; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg04220 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04220
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCUE domain-containing protein
Genome locationCarg_Chr01:689643..692446
RNA-Seq ExpressionCarg04220
SyntenyCarg04220
Gene Ontology termsGO:0043130 - ubiquitin binding (molecular function)
InterPro domainsIPR003892 - Ubiquitin system component CUE
IPR009060 - UBA-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7036518.1 hypothetical protein SDJN02_00136, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-105100Show/hide
Query:  MSAVVCGTKRSFFEELPPSPPVSKRLRCSSTTSPIRFAASCLIDQLQNLFPQMDHQLLVRVLEECGNDLDAAIKSLSNMCLGSTVENPVATTAAETNLDQ
        MSAVVCGTKRSFFEELPPSPPVSKRLRCSSTTSPIRFAASCLIDQLQNLFPQMDHQLLVRVLEECGNDLDAAIKSLSNMCLGSTVENPVATTAAETNLDQ
Subjt:  MSAVVCGTKRSFFEELPPSPPVSKRLRCSSTTSPIRFAASCLIDQLQNLFPQMDHQLLVRVLEECGNDLDAAIKSLSNMCLGSTVENPVATTAAETNLDQ

Query:  GSFADNGEPAASENLSAPSSVSLDGREWVDLFVREMMSATSVDDARTRAARALEALESSISARAGADAAQNFHKPLFNLMIVGGGRSSYCQVYALKLQDF
        GSFADNGEPAASENLSAPSSVSLDGREWVDLFVREMMSATSVDDARTRAARALEALESSISARAGADAAQNFHKPLFNLMIVGGGRSSYCQVYALKLQDF
Subjt:  GSFADNGEPAASENLSAPSSVSLDGREWVDLFVREMMSATSVDDARTRAARALEALESSISARAGADAAQNFHKPLFNLMIVGGGRSSYCQVYALKLQDF

Query:  RI
        RI
Subjt:  RI

XP_022949479.1 uncharacterized protein LOC111452812 isoform X1 [Cucurbita moschata]3.9e-8698.86Show/hide
Query:  MSAVVCGTKRSFFEELPPSPPVSKRLRCSSTTSPIRFAASCLIDQLQNLFPQMDHQLLVRVLEECGNDLDAAIKSLSNMCLGSTVENPVATTAAETNLDQ
        MSAVVCGTKRSFFEELPPSPPVSKRLRCSSTTSPIRFAASCLIDQLQNLFPQMDHQLLVRVLEECGNDLDAAIKSLSNMCLGSTVENPVATTAAETNLD 
Subjt:  MSAVVCGTKRSFFEELPPSPPVSKRLRCSSTTSPIRFAASCLIDQLQNLFPQMDHQLLVRVLEECGNDLDAAIKSLSNMCLGSTVENPVATTAAETNLDQ

Query:  -GSFADNGEPAASENLSAPSSVSLDGREWVDLFVREMMSATSVDDARTRAARALEALESSISARAGADAAQNFHK
         GSFADNGEPAASENLSAPSSVSLDGREWVDLFVREMMSATSVDDARTRAARALEALESSISARAGADAAQNFHK
Subjt:  -GSFADNGEPAASENLSAPSSVSLDGREWVDLFVREMMSATSVDDARTRAARALEALESSISARAGADAAQNFHK

XP_022949480.1 uncharacterized protein LOC111452812 isoform X2 [Cucurbita moschata]4.2e-88100Show/hide
Query:  MSAVVCGTKRSFFEELPPSPPVSKRLRCSSTTSPIRFAASCLIDQLQNLFPQMDHQLLVRVLEECGNDLDAAIKSLSNMCLGSTVENPVATTAAETNLDQ
        MSAVVCGTKRSFFEELPPSPPVSKRLRCSSTTSPIRFAASCLIDQLQNLFPQMDHQLLVRVLEECGNDLDAAIKSLSNMCLGSTVENPVATTAAETNLDQ
Subjt:  MSAVVCGTKRSFFEELPPSPPVSKRLRCSSTTSPIRFAASCLIDQLQNLFPQMDHQLLVRVLEECGNDLDAAIKSLSNMCLGSTVENPVATTAAETNLDQ

Query:  GSFADNGEPAASENLSAPSSVSLDGREWVDLFVREMMSATSVDDARTRAARALEALESSISARAGADAAQNFHK
        GSFADNGEPAASENLSAPSSVSLDGREWVDLFVREMMSATSVDDARTRAARALEALESSISARAGADAAQNFHK
Subjt:  GSFADNGEPAASENLSAPSSVSLDGREWVDLFVREMMSATSVDDARTRAARALEALESSISARAGADAAQNFHK

XP_022998357.1 uncharacterized protein LOC111493023 [Cucurbita maxima]1.7e-8698.28Show/hide
Query:  MSAVVCGTKRSFFEELPPSPPVSKRLRCSSTTSPIRFAASCLIDQLQNLFPQMDHQLLVRVLEECGNDLDAAIKSLSNMCLGSTVENPVATTAAETNLDQ
        MSAVVCGTKRSFFEELPPSPPVSKRLRCSSTTSPIRFAASCLIDQLQNLFPQMDHQLLVRVLEECGNDLDAAIKSLSNMCLGSTVENPVATT AETNLDQ
Subjt:  MSAVVCGTKRSFFEELPPSPPVSKRLRCSSTTSPIRFAASCLIDQLQNLFPQMDHQLLVRVLEECGNDLDAAIKSLSNMCLGSTVENPVATTAAETNLDQ

Query:  GSFADNGEPAASENLSAPSSVSLDGREWVDLFVREMMSATSVDDARTRAARALEALESSISARAGADAAQNFHK
        GSFADNGEPAASENLSAPS VSLDGREWVDLFVREMMSATSV+DARTRAARALEALESSISARAGADAAQNFHK
Subjt:  GSFADNGEPAASENLSAPSSVSLDGREWVDLFVREMMSATSVDDARTRAARALEALESSISARAGADAAQNFHK

XP_023525880.1 uncharacterized protein LOC111789361 [Cucurbita pepo subsp. pepo]7.8e-8798.85Show/hide
Query:  MSAVVCGTKRSFFEELPPSPPVSKRLRCSSTTSPIRFAASCLIDQLQNLFPQMDHQLLVRVLEECGNDLDAAIKSLSNMCLGSTVENPVATTAAETNLDQ
        MSAVVCGTKRSFFEELPPSPPVSKRLRCSSTTSPIRFAASCLIDQLQNLFPQMDHQLLVRVLEECGNDLDAAIKSLSNMCLGSTVENPVATTAAETNLDQ
Subjt:  MSAVVCGTKRSFFEELPPSPPVSKRLRCSSTTSPIRFAASCLIDQLQNLFPQMDHQLLVRVLEECGNDLDAAIKSLSNMCLGSTVENPVATTAAETNLDQ

Query:  GSFADNGEPAASENLSAPSSVSLDGREWVDLFVREMMSATSVDDARTRAARALEALESSISARAGADAAQNFHK
        GSFADNGEPAASENLSAP+SVSLDGREWVDLFVREMMSATSVDDARTRAARALEALESSISARAGADAAQN HK
Subjt:  GSFADNGEPAASENLSAPSSVSLDGREWVDLFVREMMSATSVDDARTRAARALEALESSISARAGADAAQNFHK

TrEMBL top hitse value%identityAlignment
A0A6J1DJ22 uncharacterized protein LOC1110209862.8e-7485.06Show/hide
Query:  MSAVVCGTKRSFFEELPPSPPVSKRLRCSSTTSPIRFAASCLIDQLQNLFPQMDHQLLVRVLEECGNDLDAAIKSLSNMCLGSTVENPVATTAAETNLDQ
        MSAVVCGTKRSFFEELPPSPP++KRLRCS++TSPIRFAA  LIDQL +LFP MDHQLL R LEECGNDLDAAIK LS++CLGS  ENP AT   ETNLDQ
Subjt:  MSAVVCGTKRSFFEELPPSPPVSKRLRCSSTTSPIRFAASCLIDQLQNLFPQMDHQLLVRVLEECGNDLDAAIKSLSNMCLGSTVENPVATTAAETNLDQ

Query:  GSFADNGEPAASENLSAPSSVSLDGREWVDLFVREMMSATSVDDARTRAARALEALESSISARAGADAAQNFHK
        GSF ++GE AASENLSAPSSVSLDGREWVDLFVREMMSATSVDDARTRAARALEALE+SISARAGADA QNFHK
Subjt:  GSFADNGEPAASENLSAPSSVSLDGREWVDLFVREMMSATSVDDARTRAARALEALESSISARAGADAAQNFHK

A0A6J1GCW0 uncharacterized protein LOC111452812 isoform X22.0e-88100Show/hide
Query:  MSAVVCGTKRSFFEELPPSPPVSKRLRCSSTTSPIRFAASCLIDQLQNLFPQMDHQLLVRVLEECGNDLDAAIKSLSNMCLGSTVENPVATTAAETNLDQ
        MSAVVCGTKRSFFEELPPSPPVSKRLRCSSTTSPIRFAASCLIDQLQNLFPQMDHQLLVRVLEECGNDLDAAIKSLSNMCLGSTVENPVATTAAETNLDQ
Subjt:  MSAVVCGTKRSFFEELPPSPPVSKRLRCSSTTSPIRFAASCLIDQLQNLFPQMDHQLLVRVLEECGNDLDAAIKSLSNMCLGSTVENPVATTAAETNLDQ

Query:  GSFADNGEPAASENLSAPSSVSLDGREWVDLFVREMMSATSVDDARTRAARALEALESSISARAGADAAQNFHK
        GSFADNGEPAASENLSAPSSVSLDGREWVDLFVREMMSATSVDDARTRAARALEALESSISARAGADAAQNFHK
Subjt:  GSFADNGEPAASENLSAPSSVSLDGREWVDLFVREMMSATSVDDARTRAARALEALESSISARAGADAAQNFHK

A0A6J1GCX8 uncharacterized protein LOC111452812 isoform X11.9e-8698.86Show/hide
Query:  MSAVVCGTKRSFFEELPPSPPVSKRLRCSSTTSPIRFAASCLIDQLQNLFPQMDHQLLVRVLEECGNDLDAAIKSLSNMCLGSTVENPVATTAAETNLDQ
        MSAVVCGTKRSFFEELPPSPPVSKRLRCSSTTSPIRFAASCLIDQLQNLFPQMDHQLLVRVLEECGNDLDAAIKSLSNMCLGSTVENPVATTAAETNLD 
Subjt:  MSAVVCGTKRSFFEELPPSPPVSKRLRCSSTTSPIRFAASCLIDQLQNLFPQMDHQLLVRVLEECGNDLDAAIKSLSNMCLGSTVENPVATTAAETNLDQ

Query:  -GSFADNGEPAASENLSAPSSVSLDGREWVDLFVREMMSATSVDDARTRAARALEALESSISARAGADAAQNFHK
         GSFADNGEPAASENLSAPSSVSLDGREWVDLFVREMMSATSVDDARTRAARALEALESSISARAGADAAQNFHK
Subjt:  -GSFADNGEPAASENLSAPSSVSLDGREWVDLFVREMMSATSVDDARTRAARALEALESSISARAGADAAQNFHK

A0A6J1GUV7 uncharacterized protein LOC1114576861.4e-6881.14Show/hide
Query:  MSAVVCGTKRSFFEELPPSPPVSKRLRCSSTTSPIRF-AASCLIDQLQNLFPQMDHQLLVRVLEECGNDLDAAIKSLSNMCLGSTVENPVATTAAETNLD
        MSAVVCGTKRSFFEELPPSPP+SKRLRCSS+TSPI F A S LID L +LFP MDHQLLVR LEECGNDLDAAIKSLS++CLGS VENPVAT   E NLD
Subjt:  MSAVVCGTKRSFFEELPPSPPVSKRLRCSSTTSPIRF-AASCLIDQLQNLFPQMDHQLLVRVLEECGNDLDAAIKSLSNMCLGSTVENPVATTAAETNLD

Query:  QGSFADNGEPAASENLSAPSSVSLDGREWVDLFVREMMSATSVDDARTRAARALEALESSISARAGADAAQNFHK
        QGS A+NGE AASEN S PSSVSLDGR+W+DLFV EM SA  V DAR+RAARALEALE+SISARAG DAAQNFHK
Subjt:  QGSFADNGEPAASENLSAPSSVSLDGREWVDLFVREMMSATSVDDARTRAARALEALESSISARAGADAAQNFHK

A0A6J1K7Q5 uncharacterized protein LOC1114930238.5e-8798.28Show/hide
Query:  MSAVVCGTKRSFFEELPPSPPVSKRLRCSSTTSPIRFAASCLIDQLQNLFPQMDHQLLVRVLEECGNDLDAAIKSLSNMCLGSTVENPVATTAAETNLDQ
        MSAVVCGTKRSFFEELPPSPPVSKRLRCSSTTSPIRFAASCLIDQLQNLFPQMDHQLLVRVLEECGNDLDAAIKSLSNMCLGSTVENPVATT AETNLDQ
Subjt:  MSAVVCGTKRSFFEELPPSPPVSKRLRCSSTTSPIRFAASCLIDQLQNLFPQMDHQLLVRVLEECGNDLDAAIKSLSNMCLGSTVENPVATTAAETNLDQ

Query:  GSFADNGEPAASENLSAPSSVSLDGREWVDLFVREMMSATSVDDARTRAARALEALESSISARAGADAAQNFHK
        GSFADNGEPAASENLSAPS VSLDGREWVDLFVREMMSATSV+DARTRAARALEALESSISARAGADAAQNFHK
Subjt:  GSFADNGEPAASENLSAPSSVSLDGREWVDLFVREMMSATSVDDARTRAARALEALESSISARAGADAAQNFHK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G80040.1 FUNCTIONS IN: molecular_function unknown3.2e-2241.81Show/hide
Query:  MSAVVCGTKRSFFEELPPSPPVSKRLRC-SSTTSPI-RFAASCLIDQLQNLFPQMDHQLLVRVLEECGNDLDAAIKSLSNMCLGSTVENPVATTAAETNL
        MSAV CGTKRS+F++   SPP SKR RC S + SPI     S  +DQL + FP ++  +LV+ LE+ G+D +AA+KSL +    S+ E      AA    
Subjt:  MSAVVCGTKRSFFEELPPSPPVSKRLRC-SSTTSPI-RFAASCLIDQLQNLFPQMDHQLLVRVLEECGNDLDAAIKSLSNMCLGSTVENPVATTAAETNL

Query:  DQGSFA-DNGEPAASENLSAPSSVSLDGREWVDLFVREMMSATSVDDARTRAARALEALESSISARAGADAAQNFHK
         Q + A   G P  S            G +WV+L VRE++ ++  DDA+ RAAR LEALE  +SARA  +A   F +
Subjt:  DQGSFA-DNGEPAASENLSAPSSVSLDGREWVDLFVREMMSATSVDDARTRAARALEALESSISARAGADAAQNFHK

AT1G80040.2 FUNCTIONS IN: molecular_function unknown3.2e-2241.81Show/hide
Query:  MSAVVCGTKRSFFEELPPSPPVSKRLRC-SSTTSPI-RFAASCLIDQLQNLFPQMDHQLLVRVLEECGNDLDAAIKSLSNMCLGSTVENPVATTAAETNL
        MSAV CGTKRS+F++   SPP SKR RC S + SPI     S  +DQL + FP ++  +LV+ LE+ G+D +AA+KSL +    S+ E      AA    
Subjt:  MSAVVCGTKRSFFEELPPSPPVSKRLRC-SSTTSPI-RFAASCLIDQLQNLFPQMDHQLLVRVLEECGNDLDAAIKSLSNMCLGSTVENPVATTAAETNL

Query:  DQGSFA-DNGEPAASENLSAPSSVSLDGREWVDLFVREMMSATSVDDARTRAARALEALESSISARAGADAAQNFHK
         Q + A   G P  S            G +WV+L VRE++ ++  DDA+ RAAR LEALE  +SARA  +A   F +
Subjt:  DQGSFA-DNGEPAASENLSAPSSVSLDGREWVDLFVREMMSATSVDDARTRAARALEALESSISARAGADAAQNFHK

AT5G32440.1 Ubiquitin system component Cue protein2.0e-3548.15Show/hide
Query:  MSAVVCGTKRSFFEEL-PPSPPVSKRLRCSSTTSPIRF------AASCLIDQLQNLFPQMDHQLLVRVLEECGNDLDAAIKSLSNMCLGSTVEN-PVATT
        MSA+VCG KRS FE+L   SPPVSK+LRC S++S  RF      ++S L+D L  +FP MD Q+L R +EECG+DLD+AI+ L+ + L S  +N   AT 
Subjt:  MSAVVCGTKRSFFEEL-PPSPPVSKRLRCSSTTSPIRF------AASCLIDQLQNLFPQMDHQLLVRVLEECGNDLDAAIKSLSNMCLGSTVEN-PVATT

Query:  AAETNLDQGSFADNGEPAASENLSAPSSVSLDGREWVDLFVREMMSATSVDDARTRAARALEALESSISARAGADAAQNFHKPLFNLMI
         +   + + +     + +A E    P+ ++LDG EWV+LFVREMM+A+ + DA+ RAARALEALE SI+AR G DA QN  +   N+M+
Subjt:  AAETNLDQGSFADNGEPAASENLSAPSSVSLDGREWVDLFVREMMSATSVDDARTRAARALEALESSISARAGADAAQNFHKPLFNLMI

AT5G32440.2 Ubiquitin system component Cue protein1.5e-3548.91Show/hide
Query:  MSAVVCGTKRSFFEEL-PPSPPVSKRLRCSSTTSPIRF------AASCLIDQLQNLFPQMDHQLLVRVLEECGNDLDAAIKSLSNMCLGSTVEN-PVATT
        MSA+VCG KRS FE+L   SPPVSK+LRC S++S  RF      ++S L+D L  +FP MD Q+L R +EECG+DLD+AI+ L+ + L S  +N   AT 
Subjt:  MSAVVCGTKRSFFEEL-PPSPPVSKRLRCSSTTSPIRF------AASCLIDQLQNLFPQMDHQLLVRVLEECGNDLDAAIKSLSNMCLGSTVEN-PVATT

Query:  AAETNLDQGSFADNGEPAASENLSAPSSVSLDGREWVDLFVREMMSATSVDDARTRAARALEALESSISARAGADAAQNFHKPL
         +   + + +     + +A E    P+ ++LDG EWV+LFVREMM+A+ + DA+ RAARALEALE SI+AR G DA QN  + L
Subjt:  AAETNLDQGSFADNGEPAASENLSAPSSVSLDGREWVDLFVREMMSATSVDDARTRAARALEALESSISARAGADAAQNFHKPL

AT5G32440.3 Ubiquitin system component Cue protein7.4e-3547.87Show/hide
Query:  MSAVVCGTKRSFFEEL-PPSPPVSKRLRCSSTTSPIRF------AASCLIDQLQNLFPQMDHQLLVRVLEECGNDLDAAIKSLSNMCLGSTVENPVATTA
        MSA+VCG KRS FE+L   SPPVSK+LRC S++S  RF      ++S L+D L  +FP MD Q+L R +EECG+DLD+AI+ L+ + L S  +N  + T 
Subjt:  MSAVVCGTKRSFFEEL-PPSPPVSKRLRCSSTTSPIRF------AASCLIDQLQNLFPQMDHQLLVRVLEECGNDLDAAIKSLSNMCLGSTVENPVATTA

Query:  AETNLDQGSFADNGEPAASENLSAPSSVSLDGREWVDLFVREMMSATSVDDARTRAARALEALESSISARAGADAAQNFHKPLFNLMI
            + Q    +  +   S     P+ ++LDG EWV+LFVREMM+A+ + DA+ RAARALEALE SI+AR G DA QN  +   N+M+
Subjt:  AETNLDQGSFADNGEPAASENLSAPSSVSLDGREWVDLFVREMMSATSVDDARTRAARALEALESSISARAGADAAQNFHKPLFNLMI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGCTGTGGTGTGCGGAACCAAAAGATCTTTCTTTGAAGAACTACCGCCTTCGCCTCCCGTTTCCAAGCGCCTCCGCTGCTCCTCTACTACTTCTCCGATTAGATT
CGCTGCGTCCTGTCTTATTGATCAGCTACAGAATTTGTTTCCTCAAATGGACCATCAGCTTCTTGTGAGAGTCCTTGAAGAATGTGGCAACGACTTGGATGCTGCCATCA
AAAGTCTGAGTAACATGTGTTTGGGATCTACTGTTGAGAATCCTGTTGCTACTACAGCAGCAGAGACAAATTTGGACCAAGGTTCATTTGCTGACAATGGGGAGCCTGCT
GCTTCAGAGAATTTGTCAGCACCAAGCAGTGTTTCTCTTGATGGTAGGGAATGGGTTGACTTGTTTGTAAGGGAAATGATGAGCGCTACTAGTGTAGATGATGCTAGGAC
TCGTGCAGCAAGAGCATTAGAGGCTTTAGAGAGCTCGATTAGTGCACGTGCTGGTGCTGATGCCGCACAAAATTTCCACAAGCCTTTGTTCAATTTGATGATTGTTGGTG
GTGGAAGATCAAGTTATTGTCAAGTTTATGCTCTTAAATTACAAGACTTTCGGATC
mRNA sequenceShow/hide mRNA sequence
AAAGAGACCATAAGAAACCTAACCCCAAAGAAACCAAAATCTTTCGTTCCCTTCTTCTTCTTCTTCCTTTTTCCTCCTGCCCAAGCAAAAGCTCTCTTCTCCAGCCCTAA
CACTTCTTCCCTTTCTGTTCGTCGCGTCCTCCTTCAATCGTGTTCGAATTGGTGTTTGCTTCGGGGACGAACGGTAATTTTAGGAATTAGATTCTGCAAGCGACAACCGG
GAGACGATGTCTGCTGTGGTGTGCGGAACCAAAAGATCTTTCTTTGAAGAACTACCGCCTTCGCCTCCCGTTTCCAAGCGCCTCCGCTGCTCCTCTACTACTTCTCCGAT
TAGATTCGCTGCGTCCTGTCTTATTGATCAGCTACAGAATTTGTTTCCTCAAATGGACCATCAGCTTCTTGTGAGAGTCCTTGAAGAATGTGGCAACGACTTGGATGCTG
CCATCAAAAGTCTGAGTAACATGTGTTTGGGATCTACTGTTGAGAATCCTGTTGCTACTACAGCAGCAGAGACAAATTTGGACCAAGGTTCATTTGCTGACAATGGGGAG
CCTGCTGCTTCAGAGAATTTGTCAGCACCAAGCAGTGTTTCTCTTGATGGTAGGGAATGGGTTGACTTGTTTGTAAGGGAAATGATGAGCGCTACTAGTGTAGATGATGC
TAGGACTCGTGCAGCAAGAGCATTAGAGGCTTTAGAGAGCTCGATTAGTGCACGTGCTGGTGCTGATGCCGCACAAAATTTCCACAAGCCTTTGTTCAATTTGATGATTG
TTGGTGGTGGAAGATCAAGTTATTGTCAAGTTTATGCTCTTAAATTACAAGACTTTCGGATC
Protein sequenceShow/hide protein sequence
MSAVVCGTKRSFFEELPPSPPVSKRLRCSSTTSPIRFAASCLIDQLQNLFPQMDHQLLVRVLEECGNDLDAAIKSLSNMCLGSTVENPVATTAAETNLDQGSFADNGEPA
ASENLSAPSSVSLDGREWVDLFVREMMSATSVDDARTRAARALEALESSISARAGADAAQNFHKPLFNLMIVGGGRSSYCQVYALKLQDFRI