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Carg04203 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04203
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionSerrate RNA effector molecule-like protein
Genome locationCarg_Chr01:779824..781489
RNA-Seq ExpressionCarg04203
SyntenyCarg04203
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581965.1 hypothetical protein SDJN03_21967, partial [Cucurbita argyrosperma subsp. sororia]3.1e-3245.31Show/hide
Query:  MIRARASWSRFSNR-------SFCSKFHIPTNNNSNNCRINGDSRVESDLRSYNEACKQLNNLNFMISSLNL----PRKRNLGIHFS-----YLSSSSLA
        M RARAS SR S R        FCSK  I TN NSNN  ING ++VESDL SY EA KQL+NL+FM +S  L    P+K+  GI F      ++   SLA
Subjt:  MIRARASWSRFSNR-------SFCSKFHIPTNNNSNNCRINGDSRVESDLRSYNEACKQLNNLNFMISSLNL----PRKRNLGIHFS-----YLSSSSLA

Query:  LF----------------------------------------------NGVKTRLDKLEETIKEIAIESRKQSGSDSIKKNSEKE--VDKTKHGENTNAS
        ++                                                VKTRLDKLEETIKEIA+ESRKQSGS  + KNSEK   VDKTKHG N +  
Subjt:  LF----------------------------------------------NGVKTRLDKLEETIKEIAIESRKQSGSDSIKKNSEKE--VDKTKHGENTNAS

Query:  SMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRKDAKHENHGGGSSLDAKR
                SKSM+ HL G+KIV APV PK RA+  T+ +D+KH+N GG SS D+KR
Subjt:  SMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRKDAKHENHGGGSSLDAKR

XP_004152172.1 uncharacterized protein LOC101207869 [Cucumis sativus]7.1e-3745.53Show/hide
Query:  MIRARASWSRFS-------NRSFCSKFHIPTNNNSNNCRINGDSRVESDLRSYNEACKQLNNLNFMISSLNL----PRKRNLGIHFS-----YLSSSSLA
        M RARASWS FS        RSFCSK HI TN +SNN +INGD++VE DL SYNEA KQL+NL+ M +S  L     +K+  G+ F      ++   SLA
Subjt:  MIRARASWSRFS-------NRSFCSKFHIPTNNNSNNCRINGDSRVESDLRSYNEACKQLNNLNFMISSLNL----PRKRNLGIHFS-----YLSSSSLA

Query:  LF-----------------------------------------------NGVKTRLDKLEETIKEIAIESRKQSGSDSIKKNSEKEVD--KTKHGENTNA
        ++                                                 VKTRLDKLE TIKEIA+ESRKQSG+ +I KNSEK  D  KTKHG N ++
Subjt:  LF-----------------------------------------------NGVKTRLDKLEETIKEIAIESRKQSGSDSIKKNSEKEVD--KTKHGENTNA

Query:  SSMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRKDAKHENHGGGSSLDAKR
                 +KSM+ HL G+KIV APV PKGR +E T+R D+KH NHGGGSS DA+R
Subjt:  SSMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRKDAKHENHGGGSSLDAKR

XP_008454169.1 PREDICTED: uncharacterized protein LOC103494654 [Cucumis melo]5.6e-3444.36Show/hide
Query:  MIRARASWSRFS-------NRSFCSKFHIPTNNNSNNCRINGDSRVESDLRSYNEACKQLNNLNFMISSLNL----PRKRNLGIHFS-----YLSSSSLA
        M RARASWS FS        RSFCSK HI TN +SNN +INGD++V+ DL SY+EA KQL+NL+FM +S  L     +K+  G+ F      ++   SLA
Subjt:  MIRARASWSRFS-------NRSFCSKFHIPTNNNSNNCRINGDSRVESDLRSYNEACKQLNNLNFMISSLNL----PRKRNLGIHFS-----YLSSSSLA

Query:  LF-----------------------------------------------NGVKTRLDKLEETIKEIAIESRKQSGSDSIKKNSEKEVD--KTKHGENTNA
        ++                                                 VKTRLDKLE+TIKEIA+ESRKQSG+ +I KNSEK  D  KTKHG N + 
Subjt:  LF-----------------------------------------------NGVKTRLDKLEETIKEIAIESRKQSGSDSIKKNSEKEVD--KTKHGENTNA

Query:  SSMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRKDAKHENHGGGSSLDAKR
                 +KSM+ HL G+KIV APV PK  A+E T+R+D+KH N G GSSLD KR
Subjt:  SSMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRKDAKHENHGGGSSLDAKR

XP_022956225.1 uncharacterized protein LOC111457985 [Cucurbita moschata]8.1e-3345.7Show/hide
Query:  MIRARASWSRFSNR-------SFCSKFHIPTNNNSNNCRINGDSRVESDLRSYNEACKQLNNLNFMISSLNL----PRKRNLGIHFS-----YLSSSSLA
        M RARAS SRFS R        FCSK  I TN NSNN  ING ++VESDL SY EA KQL+NL+FM +S  L    P+K+  GI F      ++   SLA
Subjt:  MIRARASWSRFSNR-------SFCSKFHIPTNNNSNNCRINGDSRVESDLRSYNEACKQLNNLNFMISSLNL----PRKRNLGIHFS-----YLSSSSLA

Query:  LF----------------------------------------------NGVKTRLDKLEETIKEIAIESRKQSGSDSIKKNSEKE--VDKTKHGENTNAS
        ++                                                VKTRLDKLEETIKEIA+ESRKQSGS  + KNSEK   VDKTKHG N +  
Subjt:  LF----------------------------------------------NGVKTRLDKLEETIKEIAIESRKQSGSDSIKKNSEKE--VDKTKHGENTNAS

Query:  SMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRKDAKHENHGGGSSLDAKR
                SKSM+ HL G+KIV APV PK RA+  T+ +D+KH+N GG SS D+KR
Subjt:  SMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRKDAKHENHGGGSSLDAKR

XP_038901255.1 uncharacterized protein LOC120088201 [Benincasa hispida]2.8e-3345.31Show/hide
Query:  MIRARASWSRFSNR-------SFCSKFHIPTNNNSNNCRINGDSRVESDLRSYNEACKQLNNLNFMISSLNL----PRKRNLGIHFS-----YLSSSSLA
        M+RARASW+RFS R       SFCSK HI  N NS   +INGD++VESDL SYNEA KQL+NL+FM +S  L      K+  GI F      +    SLA
Subjt:  MIRARASWSRFSNR-------SFCSKFHIPTNNNSNNCRINGDSRVESDLRSYNEACKQLNNLNFMISSLNL----PRKRNLGIHFS-----YLSSSSLA

Query:  LF-----------------------------------------------NGVKTRLDKLEETIKEIAIESRKQSGSDSIKKNSEK--EVDKTKHGENTNA
        ++                                                 VK RLDKLEETIKEIA+E RKQSG+  I KNSEK  +VDKTKHG N + 
Subjt:  LF-----------------------------------------------NGVKTRLDKLEETIKEIAIESRKQSGSDSIKKNSEK--EVDKTKHGENTNA

Query:  SSMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRKDAKHENHGGGSSLDAK
                 SKSM+  L G+KIV APV PKGRA+E T+R+D KH+N  GGSS  AK
Subjt:  SSMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRKDAKHENHGGGSSLDAK

TrEMBL top hitse value%identityAlignment
A0A0A0KTR7 Uncharacterized protein3.4e-3745.53Show/hide
Query:  MIRARASWSRFS-------NRSFCSKFHIPTNNNSNNCRINGDSRVESDLRSYNEACKQLNNLNFMISSLNL----PRKRNLGIHFS-----YLSSSSLA
        M RARASWS FS        RSFCSK HI TN +SNN +INGD++VE DL SYNEA KQL+NL+ M +S  L     +K+  G+ F      ++   SLA
Subjt:  MIRARASWSRFS-------NRSFCSKFHIPTNNNSNNCRINGDSRVESDLRSYNEACKQLNNLNFMISSLNL----PRKRNLGIHFS-----YLSSSSLA

Query:  LF-----------------------------------------------NGVKTRLDKLEETIKEIAIESRKQSGSDSIKKNSEKEVD--KTKHGENTNA
        ++                                                 VKTRLDKLE TIKEIA+ESRKQSG+ +I KNSEK  D  KTKHG N ++
Subjt:  LF-----------------------------------------------NGVKTRLDKLEETIKEIAIESRKQSGSDSIKKNSEKEVD--KTKHGENTNA

Query:  SSMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRKDAKHENHGGGSSLDAKR
                 +KSM+ HL G+KIV APV PKGR +E T+R D+KH NHGGGSS DA+R
Subjt:  SSMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRKDAKHENHGGGSSLDAKR

A0A1S3BZ75 uncharacterized protein LOC1034946542.7e-3444.36Show/hide
Query:  MIRARASWSRFS-------NRSFCSKFHIPTNNNSNNCRINGDSRVESDLRSYNEACKQLNNLNFMISSLNL----PRKRNLGIHFS-----YLSSSSLA
        M RARASWS FS        RSFCSK HI TN +SNN +INGD++V+ DL SY+EA KQL+NL+FM +S  L     +K+  G+ F      ++   SLA
Subjt:  MIRARASWSRFS-------NRSFCSKFHIPTNNNSNNCRINGDSRVESDLRSYNEACKQLNNLNFMISSLNL----PRKRNLGIHFS-----YLSSSSLA

Query:  LF-----------------------------------------------NGVKTRLDKLEETIKEIAIESRKQSGSDSIKKNSEKEVD--KTKHGENTNA
        ++                                                 VKTRLDKLE+TIKEIA+ESRKQSG+ +I KNSEK  D  KTKHG N + 
Subjt:  LF-----------------------------------------------NGVKTRLDKLEETIKEIAIESRKQSGSDSIKKNSEKEVD--KTKHGENTNA

Query:  SSMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRKDAKHENHGGGSSLDAKR
                 +KSM+ HL G+KIV APV PK  A+E T+R+D+KH N G GSSLD KR
Subjt:  SSMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRKDAKHENHGGGSSLDAKR

A0A6J1DGT5 uncharacterized protein LOC1110209347.4e-3244.75Show/hide
Query:  MIRARASWSRFS-------NRSFCSKFHIPTNNNSNNCRINGDSRVESDLRSYNEACKQLNNLNFMISSLNL----PRKRNLGIHFS-----YLSSSSLA
        M  AR SW RFS        RSFCSK H PTNNN NN       +VESDL SY EA KQL+NL+FM +S  L    P+K+  GI F      ++   SLA
Subjt:  MIRARASWSRFS-------NRSFCSKFHIPTNNNSNNCRINGDSRVESDLRSYNEACKQLNNLNFMISSLNL----PRKRNLGIHFS-----YLSSSSLA

Query:  LF-----------------------------------------------NGVKTRLDKLEETIKEIAIESRKQSGSDSIKKNSEK--EVDKTKHGENTNA
        ++                                                 VK RLDKLEETIKEIA+ESRK SGS +  KNSEK  E  K KHGEN   
Subjt:  LF-----------------------------------------------NGVKTRLDKLEETIKEIAIESRKQSGSDSIKKNSEK--EVDKTKHGENTNA

Query:  SSMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRKDAKHENHGGGSSLDAKR
         +MGNA E SKS+  HL  +KI  APV PKGR +E TS+++ +H N GGGSS DAKR
Subjt:  SSMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRKDAKHENHGGGSSLDAKR

A0A6J1GVZ5 uncharacterized protein LOC1114579853.9e-3345.7Show/hide
Query:  MIRARASWSRFSNR-------SFCSKFHIPTNNNSNNCRINGDSRVESDLRSYNEACKQLNNLNFMISSLNL----PRKRNLGIHFS-----YLSSSSLA
        M RARAS SRFS R        FCSK  I TN NSNN  ING ++VESDL SY EA KQL+NL+FM +S  L    P+K+  GI F      ++   SLA
Subjt:  MIRARASWSRFSNR-------SFCSKFHIPTNNNSNNCRINGDSRVESDLRSYNEACKQLNNLNFMISSLNL----PRKRNLGIHFS-----YLSSSSLA

Query:  LF----------------------------------------------NGVKTRLDKLEETIKEIAIESRKQSGSDSIKKNSEKE--VDKTKHGENTNAS
        ++                                                VKTRLDKLEETIKEIA+ESRKQSGS  + KNSEK   VDKTKHG N +  
Subjt:  LF----------------------------------------------NGVKTRLDKLEETIKEIAIESRKQSGSDSIKKNSEKE--VDKTKHGENTNAS

Query:  SMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRKDAKHENHGGGSSLDAKR
                SKSM+ HL G+KIV APV PK RA+  T+ +D+KH+N GG SS D+KR
Subjt:  SMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRKDAKHENHGGGSSLDAKR

A0A6J1IQM5 uncharacterized protein LOC1114796311.9e-3245.31Show/hide
Query:  MIRARASWSRFSNR-------SFCSKFHIPTNNNSNNCRINGDSRVESDLRSYNEACKQLNNLNFMISSLNL----PRKRNLGIHFS-----YLSSSSLA
        M RARAS SRFS R        FCSK  I TN NSNN  ING ++VESDL SY EA KQL+NL+FM +   L    P+K+  GI F      ++   SLA
Subjt:  MIRARASWSRFSNR-------SFCSKFHIPTNNNSNNCRINGDSRVESDLRSYNEACKQLNNLNFMISSLNL----PRKRNLGIHFS-----YLSSSSLA

Query:  LF----------------------------------------------NGVKTRLDKLEETIKEIAIESRKQSGSDSIKKNSEKE--VDKTKHGENTNAS
        ++                                                VKTRLDKLEETIKEIA+ESRKQSGS  + KNSEK   VDKTKHG N +  
Subjt:  LF----------------------------------------------NGVKTRLDKLEETIKEIAIESRKQSGSDSIKKNSEKE--VDKTKHGENTNAS

Query:  SMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRKDAKHENHGGGSSLDAKR
                SKSM+ HL G+KIV APV PK RA+  T+ +D+KH+N GG SS D+KR
Subjt:  SMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRKDAKHENHGGGSSLDAKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCGCGCCAGAGCCAGTTGGAGTCGATTTTCAAACCGATCATTTTGCTCGAAATTCCACATTCCGACCAACAATAACAGCAACAATTGTAGGATTAATGGCGACAG
CAGGGTTGAATCGGATCTGAGAAGCTACAACGAGGCTTGCAAGCAGCTGAATAACTTGAACTTCATGATCTCTTCACTGAACCTCCCAAGGAAAAGAAATTTGGGTATCC
ATTTCTCTTATCTATCTTCCTCTTCCTTGGCTTTATTCAATGGAGTTAAAACAAGACTTGATAAACTCGAGGAGACTATAAAGGAAATTGCTATTGAATCCAGAAAACAA
TCAGGGAGTGATAGTATAAAAAAGAACTCTGAGAAGGAAGTGGATAAAACCAAACATGGGGAAAATACTAATGCAAGCAGCATGGGGAATGCGCCAGAGTTGAGCAAGTC
TATGAATATTCATCTTAGTGGAGAGAAAATAGTAGCGGCCCCTGTTTTCCCCAAAGGGCGTGCAAATGAGTGCACATCACGAAAAGATGCTAAGCATGAAAACCACGGTG
GAGGATCTTCTCTAGATGCCAAGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGATTCGCGCCAGAGCCAGTTGGAGTCGATTTTCAAACCGATCATTTTGCTCGAAATTCCACATTCCGACCAACAATAACAGCAACAATTGTAGGATTAATGGCGACAG
CAGGGTTGAATCGGATCTGAGAAGCTACAACGAGGCTTGCAAGCAGCTGAATAACTTGAACTTCATGATCTCTTCACTGAACCTCCCAAGGAAAAGAAATTTGGGTATCC
ATTTCTCTTATCTATCTTCCTCTTCCTTGGCTTTATTCAATGGAGTTAAAACAAGACTTGATAAACTCGAGGAGACTATAAAGGAAATTGCTATTGAATCCAGAAAACAA
TCAGGGAGTGATAGTATAAAAAAGAACTCTGAGAAGGAAGTGGATAAAACCAAACATGGGGAAAATACTAATGCAAGCAGCATGGGGAATGCGCCAGAGTTGAGCAAGTC
TATGAATATTCATCTTAGTGGAGAGAAAATAGTAGCGGCCCCTGTTTTCCCCAAAGGGCGTGCAAATGAGTGCACATCACGAAAAGATGCTAAGCATGAAAACCACGGTG
GAGGATCTTCTCTAGATGCCAAGAGATGA
Protein sequenceShow/hide protein sequence
MIRARASWSRFSNRSFCSKFHIPTNNNSNNCRINGDSRVESDLRSYNEACKQLNNLNFMISSLNLPRKRNLGIHFSYLSSSSLALFNGVKTRLDKLEETIKEIAIESRKQ
SGSDSIKKNSEKEVDKTKHGENTNASSMGNAPELSKSMNIHLSGEKIVAAPVFPKGRANECTSRKDAKHENHGGGSSLDAKR