTCTTCACGCTCTCAGATTCTCGATCCGCAGGGGTGGCGGCAAAGAAGCTAGCCCTAATCGA
GACATTTTAATGGTAGATCAGGCAAGGGAGCTGTCGTCATCTTCGAAAGCTTCTTGCAGTGGAAGGCAAGCGTGCATCGCCATCTTGATTCCAGCTCCACACAATGTCCC
TAGTATGGGAGCTGTGAGAAGGAAAGAGAAAAGAAGAGGTACTTACAGCCCGAGTATCGGTGGCAACGGCGGTAATGACAAACATGAGGTTGAAGCTAATGATAAACTCA
AGAGCAAAAGCTTGAGAATATCCACATGA
mRNA sequenceShow/hide mRNA sequence
ATGGACGACGACGAAGATCCATGGTTTGCTCCCGACAAGCTCTACCACTTCCTTCTCTGCTTCACTCTCACCGTCTTCTTCGCTGCATTGGCCACACTGACACGGTATCC
ATTCATCCGCCGCCATTCAATTATGATTGGATCCGTTCTTTCTCTTTTCGCCGGAGCCGCCAAAGAGGTCGCCGACGAACTCGGCTTCTTCAAGTCAGCCGGAGCGTCTA
CCAGGGATGCTGTTGCTGATCTCGTCGGCGTTTTGATCGCTTCTTTTTTTCTTCACGCTCTCAGATTCTCGATCCGCAGGGGTGGCGGCAAAGAAGCTAGCCCTAATCGA
GACATTTTAATGGTAGATCAGGCAAGGGAGCTGTCGTCATCTTCGAAAGCTTCTTGCAGTGGAAGGCAAGCGTGCATCGCCATCTTGATTCCAGCTCCACACAATGTCCC
TAGTATGGGAGCTGTGAGAAGGAAAGAGAAAAGAAGAGGTACTTACAGCCCGAGTATCGGTGGCAACGGCGGTAATGACAAACATGAGGTTGAAGCTAATGATAAACTCA
AGAGCAAAAGCTTGAGAATATCCACATGAAGGAACAGTCACTCCTCCACCCATAAAGGGATCAAATATCCATTTCAATGCAAATGACGCACATAGAGAAGCTACTATTTG
AGCTCCAATATACACCGGCACCTGCATAAGGCATATCAGAAAAGCTCAAAAGATTTTAAGCAACGTTTTTGAAGTTAAAATATTGAATGCCATGGAGATCTCATGGCGGC
TACCTGCTTCCATGGAAAGTGCTTTAGTGCAGCGAAAGCAATGGTGATGCCTGGGTTCAGATGGGCTCCGGAGATGTGGCCGGTCGATAAGATGACAACCATCACTGCCA
TGCCTGTGGAGGCTGCTAGGCCAATGAGCGTTTCAGTTCCTTGTATCTTTTGGTTCACGATAGCAGTGGCAGTTCCAGCAAAGATGAGCATCAGAGTGCCAATGAACTCC
GCTCCAACCTATTGATATAGCTTAACTGGTTAAGGGTTACCTTCCTTGCAAGTGAGACTTTAGATAAGCTTCCTTCTTCGGTGCCCCAATCATCAACATTGAAGGAGATG
CAGCTCTTGAGAAGAGACCTTTTACCATTCTCACTTCCATGGTGATTCCCCTTGTGTCCTCCAAACAGTGGGGCTCCAGGCGTCCCCGGCGTCACAGGCGAAGGAACTTC
CTCTGTGTCCATAACTTGAAAGCTTGAGAGAAGAAGAAAGAGTGGGAACAAAGAAAGGTAAACTTTTTTTCAATTTGGTTTTGGGGTTTGTCCCTTTGTCTTTGGAGAGT
GAACTAAGCTGAATGATTGATTATTTATAGAAGAAAATTGGTTGACTTAAGAGAATCCCAAGACAAAAAGAGAGAGAACATAAGTCACTGGCTGTTAATAAATTGGTCCT
CTCTCATCATTCATAGTTTTGATTTTTTATTTGCATCTTCAAAGTTTTTTTGGATTAGTTAAGTTATAATTGAGCTGATATCACAGATTTGATATTTAATAATCATTGTA
CATCTCTCAAATGCCATTATTACATTGTTGCCTTCAATAATATGGATCTTCTATATCACTTGGATATTATTTCCTATGATCTGATCTGAAATCAGGTATAATGATTCGAT
GGAATGCTGTAGTTCTAAACAATCCTTTGGATGATGATTTTTGTTCTTGAGTCTATGAATTTTCATGATTAGATTTGGTTATTTGAATGTTAGAAATTATTAGAAAAGAC
AAACTGTAACGTGTCCAACACTTGTGCACGTTGAATGTATGATTTCATTACACGTTGATATTCAAGGCTATATAGAAAGCAGACATA
Protein sequenceShow/hide protein sequence
MDDDEDPWFAPDKLYHFLLCFTLTVFFAALATLTRYPFIRRHSIMIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADLVGVLIASFFLHALRFSIRRGGGKEASPNR
DILMVDQARELSSSSKASCSGRQACIAILIPAPHNVPSMGAVRRKEKRRGTYSPSIGGNGGNDKHEVEANDKLKSKSLRIST