; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg04221 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg04221
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionU11/U12 small nuclear ribonucleoprotein 25 kDa protein, putative
Genome locationCarg_Chr01:685886..688470
RNA-Seq ExpressionCarg04221
SyntenyCarg04221
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0005689 - U12-type spliceosomal complex (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR029071 - Ubiquitin-like domain superfamily
IPR039690 - U11/U12 small nuclear ribonucleoprotein 25kDa protein
IPR040610 - SNRNP25, ubiquitin-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022153470.1 uncharacterized protein LOC111020973 isoform X1 [Momordica charantia]8.7e-10981.74Show/hide
Query:  MRRIGGPRERSKIGNLWRFNRFIDNRCLAPLTLDGDGDVDALRRRPYRLLPRLELIDLFVLKLDGSVFGVRVARNGTVADLKQAIEEVFDSPGASEHCKI
        M RIGG RERSKIGNLWRFNRFID RCLAP TLDGDGDVDAL R PYRLLPR +LIDLFVLKLDGSVFGVRVARNGTVA+LK+AIEEVF SPG  EHCKI
Subjt:  MRRIGGPRERSKIGNLWRFNRFIDNRCLAPLTLDGDGDVDALRRRPYRLLPRLELIDLFVLKLDGSVFGVRVARNGTVADLKQAIEEVFDSPGASEHCKI

Query:  TWSLVWGHFCLCYEGEKLIDDKAYIRVVGIKDGDQLQFIRHMSINCLPMKRDRKNQAVPCKTVLFLPAESKSIEGNQVAGQGDPVNY-EVHEDGSNQEEI
        TWSLVWGHFCLCYEG+ LIDDKA IRV GIKDGDQLQFIRHMSI+CLP+KRDRK+Q V C+TVLFLP ESK +E NQ+AG  DP  Y EVHEDGSNQEE+
Subjt:  TWSLVWGHFCLCYEGEKLIDDKAYIRVVGIKDGDQLQFIRHMSINCLPMKRDRKNQAVPCKTVLFLPAESKSIEGNQVAGQGDPVNY-EVHEDGSNQEEI

Query:  PMAGFQLANIFRGRVLYSKIWGFFRSASEGRNRPSSGFCIT
        P+ GF LAN FRGR LYS+IWGF +SASEGRNRP SGF IT
Subjt:  PMAGFQLANIFRGRVLYSKIWGFFRSASEGRNRPSSGFCIT

XP_022948349.1 uncharacterized protein LOC111452053 [Cucurbita moschata]8.0e-139100Show/hide
Query:  MRRIGGPRERSKIGNLWRFNRFIDNRCLAPLTLDGDGDVDALRRRPYRLLPRLELIDLFVLKLDGSVFGVRVARNGTVADLKQAIEEVFDSPGASEHCKI
        MRRIGGPRERSKIGNLWRFNRFIDNRCLAPLTLDGDGDVDALRRRPYRLLPRLELIDLFVLKLDGSVFGVRVARNGTVADLKQAIEEVFDSPGASEHCKI
Subjt:  MRRIGGPRERSKIGNLWRFNRFIDNRCLAPLTLDGDGDVDALRRRPYRLLPRLELIDLFVLKLDGSVFGVRVARNGTVADLKQAIEEVFDSPGASEHCKI

Query:  TWSLVWGHFCLCYEGEKLIDDKAYIRVVGIKDGDQLQFIRHMSINCLPMKRDRKNQAVPCKTVLFLPAESKSIEGNQVAGQGDPVNYEVHEDGSNQEEIP
        TWSLVWGHFCLCYEGEKLIDDKAYIRVVGIKDGDQLQFIRHMSINCLPMKRDRKNQAVPCKTVLFLPAESKSIEGNQVAGQGDPVNYEVHEDGSNQEEIP
Subjt:  TWSLVWGHFCLCYEGEKLIDDKAYIRVVGIKDGDQLQFIRHMSINCLPMKRDRKNQAVPCKTVLFLPAESKSIEGNQVAGQGDPVNYEVHEDGSNQEEIP

Query:  MAGFQLANIFRGRVLYSKIWGFFRSASEGRNRPSSGFCIT
        MAGFQLANIFRGRVLYSKIWGFFRSASEGRNRPSSGFCIT
Subjt:  MAGFQLANIFRGRVLYSKIWGFFRSASEGRNRPSSGFCIT

XP_022998358.1 uncharacterized protein LOC111493024 [Cucurbita maxima]1.5e-13799.17Show/hide
Query:  MRRIGGPRERSKIGNLWRFNRFIDNRCLAPLTLDGDGDVDALRRRPYRLLPRLELIDLFVLKLDGSVFGVRVARNGTVADLKQAIEEVFDSPGASEHCKI
        MRRIGGPRERSKIGNLWRFNRFIDNRCLAPLTLDGDGDVDALRRRPYRLLPRLELIDLFVLKLDGSVFGVRVARNGTVADLKQAIEEVFDSP ASEHCKI
Subjt:  MRRIGGPRERSKIGNLWRFNRFIDNRCLAPLTLDGDGDVDALRRRPYRLLPRLELIDLFVLKLDGSVFGVRVARNGTVADLKQAIEEVFDSPGASEHCKI

Query:  TWSLVWGHFCLCYEGEKLIDDKAYIRVVGIKDGDQLQFIRHMSINCLPMKRDRKNQAVPCKTVLFLPAESKSIEGNQVAGQGDPVNYEVHEDGSNQEEIP
        TWSLVWGHFCLCYEGEKLIDDKAYIRVVGIKDGDQLQFIRHMSINCLPMKRDRKNQAVPCKTVLFLPAESKSIEGNQVAGQGDPVNYEVHEDGSNQEEIP
Subjt:  TWSLVWGHFCLCYEGEKLIDDKAYIRVVGIKDGDQLQFIRHMSINCLPMKRDRKNQAVPCKTVLFLPAESKSIEGNQVAGQGDPVNYEVHEDGSNQEEIP

Query:  MAGFQLANIFRGRVLYSKIWGFFRSASEGRNRPSSGFCIT
        MAGFQLANIFRGR+LYSKIWGFFRSASEGRNRPSSGFCIT
Subjt:  MAGFQLANIFRGRVLYSKIWGFFRSASEGRNRPSSGFCIT

XP_023525469.1 uncharacterized protein LOC111789062 [Cucurbita pepo subsp. pepo]2.0e-13798.33Show/hide
Query:  MRRIGGPRERSKIGNLWRFNRFIDNRCLAPLTLDGDGDVDALRRRPYRLLPRLELIDLFVLKLDGSVFGVRVARNGTVADLKQAIEEVFDSPGASEHCKI
        MRRIGGPRERSKIGNLWRFNRFIDNRCLAPLTLDGDGDVDALRRRPYRLLPRLELIDLFVLKLDGSVFGVRVARNGTVADLKQAIEEVFDSPGASEHCKI
Subjt:  MRRIGGPRERSKIGNLWRFNRFIDNRCLAPLTLDGDGDVDALRRRPYRLLPRLELIDLFVLKLDGSVFGVRVARNGTVADLKQAIEEVFDSPGASEHCKI

Query:  TWSLVWGHFCLCYEGEKLIDDKAYIRVVGIKDGDQLQFIRHMSINCLPMKRDRKNQAVPCKTVLFLPAESKSIEGNQVAGQGDPVNYEVHEDGSNQEEIP
        TWSLVWGHFCLCYEGEKLIDDKAYIRVVGIKDGDQLQF+RHMSINCLPMKRDRKNQAVPCKTVLFLPAE KSIEGNQVAGQGDPVNYEVHEDGSNQEEIP
Subjt:  TWSLVWGHFCLCYEGEKLIDDKAYIRVVGIKDGDQLQFIRHMSINCLPMKRDRKNQAVPCKTVLFLPAESKSIEGNQVAGQGDPVNYEVHEDGSNQEEIP

Query:  MAGFQLANIFRGRVLYSKIWGFFRSASEGRNRPSSGFCIT
        MAGFQLANIFRGR+LYSKIWGFFRSASEGRNRPS+GFCIT
Subjt:  MAGFQLANIFRGRVLYSKIWGFFRSASEGRNRPSSGFCIT

XP_038904269.1 uncharacterized protein LOC120090621 isoform X1 [Benincasa hispida]1.3e-10176.64Show/hide
Query:  MRRIGGPRERSKIGNLWRFNRFIDNRCLA-PLTLDGDGDVDALRRRPYRLLPRLELIDLFVLKLDGSVFGVRVARNGTVADLKQAIEEVFDSPGASEHCK
        M  I    ER+KIGNLWRF+RF+D RCLA P TLD D D  AL RRPYRLLPR +LIDLFVLKLDGSVFG+RV+RN TVADLK+AIEEVFDSPG SEHCK
Subjt:  MRRIGGPRERSKIGNLWRFNRFIDNRCLA-PLTLDGDGDVDALRRRPYRLLPRLELIDLFVLKLDGSVFGVRVARNGTVADLKQAIEEVFDSPGASEHCK

Query:  ITWSLVWGHFCLCYEGEKLIDDKAYIRVVGIKDGDQLQFIRHMSINCLPMKRDRKNQAVPCKTVLFLPAESKSIEGNQVAGQGDPVNYEVHEDGSNQEEI
        ITWSL+WGHFCLCYEGEKLIDDK  IRV GIKDGDQLQF+RHMSINCLP+KRD KNQ+V CKT+L L  ESKS+E NQ AGQ D  NY+VH  GSNQEE+
Subjt:  ITWSLVWGHFCLCYEGEKLIDDKAYIRVVGIKDGDQLQFIRHMSINCLPMKRDRKNQAVPCKTVLFLPAESKSIEGNQVAGQGDPVNYEVHEDGSNQEEI

Query:  ---PMAGFQLANIFRGRVLYSKIWGFFRSASEGRNRPSSGFCIT
             AGFQLAN FRGRVLYS+IWGF +SASEGRNRPSSGF IT
Subjt:  ---PMAGFQLANIFRGRVLYSKIWGFFRSASEGRNRPSSGFCIT

TrEMBL top hitse value%identityAlignment
A0A0A0KTJ1 Ubiquitin_4 domain-containing protein4.1e-9673.93Show/hide
Query:  ERSKIGNLWRFNRFIDNRCLAPLTLDGDGDVDALRRRPYRLLPRLELIDLFVLKLDGSVFGVRVARNGTVADLKQAIEEVFDSPGASEHCKITWSLVWGH
        +R+KI NLWRF RFID RC AP TLD D D DAL RRPYRLLPR + IDLFVLKLDGSVFG+RV+RN TVADLK+AIE+VFDSPG SEH KITWSL+WGH
Subjt:  ERSKIGNLWRFNRFIDNRCLAPLTLDGDGDVDALRRRPYRLLPRLELIDLFVLKLDGSVFGVRVARNGTVADLKQAIEEVFDSPGASEHCKITWSLVWGH

Query:  FCLCYEGEKLIDDKAYIRVVGIKDGDQLQFIRHMSINCLPMKRDRKNQAVPCKTVLFLPAESKSIEGNQVAGQGDPVNYEVHEDGSNQEE---IPMAGFQ
        FCLCYEGEKLIDDK  I+  GIKDGDQLQFIRHMSINCL MK+DRKNQ VPCK +LFL  ESK++E NQ  GQ D  +Y+VH D SN+EE   +  AGFQ
Subjt:  FCLCYEGEKLIDDKAYIRVVGIKDGDQLQFIRHMSINCLPMKRDRKNQAVPCKTVLFLPAESKSIEGNQVAGQGDPVNYEVHEDGSNQEE---IPMAGFQ

Query:  LANIFRGRVLYSKIWGFFRSASEGRNRPSSGFCI
        LAN+F+GRVLYS+IWGF +SASEGRNR SS F I
Subjt:  LANIFRGRVLYSKIWGFFRSASEGRNRPSSGFCI

A0A1S3BY00 uncharacterized protein LOC103494657 isoform X12.6e-9573.5Show/hide
Query:  ERSKIGNLWRFNRFIDNRCLAPLTLDGDGDVDALRRRPYRLLPRLELIDLFVLKLDGSVFGVRVARNGTVADLKQAIEEVFDSPGASEHCKITWSLVWGH
        +R+KI NLWRF RFID RC AP TLD + D DAL RRPYRLLPR +LIDLFVLKLDGSVFGVRV+RN TVADLK+AIEEVFDSPG SEH KITWSL+WGH
Subjt:  ERSKIGNLWRFNRFIDNRCLAPLTLDGDGDVDALRRRPYRLLPRLELIDLFVLKLDGSVFGVRVARNGTVADLKQAIEEVFDSPGASEHCKITWSLVWGH

Query:  FCLCYEGEKLIDDKAYIRVVGIKDGDQLQFIRHMSINCLPMKRDRKNQAVPCKTVLFLPAESKSIEGNQVAGQGDPVNYEVHEDGSNQEEI---PMAGFQ
        FCLCYEGEKL DDKA IR   IKDGDQLQFIRHMSINCL MK+DRKNQ VPCKT+LF   ESK++E NQ  G+ D  +Y+VH D SNQEE+     A FQ
Subjt:  FCLCYEGEKLIDDKAYIRVVGIKDGDQLQFIRHMSINCLPMKRDRKNQAVPCKTVLFLPAESKSIEGNQVAGQGDPVNYEVHEDGSNQEEI---PMAGFQ

Query:  LANIFRGRVLYSKIWGFFRSASEGRNRPSSGFCI
        L+N F+GRVLYS++WGF +SASEGRNR SS F I
Subjt:  LANIFRGRVLYSKIWGFFRSASEGRNRPSSGFCI

A0A6J1DGY1 uncharacterized protein LOC111020973 isoform X14.2e-10981.74Show/hide
Query:  MRRIGGPRERSKIGNLWRFNRFIDNRCLAPLTLDGDGDVDALRRRPYRLLPRLELIDLFVLKLDGSVFGVRVARNGTVADLKQAIEEVFDSPGASEHCKI
        M RIGG RERSKIGNLWRFNRFID RCLAP TLDGDGDVDAL R PYRLLPR +LIDLFVLKLDGSVFGVRVARNGTVA+LK+AIEEVF SPG  EHCKI
Subjt:  MRRIGGPRERSKIGNLWRFNRFIDNRCLAPLTLDGDGDVDALRRRPYRLLPRLELIDLFVLKLDGSVFGVRVARNGTVADLKQAIEEVFDSPGASEHCKI

Query:  TWSLVWGHFCLCYEGEKLIDDKAYIRVVGIKDGDQLQFIRHMSINCLPMKRDRKNQAVPCKTVLFLPAESKSIEGNQVAGQGDPVNY-EVHEDGSNQEEI
        TWSLVWGHFCLCYEG+ LIDDKA IRV GIKDGDQLQFIRHMSI+CLP+KRDRK+Q V C+TVLFLP ESK +E NQ+AG  DP  Y EVHEDGSNQEE+
Subjt:  TWSLVWGHFCLCYEGEKLIDDKAYIRVVGIKDGDQLQFIRHMSINCLPMKRDRKNQAVPCKTVLFLPAESKSIEGNQVAGQGDPVNY-EVHEDGSNQEEI

Query:  PMAGFQLANIFRGRVLYSKIWGFFRSASEGRNRPSSGFCIT
        P+ GF LAN FRGR LYS+IWGF +SASEGRNRP SGF IT
Subjt:  PMAGFQLANIFRGRVLYSKIWGFFRSASEGRNRPSSGFCIT

A0A6J1G9M5 uncharacterized protein LOC1114520533.9e-139100Show/hide
Query:  MRRIGGPRERSKIGNLWRFNRFIDNRCLAPLTLDGDGDVDALRRRPYRLLPRLELIDLFVLKLDGSVFGVRVARNGTVADLKQAIEEVFDSPGASEHCKI
        MRRIGGPRERSKIGNLWRFNRFIDNRCLAPLTLDGDGDVDALRRRPYRLLPRLELIDLFVLKLDGSVFGVRVARNGTVADLKQAIEEVFDSPGASEHCKI
Subjt:  MRRIGGPRERSKIGNLWRFNRFIDNRCLAPLTLDGDGDVDALRRRPYRLLPRLELIDLFVLKLDGSVFGVRVARNGTVADLKQAIEEVFDSPGASEHCKI

Query:  TWSLVWGHFCLCYEGEKLIDDKAYIRVVGIKDGDQLQFIRHMSINCLPMKRDRKNQAVPCKTVLFLPAESKSIEGNQVAGQGDPVNYEVHEDGSNQEEIP
        TWSLVWGHFCLCYEGEKLIDDKAYIRVVGIKDGDQLQFIRHMSINCLPMKRDRKNQAVPCKTVLFLPAESKSIEGNQVAGQGDPVNYEVHEDGSNQEEIP
Subjt:  TWSLVWGHFCLCYEGEKLIDDKAYIRVVGIKDGDQLQFIRHMSINCLPMKRDRKNQAVPCKTVLFLPAESKSIEGNQVAGQGDPVNYEVHEDGSNQEEIP

Query:  MAGFQLANIFRGRVLYSKIWGFFRSASEGRNRPSSGFCIT
        MAGFQLANIFRGRVLYSKIWGFFRSASEGRNRPSSGFCIT
Subjt:  MAGFQLANIFRGRVLYSKIWGFFRSASEGRNRPSSGFCIT

A0A6J1KGI2 uncharacterized protein LOC1114930247.3e-13899.17Show/hide
Query:  MRRIGGPRERSKIGNLWRFNRFIDNRCLAPLTLDGDGDVDALRRRPYRLLPRLELIDLFVLKLDGSVFGVRVARNGTVADLKQAIEEVFDSPGASEHCKI
        MRRIGGPRERSKIGNLWRFNRFIDNRCLAPLTLDGDGDVDALRRRPYRLLPRLELIDLFVLKLDGSVFGVRVARNGTVADLKQAIEEVFDSP ASEHCKI
Subjt:  MRRIGGPRERSKIGNLWRFNRFIDNRCLAPLTLDGDGDVDALRRRPYRLLPRLELIDLFVLKLDGSVFGVRVARNGTVADLKQAIEEVFDSPGASEHCKI

Query:  TWSLVWGHFCLCYEGEKLIDDKAYIRVVGIKDGDQLQFIRHMSINCLPMKRDRKNQAVPCKTVLFLPAESKSIEGNQVAGQGDPVNYEVHEDGSNQEEIP
        TWSLVWGHFCLCYEGEKLIDDKAYIRVVGIKDGDQLQFIRHMSINCLPMKRDRKNQAVPCKTVLFLPAESKSIEGNQVAGQGDPVNYEVHEDGSNQEEIP
Subjt:  TWSLVWGHFCLCYEGEKLIDDKAYIRVVGIKDGDQLQFIRHMSINCLPMKRDRKNQAVPCKTVLFLPAESKSIEGNQVAGQGDPVNYEVHEDGSNQEEIP

Query:  MAGFQLANIFRGRVLYSKIWGFFRSASEGRNRPSSGFCIT
        MAGFQLANIFRGR+LYSKIWGFFRSASEGRNRPSSGFCIT
Subjt:  MAGFQLANIFRGRVLYSKIWGFFRSASEGRNRPSSGFCIT

SwissProt top hitse value%identityAlignment
Q3ZBQ4 U11/U12 small nuclear ribonucleoprotein 25 kDa protein2.1e-0939.08Show/hide
Query:  VLKLDGSVFGVRVARNGTVADLKQAIEEVF----DSPGASEHCKITWSLVWGHFCLCYEGEKLIDDKAYIRVVGIKDGDQLQFIRHM
        V K+DG V  V V +N TV DLK+AI+       +  G  +H  I+WS VW  + L   GEKL +D+  +R  GI++ D++ FI+ +
Subjt:  VLKLDGSVFGVRVARNGTVADLKQAIEEVF----DSPGASEHCKITWSLVWGHFCLCYEGEKLIDDKAYIRVVGIKDGDQLQFIRHM

Q84WS8 U11/U12 small nuclear ribonucleoprotein 25 kDa protein4.3e-1035.45Show/hide
Query:  LFVLKLDGSVFGVRVARNGTVADLKQAIEEVFDSPGASE--HCKITWSLVWGHFCLCYEGEKLIDDKAYIRVVGIKDGDQLQFIRHMSINCLPMKRDRKN
        L V+KLDGS   V V  + T+ DLK  I++  +    +   H  I+W  VW +FCL    EKL+DD A ++ VGI++  Q+ F+ ++      MK+ R  
Subjt:  LFVLKLDGSVFGVRVARNGTVADLKQAIEEVFDSPGASE--HCKITWSLVWGHFCLCYEGEKLIDDKAYIRVVGIKDGDQLQFIRHMSINCLPMKRDRKN

Query:  QAVPCKTVLF
         +   K  LF
Subjt:  QAVPCKTVLF

Q8VIK1 U11/U12 small nuclear ribonucleoprotein 25 kDa protein2.1e-0939.08Show/hide
Query:  VLKLDGSVFGVRVARNGTVADLKQAIEEVF----DSPGASEHCKITWSLVWGHFCLCYEGEKLIDDKAYIRVVGIKDGDQLQFIRHM
        V K+DG V  V V +N TV DLK+AI+       +  G  +H  I+WS VW  + L   GEKL +D+  +R  GI++ D++ FI+ +
Subjt:  VLKLDGSVFGVRVARNGTVADLKQAIEEVF----DSPGASEHCKITWSLVWGHFCLCYEGEKLIDDKAYIRVVGIKDGDQLQFIRHM

Q9BV90 U11/U12 small nuclear ribonucleoprotein 25 kDa protein8.1e-0937.93Show/hide
Query:  VLKLDGSVFGVRVARNGTVADLKQAIEEVF----DSPGASEHCKITWSLVWGHFCLCYEGEKLIDDKAYIRVVGIKDGDQLQFIRHM
        V K+DG V  V V ++ TV DLK+AI+       +  G  +H  I+WS VW  + L   GEKL +D+  +R  GI++ D++ FI+ +
Subjt:  VLKLDGSVFGVRVARNGTVADLKQAIEEVF----DSPGASEHCKITWSLVWGHFCLCYEGEKLIDDKAYIRVVGIKDGDQLQFIRHM

Arabidopsis top hitse value%identityAlignment
AT1G80060.1 Ubiquitin-like superfamily protein7.2e-3739.72Show/hide
Query:  IDNRCLAPLTLDGDGDVDALRRRPYRLLPRLELIDLFVLKLDGSVFGVRVARNGTVADLKQAIEEVFDSPGASEHCKITWSLVWGHFCLCYEGEKLIDDK
        ID R L+   L+  G +   RR  Y  LP    I L V+KL+GS+F V VA++ +VA+LK+A+E+VF       H  I+WS VWGHFCLCY  ++L++DK
Subjt:  IDNRCLAPLTLDGDGDVDALRRRPYRLLPRLELIDLFVLKLDGSVFGVRVARNGTVADLKQAIEEVFDSPGASEHCKITWSLVWGHFCLCYEGEKLIDDK

Query:  AYIRVVGIKDGDQLQFIRHMSINCLPMKRDRKNQAVPCKTVLFLPAESKSIEGNQVAGQGDPVNYEVHED--GSNQEEIPMAGFQLANIFRGRVLYSKIW
          IR +G+ DGDQL F+RH+SI+  PM  ++++++  CK  L L   S  +   Q+  Q      +V E      Q+E+P A  +L N+ +G + Y+  W
Subjt:  AYIRVVGIKDGDQLQFIRHMSINCLPMKRDRKNQAVPCKTVLFLPAESKSIEGNQVAGQGDPVNYEVHED--GSNQEEIPMAGFQLANIFRGRVLYSKIW

Query:  GFFRSASEGRNRPS
        G  R   E R+ PS
Subjt:  GFFRSASEGRNRPS

AT3G07860.1 Ubiquitin-like superfamily protein3.1e-1135.45Show/hide
Query:  LFVLKLDGSVFGVRVARNGTVADLKQAIEEVFDSPGASE--HCKITWSLVWGHFCLCYEGEKLIDDKAYIRVVGIKDGDQLQFIRHMSINCLPMKRDRKN
        L V+KLDGS   V V  + T+ DLK  I++  +    +   H  I+W  VW +FCL    EKL+DD A ++ VGI++  Q+ F+ ++      MK+ R  
Subjt:  LFVLKLDGSVFGVRVARNGTVADLKQAIEEVFDSPGASE--HCKITWSLVWGHFCLCYEGEKLIDDKAYIRVVGIKDGDQLQFIRHMSINCLPMKRDRKN

Query:  QAVPCKTVLF
         +   K  LF
Subjt:  QAVPCKTVLF

AT4G32270.1 Ubiquitin-like superfamily protein2.4e-2446.51Show/hide
Query:  LAPLTLDGDGDVDALRRR---PYRLLPRLELIDLFVLKLDGSVFGVRVARNGTVADLKQAIEEVFDSPGASEHCKITWSLVWGHFCLCYEGEKLIDDKAY
        L+PL L     +D L RR    Y  +P  E I L VLKLDGS FG++V +  TV +LK A+E  F     S   KI+W  VWG FCL YE ++LI++  Y
Subjt:  LAPLTLDGDGDVDALRRR---PYRLLPRLELIDLFVLKLDGSVFGVRVARNGTVADLKQAIEEVFDSPGASEHCKITWSLVWGHFCLCYEGEKLIDDKAY

Query:  IRVVGIKDGDQLQFIRHMSINCLPMKRDR
        +   GIKDGDQL+FIRH+S  C+ M + +
Subjt:  IRVVGIKDGDQLQFIRHMSINCLPMKRDR

AT4G32270.2 Ubiquitin-like superfamily protein6.1e-2049Show/hide
Query:  ELIDLFVLKLDGSVFGVRVARNGTVADLKQAIEEVFDSPGASEHCKITWSLVWGHFCLCYEGEKLIDDKAYIRVVGIKDGDQLQFIRHMSINCLPMKRDR
        E I L VLKLDGS F   V +  TV +LK A+E  F     S   KI+W  VWG FCL YE ++LI++  Y+   GIKDGDQL+FIRH+S  C+ M + +
Subjt:  ELIDLFVLKLDGSVFGVRVARNGTVADLKQAIEEVFDSPGASEHCKITWSLVWGHFCLCYEGEKLIDDKAYIRVVGIKDGDQLQFIRHMSINCLPMKRDR

AT5G25340.1 Ubiquitin-like superfamily protein1.2e-2050.96Show/hide
Query:  YRLLPRLELIDLFVLKLDGSVFGVRVARNGTVADLKQAIEEVFDSPGASEHCKITWSLVWGHFCLCYEGEKLIDDKAYIRVVGIKDGDQLQFIRHMSINC
        Y  LP  E I L VLKLDGS F V V  + TV DLK AIE  F         KI+WS VWGHFCLC+ G+KLI D   I   G+KDGD+++F  H+S N 
Subjt:  YRLLPRLELIDLFVLKLDGSVFGVRVARNGTVADLKQAIEEVFDSPGASEHCKITWSLVWGHFCLCYEGEKLIDDKAYIRVVGIKDGDQLQFIRHMSINC

Query:  LPMK
        +  K
Subjt:  LPMK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAAGGATTGGCGGTCCCCGAGAGAGGAGTAAGATCGGTAACTTATGGCGTTTCAACCGCTTCATTGATAACCGGTGCTTGGCTCCGCTTACGCTCGACGGAGACGG
TGATGTTGACGCTCTCAGACGGCGGCCTTATCGGTTGCTTCCTCGGCTGGAGCTCATTGATCTCTTTGTTCTCAAGCTCGACGGCTCTGTATTTGGTGTTCGTGTAGCGC
GCAATGGTACAGTAGCAGATCTCAAACAAGCGATAGAGGAAGTTTTTGATTCACCCGGGGCGAGCGAACACTGCAAGATTACATGGTCACTTGTCTGGGGACATTTCTGC
TTATGTTATGAAGGCGAAAAGCTTATTGATGACAAGGCATACATTAGAGTTGTAGGCATCAAAGATGGTGATCAGCTTCAGTTTATTAGGCATATGTCTATCAACTGTCT
ACCAATGAAGAGAGATAGGAAGAACCAAGCCGTTCCTTGCAAAACAGTGTTGTTTCTGCCAGCAGAATCAAAATCTATTGAAGGGAATCAAGTAGCTGGTCAAGGCGATC
CCGTGAATTATGAAGTTCACGAGGACGGTTCCAACCAGGAGGAGATTCCTATGGCTGGATTTCAGCTAGCAAATATCTTTAGAGGACGGGTATTATATTCCAAGATATGG
GGGTTTTTTAGAAGTGCATCAGAAGGCAGGAATAGGCCTTCTTCCGGTTTCTGCATTACTTGA
mRNA sequenceShow/hide mRNA sequence
TCCATTGCGTAACGGTCCTCTCCTCTCTATTTGAAAGCTCAGAACCAACCAACAAACAAACTTCCCCGAAATCCCTCCATTTTTCTTCCCTCGTCTTTTCCGATTTCAAA
TTCTCGATCTCACTCAAACCCTAGCTGCTTCAGAGCCCTAGGATGCGAAGGATTGGCGGTCCCCGAGAGAGGAGTAAGATCGGTAACTTATGGCGTTTCAACCGCTTCAT
TGATAACCGGTGCTTGGCTCCGCTTACGCTCGACGGAGACGGTGATGTTGACGCTCTCAGACGGCGGCCTTATCGGTTGCTTCCTCGGCTGGAGCTCATTGATCTCTTTG
TTCTCAAGCTCGACGGCTCTGTATTTGGTGTTCGTGTAGCGCGCAATGGTACAGTAGCAGATCTCAAACAAGCGATAGAGGAAGTTTTTGATTCACCCGGGGCGAGCGAA
CACTGCAAGATTACATGGTCACTTGTCTGGGGACATTTCTGCTTATGTTATGAAGGCGAAAAGCTTATTGATGACAAGGCATACATTAGAGTTGTAGGCATCAAAGATGG
TGATCAGCTTCAGTTTATTAGGCATATGTCTATCAACTGTCTACCAATGAAGAGAGATAGGAAGAACCAAGCCGTTCCTTGCAAAACAGTGTTGTTTCTGCCAGCAGAAT
CAAAATCTATTGAAGGGAATCAAGTAGCTGGTCAAGGCGATCCCGTGAATTATGAAGTTCACGAGGACGGTTCCAACCAGGAGGAGATTCCTATGGCTGGATTTCAGCTA
GCAAATATCTTTAGAGGACGGGTATTATATTCCAAGATATGGGGGTTTTTTAGAAGTGCATCAGAAGGCAGGAATAGGCCTTCTTCCGGTTTCTGCATTACTTGACTTAG
CAAATGGACATGGAATAACACAAGCTGCAAGGTAAATTAGCCTAGCCATTTGAAGTTATGAAACAATTTGTGTGCTATTCTCTGTCTTTTGTTTGCCATTAACTAAGTGG
CCACCGGAACTAGGATGTGCAGAGATTGAAACTTTAGCATTTGATTTATGAACATGACAAGTTAGATTCTAGAATAAAGAAGTGAGAGAGAAAAGATTGACTCTGACATG
TATATATCAGACTGGATTTGTTGTTGGATGTTTCTGTATAAAGTTCTTTTACTTCCCTTCCAACTCTCCTCTTTCAATCTCCTGTGGTTCCACTGAACTTAGAAGCAATT
TTCTTAAGTTAATGTGGAGAGGAAG
Protein sequenceShow/hide protein sequence
MRRIGGPRERSKIGNLWRFNRFIDNRCLAPLTLDGDGDVDALRRRPYRLLPRLELIDLFVLKLDGSVFGVRVARNGTVADLKQAIEEVFDSPGASEHCKITWSLVWGHFC
LCYEGEKLIDDKAYIRVVGIKDGDQLQFIRHMSINCLPMKRDRKNQAVPCKTVLFLPAESKSIEGNQVAGQGDPVNYEVHEDGSNQEEIPMAGFQLANIFRGRVLYSKIW
GFFRSASEGRNRPSSGFCIT