; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg04213 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04213
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionSAM domain-containing protein
Genome locationCarg_Chr01:742303..742875
RNA-Seq ExpressionCarg04213
SyntenyCarg04213
Gene Ontology termsNA
InterPro domainsIPR013761 - Sterile alpha motif/pointed domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606819.1 hypothetical protein SDJN03_00161, partial [Cucurbita argyrosperma subsp. sororia]1.0e-96100Show/hide
Query:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDGDDS
        MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDGDDS
Subjt:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDGDDS

Query:  KALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNGSPAPGVWPRIESFSGPLVYDLRRDEKKEEEEDGYWSNGVEEIR
        KALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNGSPAPGVWPRIESFSGPLVYDLRRDEKKEEEEDGYWSNGVEEIR
Subjt:  KALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNGSPAPGVWPRIESFSGPLVYDLRRDEKKEEEEDGYWSNGVEEIR

XP_022153409.1 uncharacterized protein LOC111020921 [Momordica charantia]2.1e-8182.38Show/hide
Query:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFS--VHDGD
        MDWFSWLSKTTLDPSLVYEYGLA +HNELE++DIVYFNHEFLQS+GISIAKHRLEILKLARK+ ALHPRP+TRLLLAIKRTKRCF+ LIRNFS      D
Subjt:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFS--VHDGD

Query:  DSKALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNG-SPAPGVWPRIESFSGPLVYDLRRDEKKEEEEDGYWSNGVEEIRWDTMFQNLKPT
        DSKALVVVPKSTY+GKLLKRNKKL++AKQQG  LLTNG SPAP   PR +SFSGP+VY+LRR    EEEEDGYW NGVEEIRWDTMFQNLKPT
Subjt:  DSKALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNG-SPAPGVWPRIESFSGPLVYDLRRDEKKEEEEDGYWSNGVEEIRWDTMFQNLKPT

XP_022948497.1 uncharacterized protein LOC111452156 [Cucurbita moschata]1.9e-10399.47Show/hide
Query:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDGDDS
        MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDGDDS
Subjt:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDGDDS

Query:  KALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNGSPAPGVWPRIESFSGPLVYDLRRDEKKEEEEDGYWSNGVEEIRWDTMFQNLKPT
        KALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNGSPAPGVWPRIESFSGPLVYDLRRDEKKEEEEDG WSNGVEEIRWDTMFQNLKPT
Subjt:  KALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNGSPAPGVWPRIESFSGPLVYDLRRDEKKEEEEDGYWSNGVEEIRWDTMFQNLKPT

XP_022998747.1 uncharacterized protein LOC111493318 [Cucurbita maxima]4.3e-10399.48Show/hide
Query:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDGDDS
        MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDGDDS
Subjt:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDGDDS

Query:  KALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNGSPAPGVWPRIESFSGPLVYDLRRDEKK-EEEEDGYWSNGVEEIRWDTMFQNLKPT
        KALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNGSPAPGVWPRIESFSGPLVYDLRRDEKK EEEEDGYWSNGVEEIRWDTMFQNLKPT
Subjt:  KALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNGSPAPGVWPRIESFSGPLVYDLRRDEKK-EEEEDGYWSNGVEEIRWDTMFQNLKPT

XP_023525324.1 uncharacterized protein LOC111788960 [Cucurbita pepo subsp. pepo]1.7e-104100Show/hide
Query:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDGDDS
        MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDGDDS
Subjt:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDGDDS

Query:  KALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNGSPAPGVWPRIESFSGPLVYDLRRDEKKEEEEDGYWSNGVEEIRWDTMFQNLKPT
        KALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNGSPAPGVWPRIESFSGPLVYDLRRDEKKEEEEDGYWSNGVEEIRWDTMFQNLKPT
Subjt:  KALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNGSPAPGVWPRIESFSGPLVYDLRRDEKKEEEEDGYWSNGVEEIRWDTMFQNLKPT

TrEMBL top hitse value%identityAlignment
A0A5A7TQT5 Uncharacterized protein4.9e-6871.13Show/hide
Query:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDG--D
        MDWFSWLSKT+L PSLVYEYGLAL++NELE EDI+YFNHEFLQSIGISIAKHRLEILKL RK+ ALHPRPITR+LLA+K+TKR FA LIRNF+ HD   +
Subjt:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDG--D

Query:  DSKALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNGSPAPGV--WPRIESFSGPLVYDLRRDEKKEEEEDGYWSNGVEEIRWDTMFQNLKPT
        +SKALV+VPKS+Y+ K+LKRNK   V K QGRFLLTNGSP   V    RI+ FSGP++YD+R     EEE+      GVEEIRWD MFQNLKPT
Subjt:  DSKALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNGSPAPGV--WPRIESFSGPLVYDLRRDEKKEEEEDGYWSNGVEEIRWDTMFQNLKPT

A0A5D3E0J4 Uncharacterized protein4.9e-6870.62Show/hide
Query:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDG--D
        MDWFSWLSKT+L PSLVYEYGLAL++NELE EDI+YFNHEFLQSIGISIAKHRLEILKL RK+ ALHPRPITR+LLA+K+TKR FA LIRNF+ HD   +
Subjt:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDG--D

Query:  DSKALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNGSP--APGVWPRIESFSGPLVYDLRRDEKKEEEEDGYWSNGVEEIRWDTMFQNLKPT
        +SKALV+VPKS+Y+ K+LKRNK   V K QGRFLLTNGSP     +  RI+ FSGP++YD+R     EEE+      GVEEIRWD MFQNLKPT
Subjt:  DSKALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNGSP--APGVWPRIESFSGPLVYDLRRDEKKEEEEDGYWSNGVEEIRWDTMFQNLKPT

A0A6J1DIZ2 uncharacterized protein LOC1110209211.0e-8182.38Show/hide
Query:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFS--VHDGD
        MDWFSWLSKTTLDPSLVYEYGLA +HNELE++DIVYFNHEFLQS+GISIAKHRLEILKLARK+ ALHPRP+TRLLLAIKRTKRCF+ LIRNFS      D
Subjt:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFS--VHDGD

Query:  DSKALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNG-SPAPGVWPRIESFSGPLVYDLRRDEKKEEEEDGYWSNGVEEIRWDTMFQNLKPT
        DSKALVVVPKSTY+GKLLKRNKKL++AKQQG  LLTNG SPAP   PR +SFSGP+VY+LRR    EEEEDGYW NGVEEIRWDTMFQNLKPT
Subjt:  DSKALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNG-SPAPGVWPRIESFSGPLVYDLRRDEKKEEEEDGYWSNGVEEIRWDTMFQNLKPT

A0A6J1G9F1 uncharacterized protein LOC1114521569.4e-10499.47Show/hide
Query:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDGDDS
        MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDGDDS
Subjt:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDGDDS

Query:  KALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNGSPAPGVWPRIESFSGPLVYDLRRDEKKEEEEDGYWSNGVEEIRWDTMFQNLKPT
        KALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNGSPAPGVWPRIESFSGPLVYDLRRDEKKEEEEDG WSNGVEEIRWDTMFQNLKPT
Subjt:  KALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNGSPAPGVWPRIESFSGPLVYDLRRDEKKEEEEDGYWSNGVEEIRWDTMFQNLKPT

A0A6J1K8U0 uncharacterized protein LOC1114933182.1e-10399.48Show/hide
Query:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDGDDS
        MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDGDDS
Subjt:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDGDDS

Query:  KALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNGSPAPGVWPRIESFSGPLVYDLRRDEKK-EEEEDGYWSNGVEEIRWDTMFQNLKPT
        KALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNGSPAPGVWPRIESFSGPLVYDLRRDEKK EEEEDGYWSNGVEEIRWDTMFQNLKPT
Subjt:  KALVVVPKSTYSGKLLKRNKKLMVAKQQGRFLLTNGSPAPGVWPRIESFSGPLVYDLRRDEKK-EEEEDGYWSNGVEEIRWDTMFQNLKPT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G15760.1 Sterile alpha motif (SAM) domain-containing protein5.2e-4649.76Show/hide
Query:  WFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHP----RPITRLLLAIKRTKRCFAKLIRNF--SVHD
        WFSWLS+T L+PSL++EYGL+ S NELE EDI YF+HEFLQS+GISIAKHRLEILKLAR+D    P    R I+R++ AIK+T++C +  +R +     +
Subjt:  WFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHP----RPITRLLLAIKRTKRCFAKLIRNF--SVHD

Query:  GDDSKALVVVPKST------YSGKLLKRNKKLMV-------AKQQGRFLLTNGSPAPGVWPRIESFSGPLVYDLRRDEKKEEEEDGYWSNGVEEIRWDTM
           S+ALV+VPK T      + G  LKRNK+ ++        ++Q R LLTNG+P      RI+SFS P+V+D    ++K   +D Y+    E+I+WD+M
Subjt:  GDDSKALVVVPKST------YSGKLLKRNKKLMV-------AKQQGRFLLTNGSPAPGVWPRIESFSGPLVYDLRRDEKKEEEEDGYWSNGVEEIRWDTM

Query:  FQNLKPT
        FQNLKPT
Subjt:  FQNLKPT

AT1G80520.1 Sterile alpha motif (SAM) domain-containing protein3.0e-4651.96Show/hide
Query:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKD---GALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDG
        MDWFSWLS+T L+ SL+YEYGL+ S+NELE EDI YFNHEFLQS+GISIAKHRLEILKLAR+D     L  R I R+L+AIK+T +CF++ +R + +   
Subjt:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKD---GALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDG

Query:  DDSKALVVVPKSTYS---GKLLKRNKKLMVAKQQG------RFLLTNGSPAPGVWPRIESFSGPLVYDLRRDEKKEEEEDGYWSNG--VEEIRWDTMFQN
        + S+ALVVV +ST S   G+     KK +V    G      R LLTNG+P      R++SFS P V          E++D +W N    E+I+WD+MFQN
Subjt:  DDSKALVVVPKSTYS---GKLLKRNKKLMVAKQQG------RFLLTNGSPAPGVWPRIESFSGPLVYDLRRDEKKEEEEDGYWSNG--VEEIRWDTMFQN

Query:  LKPT
        LKPT
Subjt:  LKPT

AT2G12462.1 BEST Arabidopsis thaliana protein match is: Sterile alpha motif (SAM) domain-containing protein (TAIR:AT1G15760.1)5.4e-1950Show/hide
Query:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKD----GALHPRPITRLLLA--IKRTK
        MDWFSWLSKT LDP+L YEYGL  +  +L+ EDI  FNH FL+ +G+++ KHR+EILKL++++     + + RP++  L++  IK TK
Subjt:  MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKD----GALHPRPITRLLLA--IKRTK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTGGTTCTCATGGCTTTCAAAAACGACCCTAGATCCTTCTCTCGTCTATGAATATGGCCTCGCCTTATCCCACAATGAGCTCGAACAGGAAGACATCGTTTATTT
CAACCACGAATTTCTCCAGAGCATCGGAATCTCCATTGCCAAGCACCGTCTCGAGATCCTCAAGCTAGCTCGCAAGGACGGCGCTCTCCATCCTCGCCCGATCACTCGTC
TCCTTCTCGCAATCAAGAGAACCAAGCGCTGTTTCGCCAAGTTGATTCGCAATTTCTCTGTCCATGATGGAGACGACAGCAAAGCCCTAGTCGTCGTCCCTAAATCGACC
TATTCTGGGAAATTGCTGAAGAGGAATAAGAAATTGATGGTCGCGAAACAGCAAGGGAGGTTTCTACTCACTAATGGAAGTCCAGCGCCAGGTGTGTGGCCGCGAATCGA
GAGCTTCTCCGGTCCGCTTGTGTACGATCTTCGCCGGGATGAGAAAAAGGAGGAGGAGGAGGATGGTTACTGGAGCAATGGCGTTGAGGAGATCAGGTGGGATACGATGT
TTCAGAATTTGAAACCTACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATTGGTTCTCATGGCTTTCAAAAACGACCCTAGATCCTTCTCTCGTCTATGAATATGGCCTCGCCTTATCCCACAATGAGCTCGAACAGGAAGACATCGTTTATTT
CAACCACGAATTTCTCCAGAGCATCGGAATCTCCATTGCCAAGCACCGTCTCGAGATCCTCAAGCTAGCTCGCAAGGACGGCGCTCTCCATCCTCGCCCGATCACTCGTC
TCCTTCTCGCAATCAAGAGAACCAAGCGCTGTTTCGCCAAGTTGATTCGCAATTTCTCTGTCCATGATGGAGACGACAGCAAAGCCCTAGTCGTCGTCCCTAAATCGACC
TATTCTGGGAAATTGCTGAAGAGGAATAAGAAATTGATGGTCGCGAAACAGCAAGGGAGGTTTCTACTCACTAATGGAAGTCCAGCGCCAGGTGTGTGGCCGCGAATCGA
GAGCTTCTCCGGTCCGCTTGTGTACGATCTTCGCCGGGATGAGAAAAAGGAGGAGGAGGAGGATGGTTACTGGAGCAATGGCGTTGAGGAGATCAGGTGGGATACGATGT
TTCAGAATTTGAAACCTACCTAA
Protein sequenceShow/hide protein sequence
MDWFSWLSKTTLDPSLVYEYGLALSHNELEQEDIVYFNHEFLQSIGISIAKHRLEILKLARKDGALHPRPITRLLLAIKRTKRCFAKLIRNFSVHDGDDSKALVVVPKST
YSGKLLKRNKKLMVAKQQGRFLLTNGSPAPGVWPRIESFSGPLVYDLRRDEKKEEEEDGYWSNGVEEIRWDTMFQNLKPT